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The map label for this gene is ywbM [H]

Identifier: 226222993

GI number: 226222993

Start: 395037

End: 396197

Strand: Direct

Name: ywbM [H]

Synonym: Lm4b_00385

Alternate gene names: 226222993

Gene position: 395037-396197 (Clockwise)

Preceding gene: 226222992

Following gene: 226222994

Centisome position: 13.56

GC content: 37.64

Gene sequence:

>1161_bases
ATGAAAAAATGGATTATTGTTATGTTGACTATTTTAACAGCAGTATTAGTTGTTGGTTGCGGTGGAACAGGTACAGAAGA
TAAGGCAGAAACAAAAAAGGAAACAACAAAAGAAAGTAAACAAGCAAATGCGGTCAAAAAAGAAGTAAAAGAAATGAAAT
CAAACTTGGATGACGTGAAAAAAGCCATTGCGGACAAAGACAAGAGCGCGCTTCAATCTAGTGCAGCTGAACTACATAAA
CATTGGTTAGAATTTGAAAATAATGTCCGTGGCTTGTATCCATTACAATATACAGATGTCGAAAAATATGAAACACCAAT
TTTCTATGAATCAAAAAATGATAGCCCGAATTTTGATACATTAAATGACAATGCGACTGGACTTGACGGAGCATTAGATA
CACTTGCAAAAGCCAAAGAAACAAAAGCAAAAACTTCCGAAGTGCTTGATAAAGCGGTAGATAATTATTATAAATACGTA
ACAGATCAAGTAGATGAATTCGTTGCACAAACTGAAATCTTCACGAATGCTGTGAAATCTGGTGATATTGAGAAAGCAAA
AGCTACCTATGTTTCGCCACGCTTGAATTACGAACGCATTGAACCAATTGCAGAAAGCTTTGGCGACCTAGATCCAAAAA
TCGATGCACGTATTAACGATGTGGAAAATGAAGCAGACTGGACTGGTTTCCACGTTATTGAACGCGCGCTTTGGGAAAAG
AAATCACTTGATGGCATGGACGTTTACGCGGATAAACTTTTAACAGATGCAAAGGCGCTTCAAGCGGAAGTGAAAAACTT
GAAATTAGAGCCAAAACCAATGGTCGCAGGTGCGATGGAATTACTGAATGAAGCCGCAACAACGAAGATTACTGGGGAAG
AAGAAGCATACTCGCACACGGATTTAGACGATTTAAATGCGAATGTGGAAGGTTCAAAAGTAGTCTACCAAGCGATTATT
CCAGCTTTAAATGCTCAAGATAAAGACTTAGCTGACCAAATTGATGCAGCTTTCAACAAAATGGAAGACACATTAGCAAA
CTACAAAAATGGTGATTCATTCGTACTCTATACAACGCTTACGAAAGACCAAATTCGTGAAATCAGTGACCAATTGAGCC
ATCTTTCCGAATTAATGGCACAAACAGGTAAAATTTTCTAA

Upstream 100 bases:

>100_bases
CACAAGTATTACTCGTTATTTTTGGATTAATTATTTTAATAAAACAACAAATTAAAAAAAGAGTGGATTCTAAAAAGGAA
TTCGCACAAGGGGGAAAATC

Downstream 100 bases:

>100_bases
GCATAGAAAGGAAAACAATGACAGATAAGAAGAGCGATAATCAGACGGAAAAGACAGAAGCCAAGGAAAACAAAGGAATG
ACTCGGCGTGAAATGCTAAA

Product: Conserved hypothetical protein, lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MKKWIIVMLTILTAVLVVGCGGTGTEDKAETKKETTKESKQANAVKKEVKEMKSNLDDVKKAIADKDKSALQSSAAELHK
HWLEFENNVRGLYPLQYTDVEKYETPIFYESKNDSPNFDTLNDNATGLDGALDTLAKAKETKAKTSEVLDKAVDNYYKYV
TDQVDEFVAQTEIFTNAVKSGDIEKAKATYVSPRLNYERIEPIAESFGDLDPKIDARINDVENEADWTGFHVIERALWEK
KSLDGMDVYADKLLTDAKALQAEVKNLKLEPKPMVAGAMELLNEAATTKITGEEEAYSHTDLDDLNANVEGSKVVYQAII
PALNAQDKDLADQIDAAFNKMEDTLANYKNGDSFVLYTTLTKDQIREISDQLSHLSELMAQTGKIF

Sequences:

>Translated_386_residues
MKKWIIVMLTILTAVLVVGCGGTGTEDKAETKKETTKESKQANAVKKEVKEMKSNLDDVKKAIADKDKSALQSSAAELHK
HWLEFENNVRGLYPLQYTDVEKYETPIFYESKNDSPNFDTLNDNATGLDGALDTLAKAKETKAKTSEVLDKAVDNYYKYV
TDQVDEFVAQTEIFTNAVKSGDIEKAKATYVSPRLNYERIEPIAESFGDLDPKIDARINDVENEADWTGFHVIERALWEK
KSLDGMDVYADKLLTDAKALQAEVKNLKLEPKPMVAGAMELLNEAATTKITGEEEAYSHTDLDDLNANVEGSKVVYQAII
PALNAQDKDLADQIDAAFNKMEDTLANYKNGDSFVLYTTLTKDQIREISDQLSHLSELMAQTGKIF
>Mature_386_residues
MKKWIIVMLTILTAVLVVGCGGTGTEDKAETKKETTKESKQANAVKKEVKEMKSNLDDVKKAIADKDKSALQSSAAELHK
HWLEFENNVRGLYPLQYTDVEKYETPIFYESKNDSPNFDTLNDNATGLDGALDTLAKAKETKAKTSEVLDKAVDNYYKYV
TDQVDEFVAQTEIFTNAVKSGDIEKAKATYVSPRLNYERIEPIAESFGDLDPKIDARINDVENEADWTGFHVIERALWEK
KSLDGMDVYADKLLTDAKALQAEVKNLKLEPKPMVAGAMELLNEAATTKITGEEEAYSHTDLDDLNANVEGSKVVYQAII
PALNAQDKDLADQIDAAFNKMEDTLANYKNGDSFVLYTTLTKDQIREISDQLSHLSELMAQTGKIF

Specific function: Unknown

COG id: COG2822

COG function: function code P; Predicted periplasmic lipoprotein involved in iron transport

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0409 family [H]

Homologues:

Organism=Escherichia coli, GI1787254, Length=236, Percent_Identity=43.6440677966102, Blast_Score=187, Evalue=1e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018976 [H]

Pfam domain/function: PF09375 Peptidase_M75 [H]

EC number: NA

Molecular weight: Translated: 43064; Mature: 43064

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure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CHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]