| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226223037
Identifier: 226223037
GI number: 226223037
Start: 435516
End: 435908
Strand: Direct
Name: 226223037
Synonym: Lm4b_00431
Alternate gene names: NA
Gene position: 435516-435908 (Clockwise)
Preceding gene: 226223036
Following gene: 226223038
Centisome position: 14.95
GC content: 32.32
Gene sequence:
>393_bases ATGGATATCGTAACTAATAAAATTGTCGTAGAAAAGTATAATTTTGAAACAATCATGGAAGAAAATGAGCAATTCGAAAA CAAAATTGAATTAGAGGTCCATGAAGTCGAGCCAGTCAATGGAAATGTGGAACTTATGTCAAAAGGAAAAATTTTTAAAA TCACAATTCCTTTTTTATTAGTCCTTGAAAATTTCCGGATTGACGGTAGAATCAGCCGTATTATTCAATTAAAAGACTTT TTTGGAGATTTTTCCGATTTAGAAGCTGTAGATGTTGAAGGCTTATCCAATCCACTAATTGACTACATCAAACGCTTAAC ATATGATGTAACAGAAATCGCATTTGATGAACCGGGAGTTAGCTTGGATTTTAACGCTAATCATAATAGCTAG
Upstream 100 bases:
>100_bases CAGAAGGCAATCGCATCGAAATTACGTGGTAGTATTGATTTGCTAGGAACTTAGTTATCGTGTAATATACGGGGTACATA CTACAAATGAGGTGGATTTT
Downstream 100 bases:
>100_bases TTAGGAGAGAAAATGCGTCAATATATGAAAATGGTACGTCCGTTTGATTTTGTAATTATTATTTTACTAATCTTGGGTTC GTTTTTACCACTAATATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MDIVTNKIVVEKYNFETIMEENEQFENKIELEVHEVEPVNGNVELMSKGKIFKITIPFLLVLENFRIDGRISRIIQLKDF FGDFSDLEAVDVEGLSNPLIDYIKRLTYDVTEIAFDEPGVSLDFNANHNS
Sequences:
>Translated_130_residues MDIVTNKIVVEKYNFETIMEENEQFENKIELEVHEVEPVNGNVELMSKGKIFKITIPFLLVLENFRIDGRISRIIQLKDF FGDFSDLEAVDVEGLSNPLIDYIKRLTYDVTEIAFDEPGVSLDFNANHNS >Mature_130_residues MDIVTNKIVVEKYNFETIMEENEQFENKIELEVHEVEPVNGNVELMSKGKIFKITIPFLLVLENFRIDGRISRIIQLKDF FGDFSDLEAVDVEGLSNPLIDYIKRLTYDVTEIAFDEPGVSLDFNANHNS
Specific function: Unknown
COG id: COG4835
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15016; Mature: 15016
Theoretical pI: Translated: 4.11; Mature: 4.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIVTNKIVVEKYNFETIMEENEQFENKIELEVHEVEPVNGNVELMSKGKIFKITIPFLL CCCCCCEEEEEECCHHHHHHCCHHCCCEEEEEEEEECCCCCCEEEEECCCEEEEEHHHHH VLENFRIDGRISRIIQLKDFFGDFSDLEAVDVEGLSNPLIDYIKRLTYDVTEIAFDEPGV HHHCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHEEECCCCC SLDFNANHNS EEEECCCCCC >Mature Secondary Structure MDIVTNKIVVEKYNFETIMEENEQFENKIELEVHEVEPVNGNVELMSKGKIFKITIPFLL CCCCCCEEEEEECCHHHHHHCCHHCCCEEEEEEEEECCCCCCEEEEECCCEEEEEHHHHH VLENFRIDGRISRIIQLKDFFGDFSDLEAVDVEGLSNPLIDYIKRLTYDVTEIAFDEPGV HHHCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHEEECCCCC SLDFNANHNS EEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA