Click here to switch to the map view.

The map label for this gene is araB [H]

Identifier: 225686117

GI number: 225686117

Start: 249978

End: 251582

Strand: Direct

Name: araB [H]

Synonym: BMEA_B0270

Alternate gene names: 225686117

Gene position: 249978-251582 (Clockwise)

Preceding gene: 225686116

Following gene: 225686122

Centisome position: 21.09

GC content: 59.56

Gene sequence:

>1605_bases
ATGACCAACTATTATCTGGGCGTCGATGTCGGCACCGGAAGCGCCCGGGCCGGGCTGTTCGACGCGGGTGGCACCATGCT
TGCATCGGCCAGGCGCGATATCGCCATATGGCGCGAGGCGGGCGGTATTGTCGAGCAGTCGAGCGACGATATATGGCAGG
CCGTTTGTGAAAGTGTTCGCGAAGTGGTCAGGGTTGCTGGCGTCGATCCCGCAGCCGTTGCCGGCATCGGCTATGATGCC
ACCTGTTCATTGGTCGTGCTGGGCGAGGGCGGCAAGCCGCTTGCCGTTGGCCCTTCCAACGATCGGGCGCGCAACATCAT
CGTCTGGATGGATCATCGCGCAGGTGAGCAGGCAGAGCGTATCAATACCACCAAAGCGGATGTGCTGGGTTATGTCGGCG
GCGCGATTTCGCCGGAAATGGAAACTCCGAAACTGCTCTGGCTGAAAGAACACAAGCCGGAAACGTTTGCTGCCGCCTGG
CAGTTTTTCGATCTGACCGATTTTCTCACATGGAAATCCTGTGGCAGTCTTGCCCGCTCGGCCTGTACCGTAACCTGCAA
ATGGACCTATCTCAGCCATGAAAAGCGTTGGGACGAGACCTATTTCCGCGCAGTCGGCCTTGGCGAACTCGCGGATGAAA
GTTTCGTCCGCATCGGTACAGACGTTCGCGCCGGTGGCGAAAATCTTGGCGGCTTGAGCAAACAGGCCGCAGCCGAACTG
GGCTTGAGGCCGGGTACGGCAATTGCCGCCGGTCTGATCGATGCACATGCGGGCGGTATCGGCACGGTGGGCGCGCGCGG
TTCGGAAGGTCGGATATTGTCGCGTATGGCCTATGTGTTCGGCACATCGGCCTGCACCATGACCACCACTGAACAGCCTG
TTTTCGTGGATGGTGTCTGGGGGCCTTATTTCTCGGCCATGGTGCCGGGGCTGTGGTTGAACGAAGGCGGACAATCGGCT
GCGGGTGCCGCTATTGATCATCTGATTCACATGCATCCCTTCGCGGCGGAAGCCGAAAAGGCAGCGGCGGATCAAGGCAA
GGGGCTGGCAGACAGCCTCGCTGCCGAAGTTGAAGCTAGAGGTGGTCCTGAAAAAACGGCCATGATCGTTGGCGACATTC
ATGTCGTGCCGGAATTCCTCGGTAATCGTGCACCTTTCGCCGATCCTGATGCGCGTGCGGTTATTGCGGGGCTGGACCTT
GATACAGGCATGGACAGTCTGGCGGCACTTTATCTCGCCGGGCTTTGCGGGCTTGGCTATGGTGTGCGGCAGATTATCGA
AGCGCAGCGGGCCAAAGGTATTGTGACTGACACTATTGTTGTTTCGGGTGGCGCGGCGCGCTCAAATCTCGTGCGGCAGG
TGCTCGCCGATGCGACCGGCCTCGTTGTTACCGCTTCGACATCGCCGGAGCCGGTTCTGCTCGGCTCGGCCATGTTAGGT
GCGGTTGCGTCCGGTGCTTATCCCGATCTTGTGACGGCTATGCAAGTCATGTCGGAATTAGGCGCACGCAACAGGCCGGA
CGCCAGGCGTGCAAAATGGCATGACCACCGTTTTGAGGCGTTCATGTTGCTTCAGGCGACTGCCCGCAAGATCCGCTATC
TCTAA

Upstream 100 bases:

>100_bases
TGCGGAATCCGTGATGTTCATGCTGACACGCCCGCGCAATATCACCATCCGCGATCTGGTTATTCTTCCGCAAAGTCTCG
ATCTCTAAATGGGAGCGACC

Downstream 100 bases:

>100_bases
GCTGTAGAGACCGTCGAATATTGGCGTGGCCACTGGCTATGAAGGCCTGGTCGCGCCATTTGCCAGACTGCTTCGTCATT
AGGGCCAGTCCCGCAAGGGC

Product: FGGY-family pentulose kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 534; Mature: 533

Protein sequence:

>534_residues
MTNYYLGVDVGTGSARAGLFDAGGTMLASARRDIAIWREAGGIVEQSSDDIWQAVCESVREVVRVAGVDPAAVAGIGYDA
TCSLVVLGEGGKPLAVGPSNDRARNIIVWMDHRAGEQAERINTTKADVLGYVGGAISPEMETPKLLWLKEHKPETFAAAW
QFFDLTDFLTWKSCGSLARSACTVTCKWTYLSHEKRWDETYFRAVGLGELADESFVRIGTDVRAGGENLGGLSKQAAAEL
GLRPGTAIAAGLIDAHAGGIGTVGARGSEGRILSRMAYVFGTSACTMTTTEQPVFVDGVWGPYFSAMVPGLWLNEGGQSA
AGAAIDHLIHMHPFAAEAEKAAADQGKGLADSLAAEVEARGGPEKTAMIVGDIHVVPEFLGNRAPFADPDARAVIAGLDL
DTGMDSLAALYLAGLCGLGYGVRQIIEAQRAKGIVTDTIVVSGGAARSNLVRQVLADATGLVVTASTSPEPVLLGSAMLG
AVASGAYPDLVTAMQVMSELGARNRPDARRAKWHDHRFEAFMLLQATARKIRYL

Sequences:

>Translated_534_residues
MTNYYLGVDVGTGSARAGLFDAGGTMLASARRDIAIWREAGGIVEQSSDDIWQAVCESVREVVRVAGVDPAAVAGIGYDA
TCSLVVLGEGGKPLAVGPSNDRARNIIVWMDHRAGEQAERINTTKADVLGYVGGAISPEMETPKLLWLKEHKPETFAAAW
QFFDLTDFLTWKSCGSLARSACTVTCKWTYLSHEKRWDETYFRAVGLGELADESFVRIGTDVRAGGENLGGLSKQAAAEL
GLRPGTAIAAGLIDAHAGGIGTVGARGSEGRILSRMAYVFGTSACTMTTTEQPVFVDGVWGPYFSAMVPGLWLNEGGQSA
AGAAIDHLIHMHPFAAEAEKAAADQGKGLADSLAAEVEARGGPEKTAMIVGDIHVVPEFLGNRAPFADPDARAVIAGLDL
DTGMDSLAALYLAGLCGLGYGVRQIIEAQRAKGIVTDTIVVSGGAARSNLVRQVLADATGLVVTASTSPEPVLLGSAMLG
AVASGAYPDLVTAMQVMSELGARNRPDARRAKWHDHRFEAFMLLQATARKIRYL
>Mature_533_residues
TNYYLGVDVGTGSARAGLFDAGGTMLASARRDIAIWREAGGIVEQSSDDIWQAVCESVREVVRVAGVDPAAVAGIGYDAT
CSLVVLGEGGKPLAVGPSNDRARNIIVWMDHRAGEQAERINTTKADVLGYVGGAISPEMETPKLLWLKEHKPETFAAAWQ
FFDLTDFLTWKSCGSLARSACTVTCKWTYLSHEKRWDETYFRAVGLGELADESFVRIGTDVRAGGENLGGLSKQAAAELG
LRPGTAIAAGLIDAHAGGIGTVGARGSEGRILSRMAYVFGTSACTMTTTEQPVFVDGVWGPYFSAMVPGLWLNEGGQSAA
GAAIDHLIHMHPFAAEAEKAAADQGKGLADSLAAEVEARGGPEKTAMIVGDIHVVPEFLGNRAPFADPDARAVIAGLDLD
TGMDSLAALYLAGLCGLGYGVRQIIEAQRAKGIVTDTIVVSGGAARSNLVRQVLADATGLVVTASTSPEPVLLGSAMLGA
VASGAYPDLVTAMQVMSELGARNRPDARRAKWHDHRFEAFMLLQATARKIRYL

Specific function: L-lyxose utilization. [C]

COG id: COG1069

COG function: function code C; Ribulose kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulokinase family [H]

Homologues:

Organism=Homo sapiens, GI164663828, Length=530, Percent_Identity=45.4716981132076, Blast_Score=452, Evalue=1e-127,
Organism=Homo sapiens, GI164663830, Length=554, Percent_Identity=43.5018050541516, Blast_Score=439, Evalue=1e-123,
Organism=Escherichia coli, GI1790005, Length=536, Percent_Identity=24.2537313432836, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1786249, Length=563, Percent_Identity=25.3996447602131, Blast_Score=89, Evalue=1e-18,
Organism=Escherichia coli, GI1787789, Length=535, Percent_Identity=24.6728971962617, Blast_Score=86, Evalue=6e-18,
Organism=Escherichia coli, GI1789987, Length=534, Percent_Identity=23.4082397003745, Blast_Score=85, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6320314, Length=522, Percent_Identity=39.272030651341, Blast_Score=349, Evalue=5e-97,
Organism=Saccharomyces cerevisiae, GI6324080, Length=463, Percent_Identity=23.5421166306695, Blast_Score=119, Evalue=9e-28,
Organism=Drosophila melanogaster, GI24657106, Length=538, Percent_Identity=42.7509293680297, Blast_Score=419, Evalue=1e-117,
Organism=Drosophila melanogaster, GI24657102, Length=538, Percent_Identity=42.7509293680297, Blast_Score=419, Evalue=1e-117,
Organism=Drosophila melanogaster, GI21356323, Length=432, Percent_Identity=40.7407407407407, Blast_Score=311, Evalue=7e-85,
Organism=Drosophila melanogaster, GI17864214, Length=505, Percent_Identity=23.7623762376238, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24654573, Length=459, Percent_Identity=23.0936819172113, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018484
- InterPro:   IPR005929 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.16 [H]

Molecular weight: Translated: 56255; Mature: 56124

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNYYLGVDVGTGSARAGLFDAGGTMLASARRDIAIWREAGGIVEQSSDDIWQAVCESVR
CCEEEEEEEECCCCCCCCEECCCCHHHHHCCCCCEEEHHCCCCCCCCCHHHHHHHHHHHH
EVVRVAGVDPAAVAGIGYDATCSLVVLGEGGKPLAVGPSNDRARNIIVWMDHRAGEQAER
HHHHHCCCCHHHHCCCCCCCEEEEEEECCCCCEEEECCCCCCCCEEEEEEECCCCCHHHH
INTTKADVLGYVGGAISPEMETPKLLWLKEHKPETFAAAWQFFDLTDFLTWKSCGSLARS
HCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
ACTVTCKWTYLSHEKRWDETYFRAVGLGELADESFVRIGTDVRAGGENLGGLSKQAAAEL
EEEEEEEEEEECCHHHHHHHHHHHCCCCHHCCCCCEEECCCCCCCCCCCCCCHHHHHHHH
GLRPGTAIAAGLIDAHAGGIGTVGARGSEGRILSRMAYVFGTSACTMTTTEQPVFVDGVW
CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCEEEECCC
GPYFSAMVPGLWLNEGGQSAAGAAIDHLIHMHPFAAEAEKAAADQGKGLADSLAAEVEAR
HHHHHHHCCCCEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCC
GGPEKTAMIVGDIHVVPEFLGNRAPFADPDARAVIAGLDLDTGMDSLAALYLAGLCGLGY
CCCCCEEEEEEHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCH
GVRQIIEAQRAKGIVTDTIVVSGGAARSNLVRQVLADATGLVVTASTSPEPVLLGSAMLG
HHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEHHHHHH
AVASGAYPDLVTAMQVMSELGARNRPDARRAKWHDHRFEAFMLLQATARKIRYL
HHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TNYYLGVDVGTGSARAGLFDAGGTMLASARRDIAIWREAGGIVEQSSDDIWQAVCESVR
CEEEEEEEECCCCCCCCEECCCCHHHHHCCCCCEEEHHCCCCCCCCCHHHHHHHHHHHH
EVVRVAGVDPAAVAGIGYDATCSLVVLGEGGKPLAVGPSNDRARNIIVWMDHRAGEQAER
HHHHHCCCCHHHHCCCCCCCEEEEEEECCCCCEEEECCCCCCCCEEEEEEECCCCCHHHH
INTTKADVLGYVGGAISPEMETPKLLWLKEHKPETFAAAWQFFDLTDFLTWKSCGSLARS
HCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
ACTVTCKWTYLSHEKRWDETYFRAVGLGELADESFVRIGTDVRAGGENLGGLSKQAAAEL
EEEEEEEEEEECCHHHHHHHHHHHCCCCHHCCCCCEEECCCCCCCCCCCCCCHHHHHHHH
GLRPGTAIAAGLIDAHAGGIGTVGARGSEGRILSRMAYVFGTSACTMTTTEQPVFVDGVW
CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCEEEECCC
GPYFSAMVPGLWLNEGGQSAAGAAIDHLIHMHPFAAEAEKAAADQGKGLADSLAAEVEAR
HHHHHHHCCCCEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCC
GGPEKTAMIVGDIHVVPEFLGNRAPFADPDARAVIAGLDLDTGMDSLAALYLAGLCGLGY
CCCCCEEEEEEHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCH
GVRQIIEAQRAKGIVTDTIVVSGGAARSNLVRQVLADATGLVVTASTSPEPVLLGSAMLG
HHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEHHHHHH
AVASGAYPDLVTAMQVMSELGARNRPDARRAKWHDHRFEAFMLLQATARKIRYL
HHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA