Definition | Brucella melitensis ATCC 23457 chromosome chromosome II, complete sequence. |
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Accession | NC_012442 |
Length | 1,185,518 |
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The map label for this gene is ydjC [C]
Identifier: 225685997
GI number: 225685997
Start: 130950
End: 131702
Strand: Direct
Name: ydjC [C]
Synonym: BMEA_B0140
Alternate gene names: 225685997
Gene position: 130950-131702 (Clockwise)
Preceding gene: 225685996
Following gene: 225685998
Centisome position: 11.05
GC content: 59.63
Gene sequence:
>753_bases ATGATGCGGATCGCGGATGATTTTCGGCTAGGGCGCGGACATGACCGGGTCATCCTGTCGCTGCTCGAAACCGGGCGGCT TGATGGTACGTCAGTCATGATGAACGATGCAATGAACCCTGAAGACATCGCCCGGCTGCGGAAATTGCGTGCCGGTGGTG CGAAAGTCGGGTTGCATCTGAACCTGACACAGGCACTTCCGGGTGGCGGCCCCATCTGGCCGCTGGGCGAATTGATACGG CCGTTATTGGGTGCACCCTTTCTGGGCGCGATCACAGCATCTCTGGTGCGGCAGGTAGATGCGTTCGTGACACAATTCGG CAGCCTGCCCGATTATTATGACGGCCATCAGCATTGTCATTGTTTTCCGGCGATAGCGCCTCTCGTGGCCCGCTTGTCCT ATGGCCCGGCTACATGGGTGCGTGTGCCGTTGCCTGCCACATGGGAGGGGCGCTGGCTCAATATTCGCGCTGGCGGTGCA AAGGTTCTGCTTATCCTGGCGCTGGCGGCAAGAGCGCGCGCCATTTTTGTCAGGGCAGGACTGAAAACAAACCATGACTT TTCAGGGTTTCTGCGCCTTGGCGATCCAGCCAGTGTTCGGCGCTGGTTGCCTGAGCTTCTGGCCCGGGCAACACCGGACT GCCTGATAATGCTCCATCCCGGTGATGGCGCAGATCCTGTGCAATGCGCCGGGCACGCGGCTGGCAGCCGCGCCATCGAA GCCCGAATCCTGTTTGAAAGTCCGATAAAATGA
Upstream 100 bases:
>100_bases TTCCTCGGGCTGCTTGGCGAGTATATCGGTAAGTCCGTATTGGAAGCCAAGAAACGCCCGATCTACATTCTGGCTGAAGA TATCCGCCGCAAGGAAAGCG
Downstream 100 bases:
>100_bases TGAAGAACCGTGCTATCGTCTGGGGCCTGTTTCTGCTGCTTTTTGTGCGGCTCCTCGCGATGATCTGGGTTCCCCTGACA GACCCGACCGAGGCACGCTA
Product: YdjC family protein
Products: NA
Alternate protein names: YdjC-Like Protein; Cellobiose Phosphorylase
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MMRIADDFRLGRGHDRVILSLLETGRLDGTSVMMNDAMNPEDIARLRKLRAGGAKVGLHLNLTQALPGGGPIWPLGELIR PLLGAPFLGAITASLVRQVDAFVTQFGSLPDYYDGHQHCHCFPAIAPLVARLSYGPATWVRVPLPATWEGRWLNIRAGGA KVLLILALAARARAIFVRAGLKTNHDFSGFLRLGDPASVRRWLPELLARATPDCLIMLHPGDGADPVQCAGHAAGSRAIE ARILFESPIK
Sequences:
>Translated_250_residues MMRIADDFRLGRGHDRVILSLLETGRLDGTSVMMNDAMNPEDIARLRKLRAGGAKVGLHLNLTQALPGGGPIWPLGELIR PLLGAPFLGAITASLVRQVDAFVTQFGSLPDYYDGHQHCHCFPAIAPLVARLSYGPATWVRVPLPATWEGRWLNIRAGGA KVLLILALAARARAIFVRAGLKTNHDFSGFLRLGDPASVRRWLPELLARATPDCLIMLHPGDGADPVQCAGHAAGSRAIE ARILFESPIK >Mature_250_residues MMRIADDFRLGRGHDRVILSLLETGRLDGTSVMMNDAMNPEDIARLRKLRAGGAKVGLHLNLTQALPGGGPIWPLGELIR PLLGAPFLGAITASLVRQVDAFVTQFGSLPDYYDGHQHCHCFPAIAPLVARLSYGPATWVRVPLPATWEGRWLNIRAGGA KVLLILALAARARAIFVRAGLKTNHDFSGFLRLGDPASVRRWLPELLARATPDCLIMLHPGDGADPVQCAGHAAGSRAIE ARILFESPIK
Specific function: Unknown
COG id: COG3394
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27053; Mature: 27053
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: PS00074 GLFV_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRIADDFRLGRGHDRVILSLLETGRLDGTSVMMNDAMNPEDIARLRKLRAGGAKVGLHL CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEEE NLTQALPGGGPIWPLGELIRPLLGAPFLGAITASLVRQVDAFVTQFGSLPDYYDGHQHCH EEHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE CFPAIAPLVARLSYGPATWVRVPLPATWEGRWLNIRAGGAKVLLILALAARARAIFVRAG EHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHEEEEECC LKTNHDFSGFLRLGDPASVRRWLPELLARATPDCLIMLHPGDGADPVQCAGHAAGSRAIE CCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHCCCCCCCCEEE ARILFESPIK EEEEECCCCC >Mature Secondary Structure MMRIADDFRLGRGHDRVILSLLETGRLDGTSVMMNDAMNPEDIARLRKLRAGGAKVGLHL CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEEE NLTQALPGGGPIWPLGELIRPLLGAPFLGAITASLVRQVDAFVTQFGSLPDYYDGHQHCH EEHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE CFPAIAPLVARLSYGPATWVRVPLPATWEGRWLNIRAGGAKVLLILALAARARAIFVRAG EHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHEEEEECC LKTNHDFSGFLRLGDPASVRRWLPELLARATPDCLIMLHPGDGADPVQCAGHAAGSRAIE CCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHCCCCCCCCEEE ARILFESPIK EEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA