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The map label for this gene is bepR [H]

Identifier: 225851837

GI number: 225851837

Start: 321292

End: 321921

Strand: Reverse

Name: bepR [H]

Synonym: BMEA_A0325

Alternate gene names: 225851837

Gene position: 321921-321292 (Counterclockwise)

Preceding gene: 225851840

Following gene: 225851836

Centisome position: 15.14

GC content: 56.19

Gene sequence:

>630_bases
ATGCGCAGAACAAAAGCCGAGGCCGCGGAAACCCGTGAAGCCATTCTTCTGGCAGCCGAACAGGTGTTCCTCGAACGCGG
CGTGAACCAGTCCACACTGACGGAAATCGCATGTTACGCAGGCGTGACGCGCGGCGCGATCTATTTTCATTTTGAAGACA
AGCTCGATATTTTCCAGTCCATCATTGGCCGGGCGCGCTTTCCGCAGGAAGAGATCATGCTTCAGGCGGCGCGCTTCGAC
CATCCCAATCCGCTCCATATTCTCGAACAATCCATCGTCGCCGCGCTGGAGCTTTTCGCCACCGATGAAAGACAGCAGGT
CGTCTTCACCATCATCAACCAGCGTTGCGAATATGTGGGCGAGATGGCTCCCGTCATCGACCGGCTGAAGGAAATGCGCA
GTAATGTGCTGGCGCTTTTCATCGGCCTTTTGAAAGTGGCCGAGCGGCGCGGCGAGCTTGCAAGCGAATGGAGCGCCGAA
ACGGCGGCGCAAATTCTGCTCGCCATGGTGGGTGGTTTTCTCAATGAATGGTTACACGGTGAAAAAGGTTTCGATCTCAT
CATCCATGGCAGCCGTGTGATTTCCACAGTGATCCAGTCGCTGCGCGCACCCGCAAATATCCCGCAGTAG

Upstream 100 bases:

>100_bases
GGGTGCTATAGTCAATTGCTTAATGCCATCAATCACGAATGAGTTATCGAAATTTGTGGGTTGAAACCAGAAATGGATTT
CAATTCATCCGGGAATCATC

Downstream 100 bases:

>100_bases
AGCATTTTCGAGCCAAACATGGGAAACGCCGATGCGTCGGATAATGCGCCAAAACAAAGAGTTAGGCTGTAGTGACGATT
CTGTTAAAATAGGAACCACT

Product: HTH-type transcriptional regulator TtgR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MRRTKAEAAETREAILLAAEQVFLERGVNQSTLTEIACYAGVTRGAIYFHFEDKLDIFQSIIGRARFPQEEIMLQAARFD
HPNPLHILEQSIVAALELFATDERQQVVFTIINQRCEYVGEMAPVIDRLKEMRSNVLALFIGLLKVAERRGELASEWSAE
TAAQILLAMVGGFLNEWLHGEKGFDLIIHGSRVISTVIQSLRAPANIPQ

Sequences:

>Translated_209_residues
MRRTKAEAAETREAILLAAEQVFLERGVNQSTLTEIACYAGVTRGAIYFHFEDKLDIFQSIIGRARFPQEEIMLQAARFD
HPNPLHILEQSIVAALELFATDERQQVVFTIINQRCEYVGEMAPVIDRLKEMRSNVLALFIGLLKVAERRGELASEWSAE
TAAQILLAMVGGFLNEWLHGEKGFDLIIHGSRVISTVIQSLRAPANIPQ
>Mature_209_residues
MRRTKAEAAETREAILLAAEQVFLERGVNQSTLTEIACYAGVTRGAIYFHFEDKLDIFQSIIGRARFPQEEIMLQAARFD
HPNPLHILEQSIVAALELFATDERQQVVFTIINQRCEYVGEMAPVIDRLKEMRSNVLALFIGLLKVAERRGELASEWSAE
TAAQILLAMVGGFLNEWLHGEKGFDLIIHGSRVISTVIQSLRAPANIPQ

Specific function: Represses expression of bepDE [H]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786669, Length=213, Percent_Identity=33.8028169014084, Blast_Score=107, Evalue=5e-25,
Organism=Escherichia coli, GI1789664, Length=209, Percent_Identity=29.1866028708134, Blast_Score=90, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR013572
- InterPro:   IPR001647 [H]

Pfam domain/function: PF08361 TetR_C_2; PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 23477; Mature: 23477

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRTKAEAAETREAILLAAEQVFLERGVNQSTLTEIACYAGVTRGAIYFHFEDKLDIFQS
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEEECHHHHHHHH
IIGRARFPQEEIMLQAARFDHPNPLHILEQSIVAALELFATDERQQVVFTIINQRCEYVG
HHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
EMAPVIDRLKEMRSNVLALFIGLLKVAERRGELASEWSAETAAQILLAMVGGFLNEWLHG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EKGFDLIIHGSRVISTVIQSLRAPANIPQ
CCCCEEEEECHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRRTKAEAAETREAILLAAEQVFLERGVNQSTLTEIACYAGVTRGAIYFHFEDKLDIFQS
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEEECHHHHHHHH
IIGRARFPQEEIMLQAARFDHPNPLHILEQSIVAALELFATDERQQVVFTIINQRCEYVG
HHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
EMAPVIDRLKEMRSNVLALFIGLLKVAERRGELASEWSAETAAQILLAMVGGFLNEWLHG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EKGFDLIIHGSRVISTVIQSLRAPANIPQ
CCCCEEEEECHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]