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The map label for this gene is dapA [H]

Identifier: 225686089

GI number: 225686089

Start: 225329

End: 226291

Strand: Direct

Name: dapA [H]

Synonym: BMEA_B0240

Alternate gene names: 225686089

Gene position: 225329-226291 (Clockwise)

Preceding gene: 225686088

Following gene: 225686092

Centisome position: 19.01

GC content: 58.88

Gene sequence:

>963_bases
TTGAAAGCCGAGATTTTTTCCGGGGTGATCCCCGCTCTGATGACACCGTGCAAGCCGGACCGCAGCCCTGATTTCGATGC
GCTCGTGCGCAAGGGGCAGGAGCTGATTGGCGATGGTATGTCGGCGGTCGTCTATTGTGGTTCGATGGGCGATTGGCCGC
TTCTGACGGATGCGCAGCGCATGGAGGGCGTGGAGCGTCTGGTAAAGGCCGGTATTCCCGTTATCGTCGGCACCGGCGCA
GTCAATACGGCATCGGCTGTCGCTCATGCCGCACACGCGCAGAAAGTGGGCGCAAAGGGCCTTATGGTGATCCCGCGCGT
TCTGTCTCGCGGCTCGGCCATTGCGGCGCAGAAGGCATATTTCAAGGCAATCCTTTCGGCGGCGCCGGACCTGCCTGCGG
TGATCTATAACAGCCCCTATTACGGCTTTGCCACGCGTGCCGATCTGTTTTTTGACCTGCGCGCCGAACATCCAAATCTC
GTTGGCTTCAAGGAATTCGGCGGCCCGGCGGACATGCGTTATGCGGCGGAAAACATCACCAGCCGTGATGATGGTGTTTC
GCTGATGATCGGCGTCGATACGGCCGTGTTCCATGGTTTTGTGAATTGCGGCGCAACGGGTGCGATTACCGGCATCGGCA
ATGTGCTGCCAAAAGAAGTCATTCACCTTTGCAATCTCTCGCAGGCAGCCGCCTTGGGCGATGTCGATGCGCGCCAGCGC
GCACAGGAACTGGAACAGGCGCTTGCCGTCCTGTCCTCTTTCGATGAGGGACCGGATCTGGTCCTCTACTTCAAGCACAT
GATGGTGCTGAAGGGGGACAAGGAATATACGCTGCATTTCAACGAGACCGACGCATTGAGCGAAAGCCAGCGCGGCTATG
TCGAAACGCAGTTCAGGCTTTTCAACACCTGGTATGCCGAGTGGAGCAAACTGCCGGGTGCCGTACAGCGCTGCAAGGCG
TGA

Upstream 100 bases:

>100_bases
CTTTGTATTTTTCTTGTCGACAAGAAAAATTTAAGCTAGATTGCCTTCGATCGAGGCACGGATGAACCATGCCGGCCGAT
AGGAAATTGAGGAGTGTGAC

Downstream 100 bases:

>100_bases
TCAAGCAATGCCTTATGTAAAAAGGCCCTCCCGTTGCGGAGGGCCTTTTGCTTTGGATTTTATCACGAAACAGCGTCGAG
GCCCTTTTCGGCAAGCTGGT

Product: dihydrodipicolinate synthetase

Products: NA

Alternate protein names: DHDPS [H]

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MKAEIFSGVIPALMTPCKPDRSPDFDALVRKGQELIGDGMSAVVYCGSMGDWPLLTDAQRMEGVERLVKAGIPVIVGTGA
VNTASAVAHAAHAQKVGAKGLMVIPRVLSRGSAIAAQKAYFKAILSAAPDLPAVIYNSPYYGFATRADLFFDLRAEHPNL
VGFKEFGGPADMRYAAENITSRDDGVSLMIGVDTAVFHGFVNCGATGAITGIGNVLPKEVIHLCNLSQAAALGDVDARQR
AQELEQALAVLSSFDEGPDLVLYFKHMMVLKGDKEYTLHFNETDALSESQRGYVETQFRLFNTWYAEWSKLPGAVQRCKA

Sequences:

>Translated_320_residues
MKAEIFSGVIPALMTPCKPDRSPDFDALVRKGQELIGDGMSAVVYCGSMGDWPLLTDAQRMEGVERLVKAGIPVIVGTGA
VNTASAVAHAAHAQKVGAKGLMVIPRVLSRGSAIAAQKAYFKAILSAAPDLPAVIYNSPYYGFATRADLFFDLRAEHPNL
VGFKEFGGPADMRYAAENITSRDDGVSLMIGVDTAVFHGFVNCGATGAITGIGNVLPKEVIHLCNLSQAAALGDVDARQR
AQELEQALAVLSSFDEGPDLVLYFKHMMVLKGDKEYTLHFNETDALSESQRGYVETQFRLFNTWYAEWSKLPGAVQRCKA
>Mature_320_residues
MKAEIFSGVIPALMTPCKPDRSPDFDALVRKGQELIGDGMSAVVYCGSMGDWPLLTDAQRMEGVERLVKAGIPVIVGTGA
VNTASAVAHAAHAQKVGAKGLMVIPRVLSRGSAIAAQKAYFKAILSAAPDLPAVIYNSPYYGFATRADLFFDLRAEHPNL
VGFKEFGGPADMRYAAENITSRDDGVSLMIGVDTAVFHGFVNCGATGAITGIGNVLPKEVIHLCNLSQAAALGDVDARQR
AQELEQALAVLSSFDEGPDLVLYFKHMMVLKGDKEYTLHFNETDALSESQRGYVETQFRLFNTWYAEWSKLPGAVQRCKA

Specific function: Unknown

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

Organism=Homo sapiens, GI31543060, Length=256, Percent_Identity=25.78125, Blast_Score=69, Evalue=7e-12,
Organism=Escherichia coli, GI87082415, Length=226, Percent_Identity=27.8761061946903, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1786463, Length=240, Percent_Identity=26.6666666666667, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005263
- InterPro:   IPR002220
- InterPro:   IPR020625
- InterPro:   IPR020624 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: =4.2.1.52 [H]

Molecular weight: Translated: 34479; Mature: 34479

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAEIFSGVIPALMTPCKPDRSPDFDALVRKGQELIGDGMSAVVYCGSMGDWPLLTDAQR
CCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHH
MEGVERLVKAGIPVIVGTGAVNTASAVAHAAHAQKVGAKGLMVIPRVLSRGSAIAAQKAY
HHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHH
FKAILSAAPDLPAVIYNSPYYGFATRADLFFDLRAEHPNLVGFKEFGGPADMRYAAENIT
HHHHHHCCCCCCEEEECCCCCCCEEHHHEEEEEECCCCCEECCHHCCCCHHHHHHHHHCC
SRDDGVSLMIGVDTAVFHGFVNCGATGAITGIGNVLPKEVIHLCNLSQAAALGDVDARQR
CCCCCEEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHH
AQELEQALAVLSSFDEGPDLVLYFKHMMVLKGDKEYTLHFNETDALSESQRGYVETQFRL
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCHHHHHHH
FNTWYAEWSKLPGAVQRCKA
HHHHHHHHHHCHHHHHHHCC
>Mature Secondary Structure
MKAEIFSGVIPALMTPCKPDRSPDFDALVRKGQELIGDGMSAVVYCGSMGDWPLLTDAQR
CCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHH
MEGVERLVKAGIPVIVGTGAVNTASAVAHAAHAQKVGAKGLMVIPRVLSRGSAIAAQKAY
HHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHH
FKAILSAAPDLPAVIYNSPYYGFATRADLFFDLRAEHPNLVGFKEFGGPADMRYAAENIT
HHHHHHCCCCCCEEEECCCCCCCEEHHHEEEEEECCCCCEECCHHCCCCHHHHHHHHHCC
SRDDGVSLMIGVDTAVFHGFVNCGATGAITGIGNVLPKEVIHLCNLSQAAALGDVDARQR
CCCCCEEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHH
AQELEQALAVLSSFDEGPDLVLYFKHMMVLKGDKEYTLHFNETDALSESQRGYVETQFRL
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCHHHHHHH
FNTWYAEWSKLPGAVQRCKA
HHHHHHHHHHCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA