Definition Listeria monocytogenes Clip81459, complete genome.
Accession NC_012488
Length 2,912,690

Click here to switch to the map view.

The map label for this gene is 226222725

Identifier: 226222725

GI number: 226222725

Start: 95876

End: 98185

Strand: Direct

Name: 226222725

Synonym: Lm4b_00090

Alternate gene names: NA

Gene position: 95876-98185 (Clockwise)

Preceding gene: 226222724

Following gene: 226222726

Centisome position: 3.29

GC content: 35.54

Gene sequence:

>2310_bases
ATGAAACCTACATGGAAAATAGGGATAATCGTTGCAGCTGTTCCGTTAATAATTATTGCTGTCGTCTTATGGGGGTCTTT
TAAGGAGGCAAGGTATAATCTTGTCTCTCTCCCTGATGACGGTGTAGTCCTAAATAATGAGCAAGAGACATTGCAATTTC
AAAAGGGCAATACGCTTTATCGCAGTTGGAATAGTGATCAATTAATTGCGAAAAACGATAAAGAAGATACTCGAAACGAA
ATTATGGAGAGTACCATCCTTTATCTAAATAAAGAAGCCTTAATGTTTACTAAGAGTGTTCCCGTCATTGATACAAATGG
GGTTAGTAGCAAACTAAAAGGAAGACAAGTCTACCAACAGACCAATTCTTCCTATAAATACAAAAACTCAGAAATCACGG
AAAACAGTATTGTAAAACTAGCAAACCGTCAATACTATTTAAACGCAGATGCAACACTTTATCTTGGCGGCAAAGAAATC
AAAAAAGTGTCGAAACCATTACTTTTGATTGATAAAACAGGAAGCGTCACTATTTATGAAAACAAAAAGAAAAGCCGTTT
TCTTGGTCATATGACCTTGAAAGTCAATGATAAAACGGTTTTAGATGCTAGTAACGAAACGTATACTGTCGGCGAACGGA
AAATTGATTTAGCTAGCTTTGGTGGAACAGACAATGAAAAGATAGTCGTAAAAGAAGATAAGAAAAAGACCGCAGAATCT
GCGAAAGAAAAAGAGTCTGCGAAGAAAACAGCAAGTAACTCCTCTCAATCAGAAAATGAAAGTAACCAAACAACAAAAGG
TACAGGCAATCAACTCAATGCTACCAAAAAATACGGAAATAATTTAAATGTTGGAAATGGAACTTCTGATTCGGAACCAA
ACGATGGTAAGGATACTAAAAATAATGGTTCAGGAAGTAATGCGAATGGTGGTACTAATCAATCAGATTTAAATGAAATT
GATAATTATGAAGCAATCTTACGTAAAATAGAGGACTTAAATAAAAAATTAGAGCGAAACATTCCAGTGCTAAGAATCGG
CTATATCGCACCTGGAGTGACTAGCGTGAAAGTCAACTATAACTATGTAGATCCGAATAACACTTTAATTGGTGTCACTA
AAATTAGCGCCGTAGATGAAAAAACTGGAAAAACAGTTAATACGCAATATGTTTCAGCAGTAGATACGGAAGCTACACTA
AAAGGACTTTCGCCAAATGGCAAGTATCATCTTGAATTTACCTATCAATATGATTTAGGAACAAATAAAGGCATTCAGGA
AGTTAAAATGCAAAGCGACTCTTTTACAACGCAAACTGTTGCCGCAATTTATCAAATGCAAAGCGTTACAAGCACAACAA
TGAAAGTAAATATAGCGCTTGATGCACAAATTGATGATGTTAAACGAGCAAGAATTAAAGTAACCAAAGCAGATGGAGAT
TTTTTCTATATGAATGTTAGTGCGAATTTTTTAAATGGTAACGGAGAAACGCTTAATGTAACTGGGCTAAGTCCTAAAAC
TGCTTACCAATTCCAAACGATTATTGAAATGAAAAACGGAGAAACCATTGAATTAAACAGCTCCGAGAAATATTACACTA
TGCAAGCAACTGTACTAAGAAATCTAAGAGCTAGTCAATCTGTGAATAAAGTTTTACAAGTGCAATATGATTGGAGTTCG
GCTGATTATACATTAAATCAAGCAACCATCGAACTGGAAGACGAGGAAGATAAAACAGAAGTAGATTATCAAATCGTTAA
TCAAGAAAAAGGTAATATTCATCTTGTTCCAGACACGAAAAGGGAGTTAATCAACTTAAAAGCCAAACTAGTACTCAAAA
CGACAAATAATAACACAAAAGAAAGCAAAACATTTGAGTATCCTGTTAAGCAAGAAATTGAATACGACAAACAAGCTAAA
CTAACAATGGACTTAACGCCGTTTCAAACTGAAGAAAACAGTGAGTTACAGTCTGAAAAACAAGATGTAGTAGCAGAGAA
AGAAACGAACGGAAATGATTTAACAGCTAAGATGGAAGATGTTTTAGCCCCTCAAAACGCAACTTATGATATGTCCTTTT
CGATGCAACGTAAAGCTCTCGAAACGTATCAGTTGGAATTTGAAAGGAAGATAGCTGGGATAGACGATGATAATTGGACC
GTGTGGAAGAGTCAACAAGTTACAACGGATGAAGCAGGGCAAGTGAAGGTTACAGAAACCATTTCAAAACTAGCTAAAGA
AAGCTTCGATTATCGTGTAGCTGTATACGATGCGCAAGGTGCATTACAACTGTACGTTTATCAAAAGTAG

Upstream 100 bases:

>100_bases
CAGGTGTGAAAATTGATGAAAATTATCAAGACACTAAAGTTACTGTCGAAGAAACAAAATCAGGAAAGAATTTTGGAATT
ATTGAATTGGAGGAGAGCAA

Downstream 100 bases:

>100_bases
TAAAAAATGATATGCATTTTAATACAACAAACTCAAACAGAAGGTAGGAAACAACAATGGATTTAGTAGTTGCATGTAGC
GTAATTGGCGCGGCACTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 769; Mature: 769

Protein sequence:

>769_residues
MKPTWKIGIIVAAVPLIIIAVVLWGSFKEARYNLVSLPDDGVVLNNEQETLQFQKGNTLYRSWNSDQLIAKNDKEDTRNE
IMESTILYLNKEALMFTKSVPVIDTNGVSSKLKGRQVYQQTNSSYKYKNSEITENSIVKLANRQYYLNADATLYLGGKEI
KKVSKPLLLIDKTGSVTIYENKKKSRFLGHMTLKVNDKTVLDASNETYTVGERKIDLASFGGTDNEKIVVKEDKKKTAES
AKEKESAKKTASNSSQSENESNQTTKGTGNQLNATKKYGNNLNVGNGTSDSEPNDGKDTKNNGSGSNANGGTNQSDLNEI
DNYEAILRKIEDLNKKLERNIPVLRIGYIAPGVTSVKVNYNYVDPNNTLIGVTKISAVDEKTGKTVNTQYVSAVDTEATL
KGLSPNGKYHLEFTYQYDLGTNKGIQEVKMQSDSFTTQTVAAIYQMQSVTSTTMKVNIALDAQIDDVKRARIKVTKADGD
FFYMNVSANFLNGNGETLNVTGLSPKTAYQFQTIIEMKNGETIELNSSEKYYTMQATVLRNLRASQSVNKVLQVQYDWSS
ADYTLNQATIELEDEEDKTEVDYQIVNQEKGNIHLVPDTKRELINLKAKLVLKTTNNNTKESKTFEYPVKQEIEYDKQAK
LTMDLTPFQTEENSELQSEKQDVVAEKETNGNDLTAKMEDVLAPQNATYDMSFSMQRKALETYQLEFERKIAGIDDDNWT
VWKSQQVTTDEAGQVKVTETISKLAKESFDYRVAVYDAQGALQLYVYQK

Sequences:

>Translated_769_residues
MKPTWKIGIIVAAVPLIIIAVVLWGSFKEARYNLVSLPDDGVVLNNEQETLQFQKGNTLYRSWNSDQLIAKNDKEDTRNE
IMESTILYLNKEALMFTKSVPVIDTNGVSSKLKGRQVYQQTNSSYKYKNSEITENSIVKLANRQYYLNADATLYLGGKEI
KKVSKPLLLIDKTGSVTIYENKKKSRFLGHMTLKVNDKTVLDASNETYTVGERKIDLASFGGTDNEKIVVKEDKKKTAES
AKEKESAKKTASNSSQSENESNQTTKGTGNQLNATKKYGNNLNVGNGTSDSEPNDGKDTKNNGSGSNANGGTNQSDLNEI
DNYEAILRKIEDLNKKLERNIPVLRIGYIAPGVTSVKVNYNYVDPNNTLIGVTKISAVDEKTGKTVNTQYVSAVDTEATL
KGLSPNGKYHLEFTYQYDLGTNKGIQEVKMQSDSFTTQTVAAIYQMQSVTSTTMKVNIALDAQIDDVKRARIKVTKADGD
FFYMNVSANFLNGNGETLNVTGLSPKTAYQFQTIIEMKNGETIELNSSEKYYTMQATVLRNLRASQSVNKVLQVQYDWSS
ADYTLNQATIELEDEEDKTEVDYQIVNQEKGNIHLVPDTKRELINLKAKLVLKTTNNNTKESKTFEYPVKQEIEYDKQAK
LTMDLTPFQTEENSELQSEKQDVVAEKETNGNDLTAKMEDVLAPQNATYDMSFSMQRKALETYQLEFERKIAGIDDDNWT
VWKSQQVTTDEAGQVKVTETISKLAKESFDYRVAVYDAQGALQLYVYQK
>Mature_769_residues
MKPTWKIGIIVAAVPLIIIAVVLWGSFKEARYNLVSLPDDGVVLNNEQETLQFQKGNTLYRSWNSDQLIAKNDKEDTRNE
IMESTILYLNKEALMFTKSVPVIDTNGVSSKLKGRQVYQQTNSSYKYKNSEITENSIVKLANRQYYLNADATLYLGGKEI
KKVSKPLLLIDKTGSVTIYENKKKSRFLGHMTLKVNDKTVLDASNETYTVGERKIDLASFGGTDNEKIVVKEDKKKTAES
AKEKESAKKTASNSSQSENESNQTTKGTGNQLNATKKYGNNLNVGNGTSDSEPNDGKDTKNNGSGSNANGGTNQSDLNEI
DNYEAILRKIEDLNKKLERNIPVLRIGYIAPGVTSVKVNYNYVDPNNTLIGVTKISAVDEKTGKTVNTQYVSAVDTEATL
KGLSPNGKYHLEFTYQYDLGTNKGIQEVKMQSDSFTTQTVAAIYQMQSVTSTTMKVNIALDAQIDDVKRARIKVTKADGD
FFYMNVSANFLNGNGETLNVTGLSPKTAYQFQTIIEMKNGETIELNSSEKYYTMQATVLRNLRASQSVNKVLQVQYDWSS
ADYTLNQATIELEDEEDKTEVDYQIVNQEKGNIHLVPDTKRELINLKAKLVLKTTNNNTKESKTFEYPVKQEIEYDKQAK
LTMDLTPFQTEENSELQSEKQDVVAEKETNGNDLTAKMEDVLAPQNATYDMSFSMQRKALETYQLEFERKIAGIDDDNWT
VWKSQQVTTDEAGQVKVTETISKLAKESFDYRVAVYDAQGALQLYVYQK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 86269; Mature: 86269

