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The map label for this gene is qseB [H]

Identifier: 225686080

GI number: 225686080

Start: 216895

End: 217572

Strand: Reverse

Name: qseB [H]

Synonym: BMEA_B0229

Alternate gene names: 225686080

Gene position: 217572-216895 (Counterclockwise)

Preceding gene: 225686081

Following gene: 225686079

Centisome position: 18.35

GC content: 57.82

Gene sequence:

>678_bases
ATGAGAATTATCCTCATCGAAGACGACCCCATTCTAGGCGCTGCCGTGCGCGACCACATCGCGGCTGAAGGCCATTGCGT
TGATTGGGTCAGCCGTCTCGACACCGCCCATGACTACATGGAGAGCGCGCGCTACGATCTCGTTCTTCTGGATTTGATGC
TGCCGGACGGGCAAGGCCTGTCCTTCTTGCGTGATCTGCGCACAAAGGGCTGTTCCACGCCTGTCATCATATTGACGGCC
CTGGACCAGATTTCCGACCGCATTCAGGGACTGAACGCAGGCGCCGACGATTATCTGACGAAGCCCTTCGATCTTTCCGA
GCTTTCCGCACGGCTGAACGCGGTAGCGCGGCGCTATAGCGGCAATCCCAATCCCCTGATCGAAATCGGCGGCTTGCAGA
TCGACCTTGCAGCCAAGTCCGTCATGCGCGACGGGCGCGCACTTTGCCTTACCGCGCGCGAATGGGCATTGCTGGAGGCT
TTTCTCCAGCATCCGGGCCAGACCCTGTCCAAGGCCCAGCTTGAAGAACACCTCTATTCTTTCGATACGGAAGTCGAAAG
CAACACAATGGAGGTTCATGTGAGCCGCCTGCGCAAAAAACTCGGCCACGCGATCATCGAAACGGTTCGCGGCATTGGCT
ACCGGCTTGGCAATAGCAAATCGAAAGCAGCACGATGA

Upstream 100 bases:

>100_bases
CACCCTTTCCTGACAGGTAGCTGAAGCCGAAAAACTTTTCCTGTCAGGCAATTGTCAGGTTTATCCGGCAAGAAGGCAGG
CAAGCAGGAACGACCAAGGC

Downstream 100 bases:

>100_bases
TGCGCCCGCGCAGCCTGCAATGGCGCATTTCATTATGGCTGGGGCTTGGCATTTCGATGCTCTGGGCCATCGCAGCCCTT
GTGACCGCCTCGCAGCTCAG

Product: DNA-binding response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MRIILIEDDPILGAAVRDHIAAEGHCVDWVSRLDTAHDYMESARYDLVLLDLMLPDGQGLSFLRDLRTKGCSTPVIILTA
LDQISDRIQGLNAGADDYLTKPFDLSELSARLNAVARRYSGNPNPLIEIGGLQIDLAAKSVMRDGRALCLTAREWALLEA
FLQHPGQTLSKAQLEEHLYSFDTEVESNTMEVHVSRLRKKLGHAIIETVRGIGYRLGNSKSKAAR

Sequences:

>Translated_225_residues
MRIILIEDDPILGAAVRDHIAAEGHCVDWVSRLDTAHDYMESARYDLVLLDLMLPDGQGLSFLRDLRTKGCSTPVIILTA
LDQISDRIQGLNAGADDYLTKPFDLSELSARLNAVARRYSGNPNPLIEIGGLQIDLAAKSVMRDGRALCLTAREWALLEA
FLQHPGQTLSKAQLEEHLYSFDTEVESNTMEVHVSRLRKKLGHAIIETVRGIGYRLGNSKSKAAR
>Mature_225_residues
MRIILIEDDPILGAAVRDHIAAEGHCVDWVSRLDTAHDYMESARYDLVLLDLMLPDGQGLSFLRDLRTKGCSTPVIILTA
LDQISDRIQGLNAGADDYLTKPFDLSELSARLNAVARRYSGNPNPLIEIGGLQIDLAAKSVMRDGRALCLTAREWALLEA
FLQHPGQTLSKAQLEEHLYSFDTEVESNTMEVHVSRLRKKLGHAIIETVRGIGYRLGNSKSKAAR

Specific function: Member of a two-component regulatory system qseB/qseC. Activates the flagella regulon by activating transcription of flhDC. Currently it is not known whether this effect is direct or not [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=219, Percent_Identity=44.2922374429224, Blast_Score=186, Evalue=1e-48,
Organism=Escherichia coli, GI1790552, Length=216, Percent_Identity=41.2037037037037, Blast_Score=167, Evalue=4e-43,
Organism=Escherichia coli, GI1786784, Length=221, Percent_Identity=34.3891402714932, Blast_Score=145, Evalue=3e-36,
Organism=Escherichia coli, GI1787375, Length=219, Percent_Identity=36.986301369863, Blast_Score=142, Evalue=2e-35,
Organism=Escherichia coli, GI1786599, Length=224, Percent_Identity=37.5, Blast_Score=141, Evalue=4e-35,
Organism=Escherichia coli, GI1786911, Length=223, Percent_Identity=35.8744394618834, Blast_Score=132, Evalue=1e-32,
Organism=Escherichia coli, GI87082012, Length=218, Percent_Identity=36.2385321100917, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1789809, Length=234, Percent_Identity=33.3333333333333, Blast_Score=123, Evalue=9e-30,
Organism=Escherichia coli, GI1788394, Length=227, Percent_Identity=33.920704845815, Blast_Score=119, Evalue=1e-28,
Organism=Escherichia coli, GI1787229, Length=223, Percent_Identity=32.2869955156951, Blast_Score=110, Evalue=7e-26,
Organism=Escherichia coli, GI1790860, Length=222, Percent_Identity=32.4324324324324, Blast_Score=107, Evalue=7e-25,
Organism=Escherichia coli, GI2367329, Length=231, Percent_Identity=32.9004329004329, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI1790863, Length=229, Percent_Identity=28.3842794759825, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI145693140, Length=229, Percent_Identity=30.1310043668122, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1788550, Length=108, Percent_Identity=30.5555555555556, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 24935; Mature: 24935

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIILIEDDPILGAAVRDHIAAEGHCVDWVSRLDTAHDYMESARYDLVLLDLMLPDGQGL
CEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCH
SFLRDLRTKGCSTPVIILTALDQISDRIQGLNAGADDYLTKPFDLSELSARLNAVARRYS
HHHHHHHHCCCCCCEEHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHC
GNPNPLIEIGGLQIDLAAKSVMRDGRALCLTAREWALLEAFLQHPGQTLSKAQLEEHLYS
CCCCCEEEECCEEEHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
FDTEVESNTMEVHVSRLRKKLGHAIIETVRGIGYRLGNSKSKAAR
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRIILIEDDPILGAAVRDHIAAEGHCVDWVSRLDTAHDYMESARYDLVLLDLMLPDGQGL
CEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCH
SFLRDLRTKGCSTPVIILTALDQISDRIQGLNAGADDYLTKPFDLSELSARLNAVARRYS
HHHHHHHHCCCCCCEEHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHC
GNPNPLIEIGGLQIDLAAKSVMRDGRALCLTAREWALLEAFLQHPGQTLSKAQLEEHLYS
CCCCCEEEECCEEEHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
FDTEVESNTMEVHVSRLRKKLGHAIIETVRGIGYRLGNSKSKAAR
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796; 11929534 [H]