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The map label for this gene is uxuR [H]

Identifier: 225686263

GI number: 225686263

Start: 427086

End: 427793

Strand: Reverse

Name: uxuR [H]

Synonym: BMEA_B0438

Alternate gene names: 225686263

Gene position: 427793-427086 (Counterclockwise)

Preceding gene: 225686270

Following gene: 225686259

Centisome position: 36.08

GC content: 55.08

Gene sequence:

>708_bases
ATGATTCTGCTTGAAACAAAAATGGCAAAAGAAAACAGCAATAGCGGTGCGCGCTGGTTTCCGGTCTATCAGGGCTTATG
TGAGGCCGTGGTTGGTCACAGCCTGTTGCCCGGTACCAAGCTGCCGGAAGACGAATTGGCTTCCATCTACACTGTTAGCC
GCGCCGTGGTACGATCGGCCCTTCAGGCTTTGGCCCATGATCGCCTCGTCCGGCTTGAGCCAAACCGCGGTGCATTCGTT
GCCGAACCATCACCGGAAGAGGCACGGGAGGTTTTCGAGGCTCGCTCACTGATAGAGCCAGAAATTGCCGCCCTTGCGGC
CAAAAAGGCAACGCCGAAGCAGATCGAGGAGCTGCGCCAGCATCTTGAACGCGAACATGATGCACTACAGGCAGGACACG
ACAGTGACGCCATCAGGCTTTCAGCACTCTTCCATTCCTATCTGGCGAAAATTGCAGGGCATTCCATTTTCGCCAGCTTT
GTAAGCGAGCTTTTGCCACGCTCCTCGCTGATTATCGCGCTCTACTGGCAACGCCGGGAAATCACATGCCAGAACGACGC
CCACCACGCTCTCGTCAACGCCATTGAAAAACATGACGCTCACGAAGCGGCTGCGCTGATGAAAACCCATATTCTGGATC
TGCTTAGCGGGTTGAGCCTCAATCGCATCAAGAAGGAACAGAAGCGGCTTGCCGATGTTCTGCGTTGA

Upstream 100 bases:

>100_bases
CACGGGTTTGATATAAAAGTAAGTTACTCCTTATAAGCATCGAGCCTGCTTCCCCCGCGCGCCTCCTGCTGCCTTCTGGG
CTTTATGTATCTGAACGATA

Downstream 100 bases:

>100_bases
AGCGGCCCATATCGGGAAGGCTTTACAGGGTTTTGGCGAGCCACCGGTCGTGGATAATCATCCCGACGGCCATGGCAAGC
ACGAATAAAGCGACCTGCGG

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MILLETKMAKENSNSGARWFPVYQGLCEAVVGHSLLPGTKLPEDELASIYTVSRAVVRSALQALAHDRLVRLEPNRGAFV
AEPSPEEAREVFEARSLIEPEIAALAAKKATPKQIEELRQHLEREHDALQAGHDSDAIRLSALFHSYLAKIAGHSIFASF
VSELLPRSSLIIALYWQRREITCQNDAHHALVNAIEKHDAHEAAALMKTHILDLLSGLSLNRIKKEQKRLADVLR

Sequences:

>Translated_235_residues
MILLETKMAKENSNSGARWFPVYQGLCEAVVGHSLLPGTKLPEDELASIYTVSRAVVRSALQALAHDRLVRLEPNRGAFV
AEPSPEEAREVFEARSLIEPEIAALAAKKATPKQIEELRQHLEREHDALQAGHDSDAIRLSALFHSYLAKIAGHSIFASF
VSELLPRSSLIIALYWQRREITCQNDAHHALVNAIEKHDAHEAAALMKTHILDLLSGLSLNRIKKEQKRLADVLR
>Mature_235_residues
MILLETKMAKENSNSGARWFPVYQGLCEAVVGHSLLPGTKLPEDELASIYTVSRAVVRSALQALAHDRLVRLEPNRGAFV
AEPSPEEAREVFEARSLIEPEIAALAAKKATPKQIEELRQHLEREHDALQAGHDSDAIRLSALFHSYLAKIAGHSIFASF
VSELLPRSSLIIALYWQRREITCQNDAHHALVNAIEKHDAHEAAALMKTHILDLLSGLSLNRIKKEQKRLADVLR

Specific function: Repressor for the uxuRBA operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787821, Length=131, Percent_Identity=32.824427480916, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 26196; Mature: 26196

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILLETKMAKENSNSGARWFPVYQGLCEAVVGHSLLPGTKLPEDELASIYTVSRAVVRSA
CEEECCHHHHCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LQALAHDRLVRLEPNRGAFVAEPSPEEAREVFEARSLIEPEIAALAAKKATPKQIEELRQ
HHHHHHCCEEEECCCCCCEECCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHH
HLEREHDALQAGHDSDAIRLSALFHSYLAKIAGHSIFASFVSELLPRSSLIIALYWQRRE
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC
ITCQNDAHHALVNAIEKHDAHEAAALMKTHILDLLSGLSLNRIKKEQKRLADVLR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MILLETKMAKENSNSGARWFPVYQGLCEAVVGHSLLPGTKLPEDELASIYTVSRAVVRSA
CEEECCHHHHCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LQALAHDRLVRLEPNRGAFVAEPSPEEAREVFEARSLIEPEIAALAAKKATPKQIEELRQ
HHHHHHCCEEEECCCCCCEECCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHH
HLEREHDALQAGHDSDAIRLSALFHSYLAKIAGHSIFASFVSELLPRSSLIIALYWQRRE
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC
ITCQNDAHHALVNAIEKHDAHEAAALMKTHILDLLSGLSLNRIKKEQKRLADVLR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]