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The map label for this gene is mreD

Identifier: 225862033

GI number: 225862033

Start: 2088372

End: 2088866

Strand: Reverse

Name: mreD

Synonym: SPT_2235

Alternate gene names: NA

Gene position: 2088866-2088372 (Counterclockwise)

Preceding gene: 225862034

Following gene: 225862032

Centisome position: 98.9

GC content: 32.93

Gene sequence:

>495_bases
ATGAGACAGTTGAAGCGAGTTGGAGTATTTTTATTGCTTCCTTTCTTTGTTCTAATTGACGCCCATATTAGCCAGCTTCT
GGGCTCATTTTTCCCCCATGTACATTTGGCTAGTCATTTTCTTTTTCTATTTCTCTTATTTGAGACGATAGAAGTATCAG
AGTATCTCTACCTAGTCTATTGTTTTGTTATAGGCTTGGTTTATGATGTTTACTTTTTCCATCTAATAGGGATTACAACT
CTCTTATTTATCTTATTGGGAGCCTTCCTTCATAAATTGAATAGTGTTATTTTGTTGAATCGTTGGACAAGAATGCTAGC
TATGATTGTGCTGACATTCCTGTTTGAAATGGGTAGTTATCTTTTGGCTTTTATGGTAGGGTTGACAGTAGATAGCATGT
CGATTTTTATAGTCTATAGCTTGGTACCGACGATGATTTTAAATTTTTTATGGATTACTGTTTTTCAATTTATTTTTGAA
AAATATTATCTATAA

Upstream 100 bases:

>100_bases
CCACAACGCATAGTACAGACTATTTGACACGAGAAGTAACTGTTAAATTGAGTGCAGATACTCATAATGTAGATGTGATA
GAATTAGTGGGGAATTCATA

Downstream 100 bases:

>100_bases
GAACGACATATAAATGTAACAAAGGCGTAATATTTATTAGGCCTTTTTTTGGTATACTAGTATTGTCTTTAAAAGAAGGA
GTATCTACGTAATATGAAGA

Product: rod shape-determining protein MreD

Products: NA

Alternate protein names: Cell Shape Determining Protein MreD; Cell-Shape Determining Protein MreD

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MRQLKRVGVFLLLPFFVLIDAHISQLLGSFFPHVHLASHFLFLFLLFETIEVSEYLYLVYCFVIGLVYDVYFFHLIGITT
LLFILLGAFLHKLNSVILLNRWTRMLAMIVLTFLFEMGSYLLAFMVGLTVDSMSIFIVYSLVPTMILNFLWITVFQFIFE
KYYL

Sequences:

>Translated_164_residues
MRQLKRVGVFLLLPFFVLIDAHISQLLGSFFPHVHLASHFLFLFLLFETIEVSEYLYLVYCFVIGLVYDVYFFHLIGITT
LLFILLGAFLHKLNSVILLNRWTRMLAMIVLTFLFEMGSYLLAFMVGLTVDSMSIFIVYSLVPTMILNFLWITVFQFIFE
KYYL
>Mature_164_residues
MRQLKRVGVFLLLPFFVLIDAHISQLLGSFFPHVHLASHFLFLFLLFETIEVSEYLYLVYCFVIGLVYDVYFFHLIGITT
LLFILLGAFLHKLNSVILLNRWTRMLAMIVLTFLFEMGSYLLAFMVGLTVDSMSIFIVYSLVPTMILNFLWITVFQFIFE
KYYL

Specific function: Unknown

COG id: COG2891

COG function: function code M; Cell shape-determining protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19325; Mature: 19325

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQLKRVGVFLLLPFFVLIDAHISQLLGSFFPHVHLASHFLFLFLLFETIEVSEYLYLVY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CFVIGLVYDVYFFHLIGITTLLFILLGAFLHKLNSVILLNRWTRMLAMIVLTFLFEMGSY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAFMVGLTVDSMSIFIVYSLVPTMILNFLWITVFQFIFEKYYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRQLKRVGVFLLLPFFVLIDAHISQLLGSFFPHVHLASHFLFLFLLFETIEVSEYLYLVY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CFVIGLVYDVYFFHLIGITTLLFILLGAFLHKLNSVILLNRWTRMLAMIVLTFLFEMGSY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAFMVGLTVDSMSIFIVYSLVPTMILNFLWITVFQFIFEKYYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA