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The map label for this gene is xylA

Identifier: 225852079

GI number: 225852079

Start: 561607

End: 562914

Strand: Reverse

Name: xylA

Synonym: BMEA_A0585

Alternate gene names: 225852079

Gene position: 562914-561607 (Counterclockwise)

Preceding gene: 225852080

Following gene: 225852074

Centisome position: 26.48

GC content: 56.27

Gene sequence:

>1308_bases
ATGAGTACGGGATTTTTCGGCGATATTCAGAAGGTGCGCTATGAGGGGCCGGAGAGCGACAATCCGCTGGCCTTCCGCCA
TTATAATGCAGATGAAATCGTGCTCGGCAAACGCATGGAAGACCATTTGCGCTTTGCGGTGGCCTATTGGCACAGTTTCG
CCTGGGAGGGTGGCGATCCGTTCGGCGGGCGCACCTTCGACCGGCCGTGGTTTTCCAACGAGATCGATGCGGCAAAACTC
AAGGCCGATGTCGCCTTTGAATTCTTCTCCCTGCTCGGCGCACCTTATTACTGCTTCCACGATGCCGATGTGCGGCCAGA
GGGCCGCAATTTTGCGGAAAACACGCGCTATCTCAATGAAATTGTCGATATTTTCGAGAAGAAGCAGGCCGAAACCGGCA
TGAAACTGCTCTGGGGCACGGCCAATCTTTTTTCCAACCGGCGCTATATGGCGGGTGCGGCCACAAATCCCGATCCTGAT
GTCTTCGCTTTTGCCGCTGCAACAGTGAAGACCTGTATCGACGCCACCAAGCGGCTCGGTGGAGAGAATTACGTGCTTTG
GGGCGGTCGCGAAGGCTATGAAACCCTGCTCAATACCGATCTTTCGCGTGAACTCGACCATATGGGCCGGTTCCTTAGCC
TCGTGGTGGAATACAAGCACAAAATCGGCTTCAAGGGCACGATCCTGATCGAGCCCAAGCCGCAGGAGCCGACCAAACAT
CAGTATGATTACGATGTCGCGACGGTTTACGGCTTCCTCAAGCGTTACGGTCTGGAAAACGAGGTGAAGGTCAATATCGA
GCAGGGCCATGCCATTCTGGCCGGTCACTCGTTCGAGCATGAGCTGGCGCTTGCCCGCACACTTGGCATTTTCGGCTCCA
TCGACATGAACCGCAACGATTACCAATCCGGCTGGGACACCGATCAGTTCCCGAACAATGTGCCGGAGATGGCGCTGGCC
TATTATCAGGTTCTGCTGGCAGGCGGCTTCACGACCGGCGGCACGAATTTCGACGCCAAGCTGCGCCGCCAGTCGCTTGA
TCCGCAGGATCTGCTAATCGGCCATATTGGCGGCATGGATTGCTGTGCACGCGGACTAAAAGCAGCCGCGCGGATGCTTG
AAGACGGCGCTTTATCCAAGCCGCTTGATGAGCGTTATGCGGGCTGGAACGGCGAGTTCGGCAAGAGGCTTCTGAGCGGC
CTTTCGCTGGACCAGATCGCGGGTGAAGTCGAAGCGAAAGACATCAATCCGCAGCCGAAATCCGGCCGTCAGGAATATCT
GGAAAACATCGTCAATCGCTACGTTTGA

Upstream 100 bases:

>100_bases
GAAGCCTATCAGCGTTATCACGCGCTTTATCCGGCGCTCCATGCACTTGACTAAACCCTGTCGCGGACGGTGACAATTTC
AGAACCTTGAGAGGATGAAC

Downstream 100 bases:

>100_bases
ACCCCACGAAACAGAAAGGGCGCCAGCGGTGCCCTTTCGCTTTAAAGCTTAACCCAACCACCATTTTTCCGTGACGAGCG
CACGCAGGCATCAATGAAAG

Product: xylose isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 434

Protein sequence:

>435_residues
MSTGFFGDIQKVRYEGPESDNPLAFRHYNADEIVLGKRMEDHLRFAVAYWHSFAWEGGDPFGGRTFDRPWFSNEIDAAKL
KADVAFEFFSLLGAPYYCFHDADVRPEGRNFAENTRYLNEIVDIFEKKQAETGMKLLWGTANLFSNRRYMAGAATNPDPD
VFAFAAATVKTCIDATKRLGGENYVLWGGREGYETLLNTDLSRELDHMGRFLSLVVEYKHKIGFKGTILIEPKPQEPTKH
QYDYDVATVYGFLKRYGLENEVKVNIEQGHAILAGHSFEHELALARTLGIFGSIDMNRNDYQSGWDTDQFPNNVPEMALA
YYQVLLAGGFTTGGTNFDAKLRRQSLDPQDLLIGHIGGMDCCARGLKAAARMLEDGALSKPLDERYAGWNGEFGKRLLSG
LSLDQIAGEVEAKDINPQPKSGRQEYLENIVNRYV

Sequences:

