| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226223071
Identifier: 226223071
GI number: 226223071
Start: 478574
End: 479077
Strand: Direct
Name: 226223071
Synonym: Lm4b_00467
Alternate gene names: NA
Gene position: 478574-479077 (Clockwise)
Preceding gene: 226223069
Following gene: 226223073
Centisome position: 16.43
GC content: 32.54
Gene sequence:
>504_bases ATGACAAACAGAACATTAACAACCAAGTTACTAGGAACACTAAGCTATACGCAAGAAAATGGAACGATGATGGACGCCGT AATTCCTTTGGATGGCAAAGAAGTAAAGGTTGATTATAGTATTTTTGAAAAGCTTACTTCAGAAGATTATTTTAAAGATA TCGTTACTTTAACGGATCAAATTCCGGAATTACACCTAGAAGCGAAAAAAACTATTTTAGAGCAATTTGATGGAAATGAT ACGCTTACTATTTATTTTGATTTTCATACAGATGAATTGCCCGAAGCGGTTTTAGAAGTTACCGAATGTGATGCGCTAGA AAATATAACAAAGGAAATCTTAATCGATAAACTAGTTTTGTCAGGCGTTTGGTTTTCGGAAAATGCCAATAATGAGTTGG ATTTAACATTCGATTTCAAACTATTACCAGAAGTTAGCGATGAACTTTTAGTTGTTCGTTTTAATACAAAAGGAGAAATT ACTGAATTAACCCATGAAAGTTAA
Upstream 100 bases:
>100_bases TAGTTTCCCTGAAAGCAGTGCTGCGAAACAAGTTGCGGATCAAAGTGAGTTTAAGTTATACTGAGCGTATGCAAGCTACT ATTTCTAGGAGGCACCGAAC
Downstream 100 bases:
>100_bases CAAAAAAGAGCCATTCTGTTCGCGAACAGAATGGCTCTTTTTTATTTATACATACTTTCAATAACTGGTTTTAGCTTATC AATTACAAGTCCGCTACCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MTNRTLTTKLLGTLSYTQENGTMMDAVIPLDGKEVKVDYSIFEKLTSEDYFKDIVTLTDQIPELHLEAKKTILEQFDGND TLTIYFDFHTDELPEAVLEVTECDALENITKEILIDKLVLSGVWFSENANNELDLTFDFKLLPEVSDELLVVRFNTKGEI TELTHES
Sequences:
>Translated_167_residues MTNRTLTTKLLGTLSYTQENGTMMDAVIPLDGKEVKVDYSIFEKLTSEDYFKDIVTLTDQIPELHLEAKKTILEQFDGND TLTIYFDFHTDELPEAVLEVTECDALENITKEILIDKLVLSGVWFSENANNELDLTFDFKLLPEVSDELLVVRFNTKGEI TELTHES >Mature_166_residues TNRTLTTKLLGTLSYTQENGTMMDAVIPLDGKEVKVDYSIFEKLTSEDYFKDIVTLTDQIPELHLEAKKTILEQFDGNDT LTIYFDFHTDELPEAVLEVTECDALENITKEILIDKLVLSGVWFSENANNELDLTFDFKLLPEVSDELLVVRFNTKGEIT ELTHES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19074; Mature: 18942
Theoretical pI: Translated: 3.95; Mature: 3.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNRTLTTKLLGTLSYTQENGTMMDAVIPLDGKEVKVDYSIFEKLTSEDYFKDIVTLTDQ CCCCHHHHHHHHHHEEECCCCEEEEEEECCCCCEEEEHHHHHHHHCCHHHHHHHHHHHHH IPELHLEAKKTILEQFDGNDTLTIYFDFHTDELPEAVLEVTECDALENITKEILIDKLVL CCHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGVWFSENANNELDLTFDFKLLPEVSDELLVVRFNTKGEITELTHES HCEEECCCCCCEEEEEEEEEECCCCCCCEEEEEECCCCCEEECCCCC >Mature Secondary Structure TNRTLTTKLLGTLSYTQENGTMMDAVIPLDGKEVKVDYSIFEKLTSEDYFKDIVTLTDQ CCCHHHHHHHHHHEEECCCCEEEEEEECCCCCEEEEHHHHHHHHCCHHHHHHHHHHHHH IPELHLEAKKTILEQFDGNDTLTIYFDFHTDELPEAVLEVTECDALENITKEILIDKLVL CCHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGVWFSENANNELDLTFDFKLLPEVSDELLVVRFNTKGEITELTHES HCEEECCCCCCEEEEEEEEEECCCCCCCEEEEEECCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA