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The map label for this gene is ssb

Identifier: 226222690

GI number: 226222690

Start: 56114

End: 56650

Strand: Direct

Name: ssb

Synonym: Lm4b_00054

Alternate gene names: 226222690

Gene position: 56114-56650 (Clockwise)

Preceding gene: 226222689

Following gene: 226222691

Centisome position: 1.93

GC content: 40.97

Gene sequence:

>537_bases
ATGATGAATCGTGTAGTACTTGTAGGACGCTTAACAAAAGATCCTGAATTACGTTACACTCCAGCTGGTGTGGCTGTTGC
GACTTTTACATTAGCTGTAAATCGCACTTTCACTAACCAACAAGGAGAACGAGAAGCTGACTTTATTAATTGTGTTGTTT
GGCGTAAACCGGCAGAAAACGTTGCTAATTTCCTGAAGAAAGGAAGCATGGCGGGCGTTGATGGCCGTGTTCAAACTCGT
AATTACGAGGGGAACGACGGTAAACGTGTTTATGTGACTGAAATTGTAGCAGAGAGTGTTCAATTCCTTGAACCGCGTAA
TTCTAATGGCGGTGGCGGAAATAACTATCAAAGTGGCAATAACAACAATAATTATAATAGCGGTGGAAATAACTTCGGAC
AAGCACCTACAAATAACGGTGGATTCGGACAGGACCAGCAACAATCTCAAAATCAAAATTATCAATCCACTAATAATGAT
CCTTTTGCAAGTGATGGTAAGCCAATCGACATTTCTGATGACGATTTGCCATTCTAA

Upstream 100 bases:

>100_bases
TCTGATGATATCATTCGTCATATGGTAATTAAAGAAGAAGCATAAGAATTCATTCAAGGCTAGGACCTTGATTTACTAAA
CGAGAGGAGGTTGGTTTTGC

Downstream 100 bases:

>100_bases
ATTCATTTTAGCGGTTTGAACTTTAAGATAGGAGGAACTTTCAATGGCTGGAGGACGCAGAGGCGGACGCCGTCGGAAAA
AAGTATGTTACTTTACTTCC

Product: single-strand binding protein (SSB)

Products: NA

Alternate protein names: SSB 1; Helix-destabilizing protein 1 [H]

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MMNRVVLVGRLTKDPELRYTPAGVAVATFTLAVNRTFTNQQGEREADFINCVVWRKPAENVANFLKKGSMAGVDGRVQTR
NYEGNDGKRVYVTEIVAESVQFLEPRNSNGGGGNNYQSGNNNNNYNSGGNNFGQAPTNNGGFGQDQQQSQNQNYQSTNND
PFASDGKPIDISDDDLPF

Sequences:

>Translated_178_residues
MMNRVVLVGRLTKDPELRYTPAGVAVATFTLAVNRTFTNQQGEREADFINCVVWRKPAENVANFLKKGSMAGVDGRVQTR
NYEGNDGKRVYVTEIVAESVQFLEPRNSNGGGGNNYQSGNNNNNYNSGGNNFGQAPTNNGGFGQDQQQSQNQNYQSTNND
PFASDGKPIDISDDDLPF
>Mature_178_residues
MMNRVVLVGRLTKDPELRYTPAGVAVATFTLAVNRTFTNQQGEREADFINCVVWRKPAENVANFLKKGSMAGVDGRVQTR
NYEGNDGKRVYVTEIVAESVQFLEPRNSNGGGGNNYQSGNNNNNYNSGGNNFGQAPTNNGGFGQDQQQSQNQNYQSTNND
PFASDGKPIDISDDDLPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=183, Percent_Identity=28.9617486338798, Blast_Score=74, Evalue=4e-15,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 19493; Mature: 19493

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNRVVLVGRLTKDPELRYTPAGVAVATFTLAVNRTFTNQQGEREADFINCVVWRKPAEN
CCCCEEEEEECCCCCCCEECCCCCEEEEEEEHEECCCCCCCCCCCCCEEEEEEECCCHHH
VANFLKKGSMAGVDGRVQTRNYEGNDGKRVYVTEIVAESVQFLEPRNSNGGGGNNYQSGN
HHHHHHCCCCCCCCCEEEECCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
NNNNYNSGGNNFGQAPTNNGGFGQDQQQSQNQNYQSTNNDPFASDGKPIDISDDDLPF
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCC
>Mature Secondary Structure
MMNRVVLVGRLTKDPELRYTPAGVAVATFTLAVNRTFTNQQGEREADFINCVVWRKPAEN
CCCCEEEEEECCCCCCCEECCCCCEEEEEEEHEECCCCCCCCCCCCCEEEEEEECCCHHH
VANFLKKGSMAGVDGRVQTRNYEGNDGKRVYVTEIVAESVQFLEPRNSNGGGGNNYQSGN
HHHHHHCCCCCCCCCEEEECCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
NNNNYNSGGNNFGQAPTNNGGFGQDQQQSQNQNYQSTNNDPFASDGKPIDISDDDLPF
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]