>Translated_435_residues
MSTGFFGDIQKVRYEGPESDNPLAFRHYNADEIVLGKRMEDHLRFAVAYWHSFAWEGGDPFGGRTFDRPWFSNEIDAAKL
KADVAFEFFSLLGAPYYCFHDADVRPEGRNFAENTRYLNEIVDIFEKKQAETGMKLLWGTANLFSNRRYMAGAATNPDPD
VFAFAAATVKTCIDATKRLGGENYVLWGGREGYETLLNTDLSRELDHMGRFLSLVVEYKHKIGFKGTILIEPKPQEPTKH
QYDYDVATVYGFLKRYGLENEVKVNIEQGHAILAGHSFEHELALARTLGIFGSIDMNRNDYQSGWDTDQFPNNVPEMALA
YYQVLLAGGFTTGGTNFDAKLRRQSLDPQDLLIGHIGGMDCCARGLKAAARMLEDGALSKPLDERYAGWNGEFGKRLLSG
LSLDQIAGEVEAKDINPQPKSGRQEYLENIVNRYV
>Mature_434_residues
STGFFGDIQKVRYEGPESDNPLAFRHYNADEIVLGKRMEDHLRFAVAYWHSFAWEGGDPFGGRTFDRPWFSNEIDAAKLK
ADVAFEFFSLLGAPYYCFHDADVRPEGRNFAENTRYLNEIVDIFEKKQAETGMKLLWGTANLFSNRRYMAGAATNPDPDV
FAFAAATVKTCIDATKRLGGENYVLWGGREGYETLLNTDLSRELDHMGRFLSLVVEYKHKIGFKGTILIEPKPQEPTKHQ
YDYDVATVYGFLKRYGLENEVKVNIEQGHAILAGHSFEHELALARTLGIFGSIDMNRNDYQSGWDTDQFPNNVPEMALAY
YQVLLAGGFTTGGTNFDAKLRRQSLDPQDLLIGHIGGMDCCARGLKAAARMLEDGALSKPLDERYAGWNGEFGKRLLSGL
SLDQIAGEVEAKDINPQPKSGRQEYLENIVNRYV

Specific function: Unknown

COG id: COG2115

COG function: function code G; Xylose isomerase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xylose isomerase family

Homologues:

Organism=Escherichia coli, GI1789988, Length=435, Percent_Identity=62.5287356321839, Blast_Score=574, Evalue=1e-165,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): XYLA_BRUA1 (B2SA37)

Other databases:

- EMBL:   CP000887
- RefSeq:   YP_001934541.1
- ProteinModelPortal:   B2SA37
- SMR:   B2SA37
- GeneID:   6327694
- GenomeReviews:   CP000887_GR
- KEGG:   bmc:BAbS19_I05320
- HOGENOM:   HBG297199
- OMA:   LLGWDTD
- ProtClustDB:   PRK05474
- GO:   GO:0005737
- HAMAP:   MF_00455
- InterPro:   IPR013022
- InterPro:   IPR012307
- InterPro:   IPR013452
- InterPro:   IPR001998
- Gene3D:   G3DSA:3.20.20.150
- PRINTS:   PR00688
- TIGRFAMs:   TIGR02630

Pfam domain/function: PF01261 AP_endonuc_2; SSF51658 Xyl_isomerase-like_TIM-brl

EC number: =5.3.1.5

Molecular weight: Translated: 49005; Mature: 48873

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: PS51415 XYLOSE_ISOMERASE; PS00172 XYLOSE_ISOMERASE_1 ; PS00173 XYLOSE_ISOMERASE_2

Important sites: ACT_SITE 100-100 ACT_SITE 103-103

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTGFFGDIQKVRYEGPESDNPLAFRHYNADEIVLGKRMEDHLRFAVAYWHSFAWEGGDP
CCCCCCCCHHHHHCCCCCCCCCEEEEECCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCC
FGGRTFDRPWFSNEIDAAKLKADVAFEFFSLLGAPYYCFHDADVRPEGRNFAENTRYLNE
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHH
IVDIFEKKQAETGMKLLWGTANLFSNRRYMAGAATNPDPDVFAFAAATVKTCIDATKRLG
HHHHHHHHHHHCCCEEEEEHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCC
GENYVLWGGREGYETLLNTDLSRELDHMGRFLSLVVEYKHKIGFKGTILIEPKPQEPTKH
CCCEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
QYDYDVATVYGFLKRYGLENEVKVNIEQGHAILAGHSFEHELALARTLGIFGSIDMNRND
CCCCHHHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCHHHHHHHHHHHHHEEECCCCCC
YQSGWDTDQFPNNVPEMALAYYQVLLAGGFTTGGTNFDAKLRRQSLDPQDLLIGHIGGMD
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHHHEECCCCHH
CCARGLKAAARMLEDGALSKPLDERYAGWNGEFGKRLLSGLSLDQIAGEVEAKDINPQPK
HHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHCCCHHHHHCCCCCCCCCCCCC
SGRQEYLENIVNRYV
CCHHHHHHHHHHHCC
>Mature Secondary Structure 
STGFFGDIQKVRYEGPESDNPLAFRHYNADEIVLGKRMEDHLRFAVAYWHSFAWEGGDP
CCCCCCCHHHHHCCCCCCCCCEEEEECCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCC
FGGRTFDRPWFSNEIDAAKLKADVAFEFFSLLGAPYYCFHDADVRPEGRNFAENTRYLNE
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHH
IVDIFEKKQAETGMKLLWGTANLFSNRRYMAGAATNPDPDVFAFAAATVKTCIDATKRLG
HHHHHHHHHHHCCCEEEEEHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCC
GENYVLWGGREGYETLLNTDLSRELDHMGRFLSLVVEYKHKIGFKGTILIEPKPQEPTKH
CCCEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
QYDYDVATVYGFLKRYGLENEVKVNIEQGHAILAGHSFEHELALARTLGIFGSIDMNRND
CCCCHHHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCHHHHHHHHHHHHHEEECCCCCC
YQSGWDTDQFPNNVPEMALAYYQVLLAGGFTTGGTNFDAKLRRQSLDPQDLLIGHIGGMD
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHHHEECCCCHH
CCARGLKAAARMLEDGALSKPLDERYAGWNGEFGKRLLSGLSLDQIAGEVEAKDINPQPK
HHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHCCCHHHHHCCCCCCCCCCCCC
SGRQEYLENIVNRYV
CCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA