Click here to switch to the map view.

The map label for this gene is 225857979

Identifier: 225857979

GI number: 225857979

Start: 154216

End: 155079

Strand: Reverse

Name: 225857979

Synonym: SP70585_0179

Alternate gene names: NA

Gene position: 155079-154216 (Counterclockwise)

Preceding gene: 225857984

Following gene: 225857973

Centisome position: 7.1

GC content: 37.73

Gene sequence:

>864_bases
ATGCGTTATGATTTCGGAAAGGTCTATAAAGAAATACGTGAGTCAAAGGGGCTGACCCAAGAAGAGGTCTGTGGGGGTGT
TCTCTCAAGAACCAGCTTATCAAAAATCGAAAGTGGCAAGACAACCCCAAAATATGAAAATATGGAATTTCTTCTCCGTC
AAATCAATATGAGTTTTGAAGAGTTTGAATATATCTGTCAACTTTATCAACCAAGTCAACGCACAGAGATTATGCAAACC
TATCTCAATATGCGTTCCATTATCGGGACCAGCGATCTTGTCAATTTATTTCAAAAATGCCAAGACTACCTCAAGACCCA
CCACGATCTCCCTATAGAAGAAATCAGAGATATGCTTGAAGTTGTTATTTATCTCCGTCAACACGGGGCAGGGGAACTAT
CAAAACACGCAAAACAGGTTGTCAAAAAACTTTGGAAAAAAATTGAAAAACAAGATACATGGTATGAGAGTGATCTAAAA
ATCCTCAATACCATTCTTTTCAGTTTTCCCATTGAATACCTCCATCTCATCACTGGAAAAATATTGCAACGCCTAGAAGT
CTATAAAAACTATCAACATTTATATGACTTGCGAATGACAATTCTATTAAACCTTTCCACACTCTATCTATACAATCAAG
ATAAAAACATGTGTAAGCAAATCTGCTACACTTTACTGGAGGACGCCAAGAATAAGAAAAGCTACGATAGGCTGGCTATC
TGCTATGTCCGTATTGGGATTTGTACAGACGATTCTAAACTTATCCAAAAAGGGTTCTCCCTTCTGGAGCTAACCGAGGA
AACTTCTATGCTGTCTCATCTCAAAAAAGAAGTAGAGATCTATTACCAAGCGAAGGAAAGATAA

Upstream 100 bases:

>100_bases
TTTATTTCGACTTTCTTTTTTACTTTTTACATTGCTATGATACAATATTTTTAACAAGATTTTATTGTTTGTTAACTTTT
TTCACAGAAAGGAGAAAATC

Downstream 100 bases:

>100_bases
AAAAGCCGAGGGATTTCCTCGACTCTTTACATATTATTTGTTCGTTAGTTCTTAATACCAGCCATTGTTAAGCCAGAAGT
TTTTAGCTCTGCCAAGCCAC

Product: helix-turn-helix domain protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MRYDFGKVYKEIRESKGLTQEEVCGGVLSRTSLSKIESGKTTPKYENMEFLLRQINMSFEEFEYICQLYQPSQRTEIMQT
YLNMRSIIGTSDLVNLFQKCQDYLKTHHDLPIEEIRDMLEVVIYLRQHGAGELSKHAKQVVKKLWKKIEKQDTWYESDLK
ILNTILFSFPIEYLHLITGKILQRLEVYKNYQHLYDLRMTILLNLSTLYLYNQDKNMCKQICYTLLEDAKNKKSYDRLAI
CYVRIGICTDDSKLIQKGFSLLELTEETSMLSHLKKEVEIYYQAKER

Sequences:

>Translated_287_residues
MRYDFGKVYKEIRESKGLTQEEVCGGVLSRTSLSKIESGKTTPKYENMEFLLRQINMSFEEFEYICQLYQPSQRTEIMQT
YLNMRSIIGTSDLVNLFQKCQDYLKTHHDLPIEEIRDMLEVVIYLRQHGAGELSKHAKQVVKKLWKKIEKQDTWYESDLK
ILNTILFSFPIEYLHLITGKILQRLEVYKNYQHLYDLRMTILLNLSTLYLYNQDKNMCKQICYTLLEDAKNKKSYDRLAI
CYVRIGICTDDSKLIQKGFSLLELTEETSMLSHLKKEVEIYYQAKER
>Mature_287_residues
MRYDFGKVYKEIRESKGLTQEEVCGGVLSRTSLSKIESGKTTPKYENMEFLLRQINMSFEEFEYICQLYQPSQRTEIMQT
YLNMRSIIGTSDLVNLFQKCQDYLKTHHDLPIEEIRDMLEVVIYLRQHGAGELSKHAKQVVKKLWKKIEKQDTWYESDLK
ILNTILFSFPIEYLHLITGKILQRLEVYKNYQHLYDLRMTILLNLSTLYLYNQDKNMCKQICYTLLEDAKNKKSYDRLAI
CYVRIGICTDDSKLIQKGFSLLELTEETSMLSHLKKEVEIYYQAKER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34137; Mature: 34137

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA