Click here to switch to the map view.

The map label for this gene is flgF [H]

Identifier: 225685989

GI number: 225685989

Start: 125366

End: 126097

Strand: Direct

Name: flgF [H]

Synonym: BMEA_B0131

Alternate gene names: 225685989

Gene position: 125366-126097 (Clockwise)

Preceding gene: 225685988

Following gene: 225685990

Centisome position: 10.57

GC content: 59.43

Gene sequence:

>732_bases
ATGCAGAACAATTCGATCTATGTCGGGCTTTCCTCGCTCATCACGCTGGAACGGCGGATGGATGCGATTGCTCATAATGT
AGCCAATGCCTCCACGGTCGGCTTTCGCGGCGAGGGTACGAAGTTTGACACCATCGTTTCCGACAAGGCCAGCGACGATG
TGAGCTTTGCCACAGCGGGCAAGAGCTATATTCGCACGGAAGCAGGCCCGCTGATCAAGACCGACAATCCGCTGGATGTG
GCCGTGAAGGGCGATGCATGGATGTCGTTCTCCACCCCGCAAGGGCAGGTCTATTCACGCGATGGGCGCATGAAGATGCT
GTCCACAGGCGACCCTGTTTCCGTCACCGGCAATGCGATCCTCGATGTCGGCGGTGCGCCCATTGTGCTCAATCCGGGCG
GTGGTGCGCCCAGGATATCGAGCGACGGCGCGATCTACCAGAATGGTGTACAGGTTGGGGCGATCGGCCTTTACACCATC
CCGGCCGATGCCGATCTCGCCTATGCGGGCACTTCCGGCGTGATCCCCAGCAAGCCGGCCCAGCCGGTGGTGGACGATAA
CAGTGTCGGCGTCGTGCAGGGCATGATTGAAGGCTCCAATGTGGATGCCATGACGGAGATGACCCGCCTCATCAGCATCA
GCCGCGCTTTCGAGCAGGTCAACAATCTGCTCTCGCAACAGGAGGCGACCGTATCCGAAGCGATCAAGACGCTGGGTTCC
AAAAACGGATGA

Upstream 100 bases:

>100_bases
CGGCCTCCATCGCATCGTTTCTTCTGGGCGGCACCTCATCCATCGGCATTTCGATGAACATCCTCGCAACCCTGCAAAAC
TTCAAGCCGGGTGGGCGCTG

Downstream 100 bases:

>100_bases
CGCCTGATCTGCCACTTACCCGCCTTGCTGCTTTTGTTCGCCAGCAAACAATAGCGCCAGAGCCGCTCACCGGTATCGGG
GGCACGGTGAGTGACGTTTC

Product: flagellar basal body rod protein FlgF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MQNNSIYVGLSSLITLERRMDAIAHNVANASTVGFRGEGTKFDTIVSDKASDDVSFATAGKSYIRTEAGPLIKTDNPLDV
AVKGDAWMSFSTPQGQVYSRDGRMKMLSTGDPVSVTGNAILDVGGAPIVLNPGGGAPRISSDGAIYQNGVQVGAIGLYTI
PADADLAYAGTSGVIPSKPAQPVVDDNSVGVVQGMIEGSNVDAMTEMTRLISISRAFEQVNNLLSQQEATVSEAIKTLGS
KNG

Sequences:

>Translated_243_residues
MQNNSIYVGLSSLITLERRMDAIAHNVANASTVGFRGEGTKFDTIVSDKASDDVSFATAGKSYIRTEAGPLIKTDNPLDV
AVKGDAWMSFSTPQGQVYSRDGRMKMLSTGDPVSVTGNAILDVGGAPIVLNPGGGAPRISSDGAIYQNGVQVGAIGLYTI
PADADLAYAGTSGVIPSKPAQPVVDDNSVGVVQGMIEGSNVDAMTEMTRLISISRAFEQVNNLLSQQEATVSEAIKTLGS
KNG
>Mature_243_residues
MQNNSIYVGLSSLITLERRMDAIAHNVANASTVGFRGEGTKFDTIVSDKASDDVSFATAGKSYIRTEAGPLIKTDNPLDV
AVKGDAWMSFSTPQGQVYSRDGRMKMLSTGDPVSVTGNAILDVGGAPIVLNPGGGAPRISSDGAIYQNGVQVGAIGLYTI
PADADLAYAGTSGVIPSKPAQPVVDDNSVGVVQGMIEGSNVDAMTEMTRLISISRAFEQVNNLLSQQEATVSEAIKTLGS
KNG

Specific function: Unknown

COG id: COG4786

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787318, Length=243, Percent_Identity=27.1604938271605, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1787317, Length=237, Percent_Identity=27.8481012658228, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 25230; Mature: 25230

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNNSIYVGLSSLITLERRMDAIAHNVANASTVGFRGEGTKFDTIVSDKASDDVSFATAG
CCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCCCCCCEEECCC
KSYIRTEAGPLIKTDNPLDVAVKGDAWMSFSTPQGQVYSRDGRMKMLSTGDPVSVTGNAI
CHHEECCCCCEEECCCCEEEEEECCEEEEECCCCCEEEECCCCEEEEECCCCEEECCCEE
LDVGGAPIVLNPGGGAPRISSDGAIYQNGVQVGAIGLYTIPADADLAYAGTSGVIPSKPA
EECCCCCEEEECCCCCCCCCCCCCEEECCEEEEEEEEEEECCCCCEEECCCCCCCCCCCC
QPVVDDNSVGVVQGMIEGSNVDAMTEMTRLISISRAFEQVNNLLSQQEATVSEAIKTLGS
CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KNG
CCC
>Mature Secondary Structure
MQNNSIYVGLSSLITLERRMDAIAHNVANASTVGFRGEGTKFDTIVSDKASDDVSFATAG
CCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCCCCCCEEECCC
KSYIRTEAGPLIKTDNPLDVAVKGDAWMSFSTPQGQVYSRDGRMKMLSTGDPVSVTGNAI
CHHEECCCCCEEECCCCEEEEEECCEEEEECCCCCEEEECCCCEEEEECCCCEEECCCEE
LDVGGAPIVLNPGGGAPRISSDGAIYQNGVQVGAIGLYTIPADADLAYAGTSGVIPSKPA
EECCCCCEEEECCCCCCCCCCCCCEEECCEEEEEEEEEEECCCCCEEECCCCCCCCCCCC
QPVVDDNSVGVVQGMIEGSNVDAMTEMTRLISISRAFEQVNNLLSQQEATVSEAIKTLGS
CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KNG
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]