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The map label for this gene is yvdE [H]

Identifier: 225861891

GI number: 225861891

Start: 1932198

End: 1932887

Strand: Reverse

Name: yvdE [H]

Synonym: SPT_2083

Alternate gene names: 225861891

Gene position: 1932887-1932198 (Counterclockwise)

Preceding gene: 225861892

Following gene: 225861890

Centisome position: 91.51

GC content: 42.17

Gene sequence:

>690_bases
ATGGCTAGAACGGTTGTAGGAGTTACTGCAAATCTATGTCCCGTAGACGCAGAAGGCAAAATCATTCATTCATCTGTATC
TTGTAGATTCGCAGAGATCATTCGTCAAGTCGGTGGTCTCCCTTTAGTCATTCCTGTTGGTGATGAGTCAGTTGTACGTG
ATTATGTGGAAATGATTGACAAACTCATTTTGACAGGAGGCCAAAATGTTCATCCTCAGTTTTATGGAGAGAAAAAGACC
GTCGAGAGCGATGATTACAATCTGGTCCGTGACGAATTTGAATTGGCACTCTTGAAGGAAGCGCTTCGTCAGAATAAACC
AATTATGGCAATCTGTCGCGGTGTCCAACTTGTCAATGTTGCCTTTGGTGGAACCCTCAATCAAGAAATCGAAGGTCACT
GGCAAGGACTACCTTTCGGGACATCTCACTCTATTGAGACAGTAGAAGGAAGCGTGGTGGCTAAGCTATTTGGGAAAGAA
AGTCAGGTCAATTCAGTCCATCGTCAAAGCATTAAAGATTTGGCACCCAATTTCCGTGTAACTGCTATTGATTCAAGAGA
CCAAACTATTGAAGCGATTGAGTCTATCGACGAGCACCGCATTATCGGTTTACAGTGGCATCCAGAGTTTCTGGTTAATG
AAGAAGATGGCAATTTAGAATTATTTGAGTATTTATTGAATGAACTGTAA

Upstream 100 bases:

>100_bases
ATAAAAAATGTTTATCACAGCCTTAAAAAAAACATATTAGACGAAAGTCATTTTGAGTGATATGATAGGACTATCGTTAG
CATTCGAAAGGAGAGGCATC

Downstream 100 bases:

>100_bases
CGATTGGAATATCTGGTCGTTCTTTCTTTTATTTTTTCAAAATTTTTAGAATGTGGTATTTTACGCAAACGTTTGAATTC
TGATAAAAATTGGAGAAATT

Product: glutamine amidotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MARTVVGVTANLCPVDAEGKIIHSSVSCRFAEIIRQVGGLPLVIPVGDESVVRDYVEMIDKLILTGGQNVHPQFYGEKKT
VESDDYNLVRDEFELALLKEALRQNKPIMAICRGVQLVNVAFGGTLNQEIEGHWQGLPFGTSHSIETVEGSVVAKLFGKE
SQVNSVHRQSIKDLAPNFRVTAIDSRDQTIEAIESIDEHRIIGLQWHPEFLVNEEDGNLELFEYLLNEL

Sequences:

>Translated_229_residues
MARTVVGVTANLCPVDAEGKIIHSSVSCRFAEIIRQVGGLPLVIPVGDESVVRDYVEMIDKLILTGGQNVHPQFYGEKKT
VESDDYNLVRDEFELALLKEALRQNKPIMAICRGVQLVNVAFGGTLNQEIEGHWQGLPFGTSHSIETVEGSVVAKLFGKE
SQVNSVHRQSIKDLAPNFRVTAIDSRDQTIEAIESIDEHRIIGLQWHPEFLVNEEDGNLELFEYLLNEL
>Mature_228_residues
ARTVVGVTANLCPVDAEGKIIHSSVSCRFAEIIRQVGGLPLVIPVGDESVVRDYVEMIDKLILTGGQNVHPQFYGEKKTV
ESDDYNLVRDEFELALLKEALRQNKPIMAICRGVQLVNVAFGGTLNQEIEGHWQGLPFGTSHSIETVEGSVVAKLFGKES
QVNSVHRQSIKDLAPNFRVTAIDSRDQTIEAIESIDEHRIIGLQWHPEFLVNEEDGNLELFEYLLNEL

Specific function: Unknown

COG id: COG2071

COG function: function code R; Predicted glutamine amidotransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081871, Length=240, Percent_Identity=31.6666666666667, Blast_Score=99, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR011697 [H]

Pfam domain/function: PF07722 Peptidase_C26 [H]

EC number: NA

Molecular weight: Translated: 25522; Mature: 25391

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTVVGVTANLCPVDAEGKIIHSSVSCRFAEIIRQVGGLPLVIPVGDESVVRDYVEMID
CCCEEEEEECCCCCCCCCCCEEECHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHH
KLILTGGQNVHPQFYGEKKTVESDDYNLVRDEFELALLKEALRQNKPIMAICRGVQLVNV
HHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCEEEEE
AFGGTLNQEIEGHWQGLPFGTSHSIETVEGSVVAKLFGKESQVNSVHRQSIKDLAPNFRV
EECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEE
TAIDSRDQTIEAIESIDEHRIIGLQWHPEFLVNEEDGNLELFEYLLNEL
EEECCCCHHHHHHHCCCCCEEEEEEECCCEEEECCCCCHHHHHHHHHHC
>Mature Secondary Structure 
ARTVVGVTANLCPVDAEGKIIHSSVSCRFAEIIRQVGGLPLVIPVGDESVVRDYVEMID
CCEEEEEECCCCCCCCCCCEEECHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHH
KLILTGGQNVHPQFYGEKKTVESDDYNLVRDEFELALLKEALRQNKPIMAICRGVQLVNV
HHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCEEEEE
AFGGTLNQEIEGHWQGLPFGTSHSIETVEGSVVAKLFGKESQVNSVHRQSIKDLAPNFRV
EECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEE
TAIDSRDQTIEAIESIDEHRIIGLQWHPEFLVNEEDGNLELFEYLLNEL
EEECCCCHHHHHHHCCCCCEEEEEEECCCEEEECCCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]