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The map label for this gene is 226222953

Identifier: 226222953

GI number: 226222953

Start: 348791

End: 349663

Strand: Direct

Name: 226222953

Synonym: Lm4b_00345

Alternate gene names: NA

Gene position: 348791-349663 (Clockwise)

Preceding gene: 226222952

Following gene: 226222954

Centisome position: 11.97

GC content: 37.92

Gene sequence:

>873_bases
ATGATAAGTTATGGTGAGCTGATTCGGCAAATAAGACAGTCTAAAAAAATCTCCCAAAAAGAAGTGTACACAGGGGTTAT
TAGTAAATCTTATGCAATTGAATTTGAAAAGGGGACACATGCAATATCAAGCCTATTACTCGAGAAAATTGTCGCTAAGT
TAATGGTGAGTATGGAGGAATTTTTCTTAATGTATCATCAAGAGGAGTTGCCGGAGAAGGAAGATTTTTGGGAAACTTAC
GCGCGGACATGTAAAACGGATGAAGCAAGCGCTTGGGAATCCCTTTACCAAAAAATATCATTAGAAAAAGGAAAAGTTAA
TCAAGTGAAAAGCGCGGCGATAAAACTGGAGTTAGATCATATAAAAGGCAAACAAGTGGCGGACAAAAAAGCGGTTCAAA
TTTTGGAAAATTATTTGATTGAAGCGGTTTTTTGGACATTGCAGGATATCTTTTTATTTACGCGGATGATGCACTATTTG
CCACTGAAAAGCCGAGTACCGTTCTATTATAAATTGTTAAACACGCTGGATAGATACCGCCATTTTGAACGAGGAAGAAG
CATTTTACAATCGGCGCTGGCTAGTATCATGGATGATTTTATAGAGAGAAATGAAATAGAGCATATGGAGCTAATGATAA
AAAGCTTAGAAAAAATTAGTGAGGACTGTGATGGTACTTATTTCAAAATTCTTTGTATGTATTATCGTGGAATTGTGCGG
TGGGGAGAAGGTGAAGAGCGCGAGGGTGGCGAAGAAATCGAGCAGGCAGTAGCTATTTTGCGAGCATTAGGTTATGAAAA
TAAAGCGATAGAGTATGAAACCATGTACCGGCAATTTGCGAGGGAAAACAACGATATAAAAACGATGGAATGA

Upstream 100 bases:

>100_bases
TGGTAAAGATGTTTTATGTACTATATATAGCACTATTTACAGAGAGAAAAGAAAGGAATGTAAAATAAAGGCAAGAATTG
AGCTAAGAGGAGGTCTTCGG

Downstream 100 bases:

>100_bases
AAGCTAAAAAGGACTATTCTTTTTGGTTTTCTTTTTTTGAGTAGTATATATGCGACATTAGAAAATTTTAAGACTCCGCA
TAGTATTATATAGACTGAAG

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcription Regulator

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MISYGELIRQIRQSKKISQKEVYTGVISKSYAIEFEKGTHAISSLLLEKIVAKLMVSMEEFFLMYHQEELPEKEDFWETY
ARTCKTDEASAWESLYQKISLEKGKVNQVKSAAIKLELDHIKGKQVADKKAVQILENYLIEAVFWTLQDIFLFTRMMHYL
PLKSRVPFYYKLLNTLDRYRHFERGRSILQSALASIMDDFIERNEIEHMELMIKSLEKISEDCDGTYFKILCMYYRGIVR
WGEGEEREGGEEIEQAVAILRALGYENKAIEYETMYRQFARENNDIKTME

Sequences:

>Translated_290_residues
MISYGELIRQIRQSKKISQKEVYTGVISKSYAIEFEKGTHAISSLLLEKIVAKLMVSMEEFFLMYHQEELPEKEDFWETY
ARTCKTDEASAWESLYQKISLEKGKVNQVKSAAIKLELDHIKGKQVADKKAVQILENYLIEAVFWTLQDIFLFTRMMHYL
PLKSRVPFYYKLLNTLDRYRHFERGRSILQSALASIMDDFIERNEIEHMELMIKSLEKISEDCDGTYFKILCMYYRGIVR
WGEGEEREGGEEIEQAVAILRALGYENKAIEYETMYRQFARENNDIKTME
>Mature_290_residues
MISYGELIRQIRQSKKISQKEVYTGVISKSYAIEFEKGTHAISSLLLEKIVAKLMVSMEEFFLMYHQEELPEKEDFWETY
ARTCKTDEASAWESLYQKISLEKGKVNQVKSAAIKLELDHIKGKQVADKKAVQILENYLIEAVFWTLQDIFLFTRMMHYL
PLKSRVPFYYKLLNTLDRYRHFERGRSILQSALASIMDDFIERNEIEHMELMIKSLEKISEDCDGTYFKILCMYYRGIVR
WGEGEEREGGEEIEQAVAILRALGYENKAIEYETMYRQFARENNDIKTME

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34272; Mature: 34272

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISYGELIRQIRQSKKISQKEVYTGVISKSYAIEFEKGTHAISSLLLEKIVAKLMVSMEE
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
FFLMYHQEELPEKEDFWETYARTCKTDEASAWESLYQKISLEKGKVNQVKSAAIKLELDH
HHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHEEHHH
IKGKQVADKKAVQILENYLIEAVFWTLQDIFLFTRMMHYLPLKSRVPFYYKLLNTLDRYR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
HFERGRSILQSALASIMDDFIERNEIEHMELMIKSLEKISEDCDGTYFKILCMYYRGIVR
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
WGEGEEREGGEEIEQAVAILRALGYENKAIEYETMYRQFARENNDIKTME
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MISYGELIRQIRQSKKISQKEVYTGVISKSYAIEFEKGTHAISSLLLEKIVAKLMVSMEE
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
FFLMYHQEELPEKEDFWETYARTCKTDEASAWESLYQKISLEKGKVNQVKSAAIKLELDH
HHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHEEHHH
IKGKQVADKKAVQILENYLIEAVFWTLQDIFLFTRMMHYLPLKSRVPFYYKLLNTLDRYR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
HFERGRSILQSALASIMDDFIERNEIEHMELMIKSLEKISEDCDGTYFKILCMYYRGIVR
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
WGEGEEREGGEEIEQAVAILRALGYENKAIEYETMYRQFARENNDIKTME
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA