| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226223060
Identifier: 226223060
GI number: 226223060
Start: 465822
End: 466304
Strand: Direct
Name: 226223060
Synonym: Lm4b_00455
Alternate gene names: NA
Gene position: 465822-466304 (Clockwise)
Preceding gene: 226223059
Following gene: 226223061
Centisome position: 15.99
GC content: 30.23
Gene sequence:
>483_bases ATGCTTGACAAACAACAACTATATATTGTAGAAAACAAAGACATACCTAATTATGAAGTTGACTCTGGAATTACTGGAGC AGAACAAAATTATATTTATAATTTTAAAAATCCAATCCCTATTTCTGAACAAGAATTACAAGACATTTGTGATACTTTTG GTGAGTTTATGGTTTCTGCTTATTTTTTAGTGGATATATTTGGGCCGTATGAGGAATTACCTGGAGACAAAAAGAATGGC TATAAAAAAGTTGTTCTTGCAGATGAATCTATGGAGATAAAGAAAAAGATGTTTCATTTGTTTTTAGAAGGTGATGCTTA TCCAGACGCAAACAAAATATTTTTGTTCAAGGAGAAAAAAGAATTAAATGCTAGAAAAAACATGGAAATAGAAGATGGAA TGATAGTGATTTCTCCTGTTTTAGATGTTACTGCTATAGGCATATTTTCAAAAGGAATAGATTTGGCGCAGTTTTTCAAG TAA
Upstream 100 bases:
>100_bases ACGGAAAAGTTGGTGGAAATCAAAAAAAATATTTACATGTCCACTGGAACTACAAACCAAAGCACTATATAATCTATCCA AGAAAAGGAAGGGGAAAATA
Downstream 100 bases:
>100_bases TCAGAGTGGATGGTATGACTGCGAGAATATTGCCTAAAACATTAAAGATGCTTTGAATAAAGCTCAATTGCTAAAATAAT ATATCTAAATTAGAAATATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MLDKQQLYIVENKDIPNYEVDSGITGAEQNYIYNFKNPIPISEQELQDICDTFGEFMVSAYFLVDIFGPYEELPGDKKNG YKKVVLADESMEIKKKMFHLFLEGDAYPDANKIFLFKEKKELNARKNMEIEDGMIVISPVLDVTAIGIFSKGIDLAQFFK
Sequences:
>Translated_160_residues MLDKQQLYIVENKDIPNYEVDSGITGAEQNYIYNFKNPIPISEQELQDICDTFGEFMVSAYFLVDIFGPYEELPGDKKNG YKKVVLADESMEIKKKMFHLFLEGDAYPDANKIFLFKEKKELNARKNMEIEDGMIVISPVLDVTAIGIFSKGIDLAQFFK >Mature_160_residues MLDKQQLYIVENKDIPNYEVDSGITGAEQNYIYNFKNPIPISEQELQDICDTFGEFMVSAYFLVDIFGPYEELPGDKKNG YKKVVLADESMEIKKKMFHLFLEGDAYPDANKIFLFKEKKELNARKNMEIEDGMIVISPVLDVTAIGIFSKGIDLAQFFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18386; Mature: 18386
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDKQQLYIVENKDIPNYEVDSGITGAEQNYIYNFKNPIPISEQELQDICDTFGEFMVSA CCCCCEEEEEECCCCCCEECCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHH YFLVDIFGPYEELPGDKKNGYKKVVLADESMEIKKKMFHLFLEGDAYPDANKIFLFKEKK HHHHHHCCCHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHEECCCCCCCCCEEEEEECCH ELNARKNMEIEDGMIVISPVLDVTAIGIFSKGIDLAQFFK HCCHHCCCCCCCCEEEEECHHHHHHHHHHHCCCCHHHHCC >Mature Secondary Structure MLDKQQLYIVENKDIPNYEVDSGITGAEQNYIYNFKNPIPISEQELQDICDTFGEFMVSA CCCCCEEEEEECCCCCCEECCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHH YFLVDIFGPYEELPGDKKNGYKKVVLADESMEIKKKMFHLFLEGDAYPDANKIFLFKEKK HHHHHHCCCHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHEECCCCCCCCCEEEEEECCH ELNARKNMEIEDGMIVISPVLDVTAIGIFSKGIDLAQFFK HCCHHCCCCCCCCEEEEECHHHHHHHHHHHCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA