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The map label for this gene is 225861887

Identifier: 225861887

GI number: 225861887

Start: 1928647

End: 1929081

Strand: Reverse

Name: 225861887

Synonym: SPT_2079

Alternate gene names: NA

Gene position: 1929081-1928647 (Counterclockwise)

Preceding gene: 225861888

Following gene: 225861886

Centisome position: 91.33

GC content: 40.0

Gene sequence:

>435_bases
ATGGACATCTGGGAAAAGATGTACGAAGAAGCACAGAAACTATACAATCCACATGAAGTATCAGACTTTGTTTATGCCAA
TCATGTTGTAGCTGCAGTAGAAGCAGAAGATGGACAAATATTTACAGGATTCTGTATGGAGGGAACCTGTGGTGTTTTCC
ATCTCTGCGCAGAACGGGCGGCCCTCTTCAATATGTACCAATTTTCAGGACAAACTAAGGTTAAGAAAGTATTAGCCTTT
CGAGACAAACCACCTTATGGTGGAAGTTCAGCCATGCCTTGCGGTGCTTGTAGAGAATTCCTTTTAGAACTTAATGCTGA
AAATAAAGATGCAGAATTCATGATGGACTATAATATAAGAAAAACAGTTAAAGTCGCAGAACTAATCCCTTATTGGTGGG
GAGAAGAACGTGCTTCTAAGTTTAATGAGCGATAG

Upstream 100 bases:

>100_bases
CCAGAATTACCAGATACAATTTTCTTGCTTGGACGTGAAAAATCAATTCAGCATATCGAAAACATGCTAAAAGAAATCTC
TAAATAAAGAGGATACAATA

Downstream 100 bases:

>100_bases
AAGAGTCAGTATAATTTTGGCTCTTTTTACTATAAGTTGAAAAAATAAAAAAAATTAGAAAAAGTAGTTGACAAAGTTTG
AAAAGACTGTATAATAGTAA

Product: cytidine/deoxycytidylate deaminase family protein

Products: NA

Alternate protein names: Cytidine/Deoxycytidylate Deaminase Family Protein; Cytidine/Deoxycytidylate Deaminase

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MDIWEKMYEEAQKLYNPHEVSDFVYANHVVAAVEAEDGQIFTGFCMEGTCGVFHLCAERAALFNMYQFSGQTKVKKVLAF
RDKPPYGGSSAMPCGACREFLLELNAENKDAEFMMDYNIRKTVKVAELIPYWWGEERASKFNER

Sequences:

>Translated_144_residues
MDIWEKMYEEAQKLYNPHEVSDFVYANHVVAAVEAEDGQIFTGFCMEGTCGVFHLCAERAALFNMYQFSGQTKVKKVLAF
RDKPPYGGSSAMPCGACREFLLELNAENKDAEFMMDYNIRKTVKVAELIPYWWGEERASKFNER
>Mature_144_residues
MDIWEKMYEEAQKLYNPHEVSDFVYANHVVAAVEAEDGQIFTGFCMEGTCGVFHLCAERAALFNMYQFSGQTKVKKVLAF
RDKPPYGGSSAMPCGACREFLLELNAENKDAEFMMDYNIRKTVKVAELIPYWWGEERASKFNER

Specific function: Unknown

COG id: COG0295

COG function: function code F; Cytidine deaminase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16577; Mature: 16577

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIWEKMYEEAQKLYNPHEVSDFVYANHVVAAVEAEDGQIFTGFCMEGTCGVFHLCAERA
CCHHHHHHHHHHHHCCCHHHHHHHHHHHEEEEEECCCCEEEEEEECCCCHHHHHHHHHHH
ALFNMYQFSGQTKVKKVLAFRDKPPYGGSSAMPCGACREFLLELNAENKDAEFMMDYNIR
HHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCH
KTVKVAELIPYWWGEERASKFNER
HHHHHHHHHCCCCCHHHHHHCCCC
>Mature Secondary Structure
MDIWEKMYEEAQKLYNPHEVSDFVYANHVVAAVEAEDGQIFTGFCMEGTCGVFHLCAERA
CCHHHHHHHHHHHHCCCHHHHHHHHHHHEEEEEECCCCEEEEEEECCCCHHHHHHHHHHH
ALFNMYQFSGQTKVKKVLAFRDKPPYGGSSAMPCGACREFLLELNAENKDAEFMMDYNIR
HHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCH
KTVKVAELIPYWWGEERASKFNER
HHHHHHHHHCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA