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The map label for this gene is yeeN [C]

Identifier: 226222996

GI number: 226222996

Start: 398158

End: 398877

Strand: Direct

Name: yeeN [C]

Synonym: Lm4b_00388

Alternate gene names: 226222996

Gene position: 398158-398877 (Clockwise)

Preceding gene: 226222995

Following gene: 226222997

Centisome position: 13.67

GC content: 37.92

Gene sequence:

>720_bases
ATGGGCCGTAAATGGGCAAATATTAAAGAGAAAAAAGCGTCAAAAGATAAAACAAATAGTCGTATCTATGCAAAATTTGG
AATTGAAATATATGTAGCGGCTAAATCGGGCGACCCAGATCCACATTCCAACCAAAAATTACGTTTTGTTATTGAACGTG
CAAAAACATACAATGTGCCGAAACATATTATTGACCGTGCAATCGAAAAAGCGAAAGGCACTGGCGATGAAACATATTCA
GAACTGCGCTATGAAGGCTTTGGTCCAAATGGTTCGATGATTATCGTAGACGCACTGACAAATAATGTGAATCGTACGGC
ATCCGATGTTCGCGCAGCTTATAGCAAAAACGGCGGCAACATGGGCGTAAGTGGTTCAGTAGCTTATATGTTTGATAATA
CAGCCATTTTTGGTGTTGAAGGAAAAGACGCGGATGAGTTATTAGAACTTTTAATGGAAGCGGATATTGATGTTCGTGAT
ATTTTAGACGAAGATGGCCAAGCGATTATTTATGCAGAACCAGAAGATTTCCACAAAGTACAAGAAGGTTTGAAAGCGGC
TGGAATTGAAGAATTTACAGTAGCGGAAATCGAAATGATTCCTCAAAATGATATTCAATTATCAGGTGAGGACTTAGAAA
AATTCGAGAAACTAATTGATGCTTTAGAAGACCTAGAAGACGTGCAAAAAGTATATCATAACGTCGAATTAGAAGATTAA

Upstream 100 bases:

>100_bases
TTTAACGAATATAGCTAAATTTCCACTTAACAAATTCGTTTCCTACACTTATAATAGTACAGAGACACGAGAAAACTCCA
ATTAGAAAGCGAGTGGTAAT

Downstream 100 bases:

>100_bases
CAGCCAACTATTACAACAATCGGAGGAATTGATAAAATGCCAAAATTACCAAATTGCCCAGAATGTAACTCAGAGTATGC
CTACGAAGATCGCGGCTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MGRKWANIKEKKASKDKTNSRIYAKFGIEIYVAAKSGDPDPHSNQKLRFVIERAKTYNVPKHIIDRAIEKAKGTGDETYS
ELRYEGFGPNGSMIIVDALTNNVNRTASDVRAAYSKNGGNMGVSGSVAYMFDNTAIFGVEGKDADELLELLMEADIDVRD
ILDEDGQAIIYAEPEDFHKVQEGLKAAGIEEFTVAEIEMIPQNDIQLSGEDLEKFEKLIDALEDLEDVQKVYHNVELED

Sequences:

>Translated_239_residues
MGRKWANIKEKKASKDKTNSRIYAKFGIEIYVAAKSGDPDPHSNQKLRFVIERAKTYNVPKHIIDRAIEKAKGTGDETYS
ELRYEGFGPNGSMIIVDALTNNVNRTASDVRAAYSKNGGNMGVSGSVAYMFDNTAIFGVEGKDADELLELLMEADIDVRD
ILDEDGQAIIYAEPEDFHKVQEGLKAAGIEEFTVAEIEMIPQNDIQLSGEDLEKFEKLIDALEDLEDVQKVYHNVELED
>Mature_238_residues
GRKWANIKEKKASKDKTNSRIYAKFGIEIYVAAKSGDPDPHSNQKLRFVIERAKTYNVPKHIIDRAIEKAKGTGDETYSE
LRYEGFGPNGSMIIVDALTNNVNRTASDVRAAYSKNGGNMGVSGSVAYMFDNTAIFGVEGKDADELLELLMEADIDVRDI
LDEDGQAIIYAEPEDFHKVQEGLKAAGIEEFTVAEIEMIPQNDIQLSGEDLEKFEKLIDALEDLEDVQKVYHNVELED

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family [H]

Homologues:

Organism=Homo sapiens, GI27545315, Length=243, Percent_Identity=33.3333333333333, Blast_Score=132, Evalue=3e-31,
Organism=Escherichia coli, GI1788294, Length=235, Percent_Identity=62.1276595744681, Blast_Score=314, Evalue=4e-87,
Organism=Escherichia coli, GI1788171, Length=238, Percent_Identity=39.4957983193277, Blast_Score=177, Evalue=5e-46,
Organism=Saccharomyces cerevisiae, GI6321458, Length=264, Percent_Identity=34.0909090909091, Blast_Score=103, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24583305, Length=246, Percent_Identity=28.4552845528455, Blast_Score=71, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002876
- InterPro:   IPR017856 [H]

Pfam domain/function: PF01709 DUF28 [H]

EC number: NA

Molecular weight: Translated: 26684; Mature: 26553

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRKWANIKEKKASKDKTNSRIYAKFGIEIYVAAKSGDPDPHSNQKLRFVIERAKTYNVP
CCCCCCCCHHHHCCCCCCCCEEEEEECEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCH
KHIIDRAIEKAKGTGDETYSELRYEGFGPNGSMIIVDALTNNVNRTASDVRAAYSKNGGN
HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCC
MGVSGSVAYMFDNTAIFGVEGKDADELLELLMEADIDVRDILDEDGQAIIYAEPEDFHKV
CCCCCCEEEEEECEEEEEECCCCHHHHHHHHHHCCCCHHHHHCCCCCEEEEECCHHHHHH
QEGLKAAGIEEFTVAEIEMIPQNDIQLSGEDLEKFEKLIDALEDLEDVQKVYHNVELED
HHHHHHCCCCCEEEEEEEECCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
GRKWANIKEKKASKDKTNSRIYAKFGIEIYVAAKSGDPDPHSNQKLRFVIERAKTYNVP
CCCCCCCHHHHCCCCCCCCEEEEEECEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCH
KHIIDRAIEKAKGTGDETYSELRYEGFGPNGSMIIVDALTNNVNRTASDVRAAYSKNGGN
HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCC
MGVSGSVAYMFDNTAIFGVEGKDADELLELLMEADIDVRDILDEDGQAIIYAEPEDFHKV
CCCCCCEEEEEECEEEEEECCCCHHHHHHHHHHCCCCHHHHHCCCCCEEEEECCHHHHHH
QEGLKAAGIEEFTVAEIEMIPQNDIQLSGEDLEKFEKLIDALEDLEDVQKVYHNVELED
HHHHHHCCCCCEEEEEEEECCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]