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPTWKIGIIVAAVPLIIIAVVLWGSFKEARYNLVSLPDDGVVLNNEQETLQFQKGNTLY
CCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEECCCHHEEEEECCCEEE
RSWNSDQLIAKNDKEDTRNEIMESTILYLNKEALMFTKSVPVIDTNGVSSKLKGRQVYQQ
EECCCCCEEECCCCHHHHHHHHHHHHEEEECCEEEEECCCCEEECCCCCHHHCHHHHHHH
TNSSYKYKNSEITENSIVKLANRQYYLNADATLYLGGKEIKKVSKPLLLIDKTGSVTIYE
CCCCEEECCCCCCHHHHHEEECCEEEECCCEEEEECCHHHHHHCCCEEEEECCCCEEEEE
NKKKSRFLGHMTLKVNDKTVLDASNETYTVGERKIDLASFGGTDNEKIVVKEDKKKTAES
CCCCCEEEEEEEEEECCCEEEECCCCEEEECCEEEEEEECCCCCCCEEEEECCHHHHHHH
AKEKESAKKTASNSSQSENESNQTTKGTGNQLNATKKYGNNLNVGNGTSDSEPNDGKDTK
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCC
NNGSGSNANGGTNQSDLNEIDNYEAILRKIEDLNKKLERNIPVLRIGYIAPGVTSVKVNY
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEEEE
NYVDPNNTLIGVTKISAVDEKTGKTVNTQYVSAVDTEATLKGLSPNGKYHLEFTYQYDLG
EEECCCCCEEEEEEEEECHHHCCCEECEEEEEEECCHHHEECCCCCCEEEEEEEEEEECC
TNKGIQEVKMQSDSFTTQTVAAIYQMQSVTSTTMKVNIALDAQIDDVKRARIKVTKADGD
CCCCHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCCCEEEEEEEECCCC
FFYMNVSANFLNGNGETLNVTGLSPKTAYQFQTIIEMKNGETIELNSSEKYYTMQATVLR
EEEEEEEEEEECCCCCEEEEECCCCCHHHEEEEEEEECCCCEEEECCCCCEEEEHHHHHH
NLRASQSVNKVLQVQYDWSSADYTLNQATIELEDEEDKTEVDYQIVNQEKGNIHLVPDTK
HHHHHHHHCEEEEEEECCCCCCEEEEEEEEEEECCCCCCEECEEEECCCCCCEEECCCCH
RELINLKAKLVLKTTNNNTKESKTFEYPVKQEIEYDKQAKLTMDLTPFQTEENSELQSEK
HHHHCCEEEEEEEECCCCCCCCCEEECCCHHHCCCCCCCEEEEECCCCCCCCCCHHHHHH
QDVVAEKETNGNDLTAKMEDVLAPQNATYDMSFSMQRKALETYQLEFERKIAGIDDDNWT
HHHHEECCCCCCCEEEEHHHHCCCCCCEEEEEHHHHHHHHHHHHEEEEHHCCCCCCCCEE
VWKSQQVTTDEAGQVKVTETISKLAKESFDYRVAVYDAQGALQLYVYQK
EEECCEECCCCCCCEEHHHHHHHHHHHCCCEEEEEEECCCEEEEEEEEC
>Mature Secondary Structure
MKPTWKIGIIVAAVPLIIIAVVLWGSFKEARYNLVSLPDDGVVLNNEQETLQFQKGNTLY
CCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEECCCHHEEEEECCCEEE
RSWNSDQLIAKNDKEDTRNEIMESTILYLNKEALMFTKSVPVIDTNGVSSKLKGRQVYQQ
EECCCCCEEECCCCHHHHHHHHHHHHEEEECCEEEEECCCCEEECCCCCHHHCHHHHHHH
TNSSYKYKNSEITENSIVKLANRQYYLNADATLYLGGKEIKKVSKPLLLIDKTGSVTIYE
CCCCEEECCCCCCHHHHHEEECCEEEECCCEEEEECCHHHHHHCCCEEEEECCCCEEEEE
NKKKSRFLGHMTLKVNDKTVLDASNETYTVGERKIDLASFGGTDNEKIVVKEDKKKTAES
CCCCCEEEEEEEEEECCCEEEECCCCEEEECCEEEEEEECCCCCCCEEEEECCHHHHHHH
AKEKESAKKTASNSSQSENESNQTTKGTGNQLNATKKYGNNLNVGNGTSDSEPNDGKDTK
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCC
NNGSGSNANGGTNQSDLNEIDNYEAILRKIEDLNKKLERNIPVLRIGYIAPGVTSVKVNY
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEEEE
NYVDPNNTLIGVTKISAVDEKTGKTVNTQYVSAVDTEATLKGLSPNGKYHLEFTYQYDLG
EEECCCCCEEEEEEEEECHHHCCCEECEEEEEEECCHHHEECCCCCCEEEEEEEEEEECC
TNKGIQEVKMQSDSFTTQTVAAIYQMQSVTSTTMKVNIALDAQIDDVKRARIKVTKADGD
CCCCHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCCCEEEEEEEECCCC
FFYMNVSANFLNGNGETLNVTGLSPKTAYQFQTIIEMKNGETIELNSSEKYYTMQATVLR
EEEEEEEEEEECCCCCEEEEECCCCCHHHEEEEEEEECCCCEEEECCCCCEEEEHHHHHH
NLRASQSVNKVLQVQYDWSSADYTLNQATIELEDEEDKTEVDYQIVNQEKGNIHLVPDTK
HHHHHHHHCEEEEEEECCCCCCEEEEEEEEEEECCCCCCEECEEEECCCCCCEEECCCCH
RELINLKAKLVLKTTNNNTKESKTFEYPVKQEIEYDKQAKLTMDLTPFQTEENSELQSEK
HHHHCCEEEEEEEECCCCCCCCCEEECCCHHHCCCCCCCEEEEECCCCCCCCCCHHHHHH
QDVVAEKETNGNDLTAKMEDVLAPQNATYDMSFSMQRKALETYQLEFERKIAGIDDDNWT
HHHHEECCCCCCCEEEEHHHHCCCCCCEEEEEHHHHHHHHHHHHEEEEHHCCCCCCCCEE
VWKSQQVTTDEAGQVKVTETISKLAKESFDYRVAVYDAQGALQLYVYQK
EEECCEECCCCCCCEEHHHHHHHHHHHCCCEEEEEEECCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA