Click here to switch to the map view.

The map label for this gene is 225851797

Identifier: 225851797

GI number: 225851797

Start: 278349

End: 279176

Strand: Reverse

Name: 225851797

Synonym: BMEA_A0279

Alternate gene names: NA

Gene position: 279176-278349 (Counterclockwise)

Preceding gene: 225851799

Following gene: 225851791

Centisome position: 13.13

GC content: 46.86

Gene sequence:

>828_bases
ATGAGTTCGTACTCTTCTAATATTGATCGTTTGCAGCGCGAAATAGCGAGATTAAAGGCCGACGATTCAAGAGAGATGTC
TAAAGAGAAACAAGCCCAATCAAAAGCCCACAAAGCCCAACAAGCTATCAGTTCAGCAAAATCACTCTCCACACAGAAAA
GCAAAATGTCAGAGCTTGAGCGCGCCACGAGGGATGGTGCCGCGATTGGCAAGAAGCGAGCGGATATCGCCAAAAAAATT
GCCGATAAGGCAAAACAGTTAAGCTCCTATCAGGCTAAGCAATTCAAAGCTGATGAGCAGGCTGTTAAAAAGGTCGCGCA
GGAGCAAAAGCGTTTATCAGATGAGCGAACCAAGCATGAAGCTTTCATCAAACAATCATTGAGCTCCATGCGAACAACTG
CGAGCGCGACTATGGAAGCAGAAGAAGAATACGATTTCTTCATATCACATGCGAGCGAAGACAAAGAAGCATTCGTTCAG
GATCTAGTCGCCGCGCTTCGCGACCTAGGAGCTAAGATTTTCTATGACGCATATACGTTGAAGGTCGGTGACAGCCTTCG
GCGCAAAATCGATCAGGGGCTCGCGAACTCCAAATTTGGCATAGTTGTTCTATCGGAACACTTTTTTAGCAAGCAATGGC
CCGCAAGAGAATTAGATGGACTGACGGCAATGGAAATTGGCGGACAGACGCGAATATTGCCGATCTGGCATAAAGTTTCC
TACGATGAAGTTCGGCGTTTCAGTCCCTCATTGGCCGACAAAGTGGCACTGAACACATCGCTAAAGAGCGTGGAAGAAAT
CGCGAAAGAACTGCATTCCCTTATCTGA

Upstream 100 bases:

>100_bases
GAGGGGGAATTACTTCTACTGACAGCCGTCACTTGCTCTTTTGACCCGACTCATTGCTCAATCTTTTTACAGTCGGTAAC
GCTGACCAAATGGGGGCACC

Downstream 100 bases:

>100_bases
GGCAGATGCAAATATGGCCGTAAGCTTTATTACGGGAAATTTCCATATTAACCGAAGCGGATAAAAGCCGCCTCGCAGAA
CATAAAAACTGATTTCAATG

Product: hypothetical protein

Products: NA

Alternate protein names: Tir Protein; Lipoprotein

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MSSYSSNIDRLQREIARLKADDSREMSKEKQAQSKAHKAQQAISSAKSLSTQKSKMSELERATRDGAAIGKKRADIAKKI
ADKAKQLSSYQAKQFKADEQAVKKVAQEQKRLSDERTKHEAFIKQSLSSMRTTASATMEAEEEYDFFISHASEDKEAFVQ
DLVAALRDLGAKIFYDAYTLKVGDSLRRKIDQGLANSKFGIVVLSEHFFSKQWPARELDGLTAMEIGGQTRILPIWHKVS
YDEVRRFSPSLADKVALNTSLKSVEEIAKELHSLI

Sequences:

>Translated_275_residues
MSSYSSNIDRLQREIARLKADDSREMSKEKQAQSKAHKAQQAISSAKSLSTQKSKMSELERATRDGAAIGKKRADIAKKI
ADKAKQLSSYQAKQFKADEQAVKKVAQEQKRLSDERTKHEAFIKQSLSSMRTTASATMEAEEEYDFFISHASEDKEAFVQ
DLVAALRDLGAKIFYDAYTLKVGDSLRRKIDQGLANSKFGIVVLSEHFFSKQWPARELDGLTAMEIGGQTRILPIWHKVS
YDEVRRFSPSLADKVALNTSLKSVEEIAKELHSLI
>Mature_274_residues
SSYSSNIDRLQREIARLKADDSREMSKEKQAQSKAHKAQQAISSAKSLSTQKSKMSELERATRDGAAIGKKRADIAKKIA
DKAKQLSSYQAKQFKADEQAVKKVAQEQKRLSDERTKHEAFIKQSLSSMRTTASATMEAEEEYDFFISHASEDKEAFVQD
LVAALRDLGAKIFYDAYTLKVGDSLRRKIDQGLANSKFGIVVLSEHFFSKQWPARELDGLTAMEIGGQTRILPIWHKVSY
DEVRRFSPSLADKVALNTSLKSVEEIAKELHSLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30922; Mature: 30791

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: PS50104 TIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSYSSNIDRLQREIARLKADDSREMSKEKQAQSKAHKAQQAISSAKSLSTQKSKMSELE
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RATRDGAAIGKKRADIAKKIADKAKQLSSYQAKQFKADEQAVKKVAQEQKRLSDERTKHE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
AFIKQSLSSMRTTASATMEAEEEYDFFISHASEDKEAFVQDLVAALRDLGAKIFYDAYTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH
KVGDSLRRKIDQGLANSKFGIVVLSEHFFSKQWPARELDGLTAMEIGGQTRILPIWHKVS
HHHHHHHHHHHHCCCCCCCCEEEECHHHHCCCCCHHHHCCCHHHHCCCCEEEEHHHHHCC
YDEVRRFSPSLADKVALNTSLKSVEEIAKELHSLI
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SSYSSNIDRLQREIARLKADDSREMSKEKQAQSKAHKAQQAISSAKSLSTQKSKMSELE
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RATRDGAAIGKKRADIAKKIADKAKQLSSYQAKQFKADEQAVKKVAQEQKRLSDERTKHE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
AFIKQSLSSMRTTASATMEAEEEYDFFISHASEDKEAFVQDLVAALRDLGAKIFYDAYTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH
KVGDSLRRKIDQGLANSKFGIVVLSEHFFSKQWPARELDGLTAMEIGGQTRILPIWHKVS
HHHHHHHHHHHHCCCCCCCCEEEECHHHHCCCCCHHHHCCCHHHHCCCCEEEEHHHHHCC
YDEVRRFSPSLADKVALNTSLKSVEEIAKELHSLI
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA