Definition | Brucella melitensis ATCC 23457 chromosome chromosome II, complete sequence. |
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Accession | NC_012442 |
Length | 1,185,518 |
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The map label for this gene is yjbG [H]
Identifier: 225685947
GI number: 225685947
Start: 79825
End: 81687
Strand: Reverse
Name: yjbG [H]
Synonym: BMEA_B0085
Alternate gene names: 225685947
Gene position: 81687-79825 (Counterclockwise)
Preceding gene: 225685950
Following gene: 225685946
Centisome position: 6.89
GC content: 56.9
Gene sequence:
>1863_bases ATGAAATTTATGGTGTATCGTTTTTCGTCAGACGCAATCTTGCGCGCACCGGCAGCCGACGCCATTGCAGCGAAAAAGCA CGATCTCGGCAATCTGCCGGAATGGAACCTCGCCGATCTTTATCCTGCGCCCGACAGCCCGCAGCTTGCCAGCGACCTTG AAAAAGCAATGCAGGACAGCGTTCGTTTTGAAGAACGCTGGAAGGGCAAGCTTGCCGACGAAGCCGCAAAGCCGAATGGC GGCAATCTTGCCGAAGCCATCCGCGAATTTGAGGCGCTCAGCGAATTGATGGGGCGCATCGGCTCCTATGCGGGCCTTTA TTATTACGGCGATACAACCGATCCCAAGCGCATGAAGCTGTTCGGAGACGCACAGCAGAAGCTGACCGACGCAAGCACGC CGCTTATTTTCTTCACCCTTGAGCTTAACTGCATCGATGATACGGTTCTGGAAAAGGCAATGAACGAAAACCCCGCCATC GGCCATTACCGCCCATGGCTCACGGACCTGCGCATGGACAAGCCCTACCAGCTTGACGACAAGCTGGAACAGCTTTTCCA TGAAAAATCGATTACCGGCTATAGCGCCTGGAACCGCTTGTTCGATGAAACCATGTCCGGCCTGCGGTTTGAAATTGGCG GTGAACAACTGGCAATCGAGCCGACCCTGAACATGTTGCAGGACGCCGATGGCGCGGTGCGCAAGCAAGCCTCGGAAGCA CTGGCGAAAACCTTTACCGCAAATCTTCGCACCTTTACGCTCATCACCAATACGCTTGCCAAGGACAAGGAAATTTCCGA CCGCTGGCGCGGTTTCAAGGATATTGCCGATAGCCAGCATCTTTCCAATCGTGTGGAACGGGAAGTGGTGGATGCGCTGG CAAAGGCGGTCGAAGATGCCTATCCGCGTCTTTCGCACCGCTATTATGCGCTGAAAGCCAAGTGGCTCGGCCTTGAAAAA CTTGAAAACTGGGACCGCAACGCACCGCTGCCGGAAACCCCGCAGGCGCTGATCCCGTGGGACGAGGCGCGCGAGACCGT GCTTTCCGCCTATGGCAATTTCGCGCCCGAAATGGCCGATATCGCCAGGAAATTCTTTGACAGGAACTGGATCGACGCGC CGGTTCGCCCCGGCAAGGCGCCGGGCGCCTTCGCCCATCCGACCGTGCCGTCCGCGCATCCTTATGTGCTGCTCAACTAT ATGGGCAAGCCGCGCGATGTGATGACGCTGGCCCATGAGCTTGGCCATGGCGTGCATCAGGTGCTGGCGGGCAGCCAGGG CGCGCTGATGGCATCCACCCCGTTGACCCTCGCAGAAACCGCATCCGTCTTCGGCGAAATGCTGACCTTCCGCTTACTTC TGGAACGCACCAGAGACAAGCGCGAGCGCAAGGCCATGCTGGCACAGAAGGCCGAGGACATGATCAATACGGTCGTGCGC CAGATCGCCTTCTACCAGTTCGAGCGGCGCGTTCATACCGAGCGGCGCGCGGGCGAACTTACATCGGAACGCATTGGTGA AATCTGGATGGACGTGCAGCGCGAAAGCCTTGGCGACGCGGTGCGGCTCAATCCGGGATATGAGACCTTCTGGACCTATA TCCCGCATTTCATCCATTCGCCATTCTACGTCTATGCTTATGCTTTCGGCGATTGCCTGGTAAACTCGCTCTATGCCGTT TACCAGAACTCGGAAAAAGGCTTTCAACAGAAATATTTCGAGATGCTGAAGGCTGGTGGCACCAAGCATCACAAGGAATT GCTGGCCCCGTTTGGCCTGGATGCCTCGGACCCCGGTTTCTGGAACAAGGGACTTTCGGTGATCGAAGGCATCATCGACG AACTCGAAGCCATGGAAGACTGA
Upstream 100 bases:
>100_bases ATCGATACCGGCTCCGCAACCGAACCGAGCCGGTATATCCCTAAAGTTACAGGGCATTCTTGCGAACAGATTGCGGCAGG AGCCCTCAGGAGAATGCCCG
Downstream 100 bases:
>100_bases GCAAGAACTGTGACCCGGCCGGGGAACAAACCGCTTATTCTCTTTCGCGATGACAAGGCGGGCCGCGATGTGCTTTTCGC GGCCCCCTCAAGGATCATCC
Product: oligoendopeptidase, pepF/M3 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 620; Mature: 620
Protein sequence:
>620_residues MKFMVYRFSSDAILRAPAADAIAAKKHDLGNLPEWNLADLYPAPDSPQLASDLEKAMQDSVRFEERWKGKLADEAAKPNG GNLAEAIREFEALSELMGRIGSYAGLYYYGDTTDPKRMKLFGDAQQKLTDASTPLIFFTLELNCIDDTVLEKAMNENPAI GHYRPWLTDLRMDKPYQLDDKLEQLFHEKSITGYSAWNRLFDETMSGLRFEIGGEQLAIEPTLNMLQDADGAVRKQASEA LAKTFTANLRTFTLITNTLAKDKEISDRWRGFKDIADSQHLSNRVEREVVDALAKAVEDAYPRLSHRYYALKAKWLGLEK LENWDRNAPLPETPQALIPWDEARETVLSAYGNFAPEMADIARKFFDRNWIDAPVRPGKAPGAFAHPTVPSAHPYVLLNY MGKPRDVMTLAHELGHGVHQVLAGSQGALMASTPLTLAETASVFGEMLTFRLLLERTRDKRERKAMLAQKAEDMINTVVR QIAFYQFERRVHTERRAGELTSERIGEIWMDVQRESLGDAVRLNPGYETFWTYIPHFIHSPFYVYAYAFGDCLVNSLYAV YQNSEKGFQQKYFEMLKAGGTKHHKELLAPFGLDASDPGFWNKGLSVIEGIIDELEAMED
Sequences:
>Translated_620_residues MKFMVYRFSSDAILRAPAADAIAAKKHDLGNLPEWNLADLYPAPDSPQLASDLEKAMQDSVRFEERWKGKLADEAAKPNG GNLAEAIREFEALSELMGRIGSYAGLYYYGDTTDPKRMKLFGDAQQKLTDASTPLIFFTLELNCIDDTVLEKAMNENPAI GHYRPWLTDLRMDKPYQLDDKLEQLFHEKSITGYSAWNRLFDETMSGLRFEIGGEQLAIEPTLNMLQDADGAVRKQASEA LAKTFTANLRTFTLITNTLAKDKEISDRWRGFKDIADSQHLSNRVEREVVDALAKAVEDAYPRLSHRYYALKAKWLGLEK LENWDRNAPLPETPQALIPWDEARETVLSAYGNFAPEMADIARKFFDRNWIDAPVRPGKAPGAFAHPTVPSAHPYVLLNY MGKPRDVMTLAHELGHGVHQVLAGSQGALMASTPLTLAETASVFGEMLTFRLLLERTRDKRERKAMLAQKAEDMINTVVR QIAFYQFERRVHTERRAGELTSERIGEIWMDVQRESLGDAVRLNPGYETFWTYIPHFIHSPFYVYAYAFGDCLVNSLYAV YQNSEKGFQQKYFEMLKAGGTKHHKELLAPFGLDASDPGFWNKGLSVIEGIIDELEAMED >Mature_620_residues MKFMVYRFSSDAILRAPAADAIAAKKHDLGNLPEWNLADLYPAPDSPQLASDLEKAMQDSVRFEERWKGKLADEAAKPNG GNLAEAIREFEALSELMGRIGSYAGLYYYGDTTDPKRMKLFGDAQQKLTDASTPLIFFTLELNCIDDTVLEKAMNENPAI GHYRPWLTDLRMDKPYQLDDKLEQLFHEKSITGYSAWNRLFDETMSGLRFEIGGEQLAIEPTLNMLQDADGAVRKQASEA LAKTFTANLRTFTLITNTLAKDKEISDRWRGFKDIADSQHLSNRVEREVVDALAKAVEDAYPRLSHRYYALKAKWLGLEK LENWDRNAPLPETPQALIPWDEARETVLSAYGNFAPEMADIARKFFDRNWIDAPVRPGKAPGAFAHPTVPSAHPYVLLNY MGKPRDVMTLAHELGHGVHQVLAGSQGALMASTPLTLAETASVFGEMLTFRLLLERTRDKRERKAMLAQKAEDMINTVVR QIAFYQFERRVHTERRAGELTSERIGEIWMDVQRESLGDAVRLNPGYETFWTYIPHFIHSPFYVYAYAFGDCLVNSLYAV YQNSEKGFQQKYFEMLKAGGTKHHKELLAPFGLDASDPGFWNKGLSVIEGIIDELEAMED
Specific function: Unknown
COG id: COG1164
COG function: function code E; Oligoendopeptidase F
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M3B family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001567 - InterPro: IPR004438 - InterPro: IPR013647 [H]
Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]
EC number: NA
Molecular weight: Translated: 70279; Mature: 70279
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFMVYRFSSDAILRAPAADAIAAKKHDLGNLPEWNLADLYPAPDSPQLASDLEKAMQDS CCEEEEEECCCCEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH VRFEERWKGKLADEAAKPNGGNLAEAIREFEALSELMGRIGSYAGLYYYGDTTDPKRMKL HHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHH FGDAQQKLTDASTPLIFFTLELNCIDDTVLEKAMNENPAIGHYRPWLTDLRMDKPYQLDD HHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCHHH KLEQLFHEKSITGYSAWNRLFDETMSGLRFEIGGEQLAIEPTLNMLQDADGAVRKQASEA HHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEECCCEEEECHHHHHHHCCCHHHHHHHHHH LAKTFTANLRTFTLITNTLAKDKEISDRWRGFKDIADSQHLSNRVEREVVDALAKAVEDA HHHHHHHCCHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YPRLSHRYYALKAKWLGLEKLENWDRNAPLPETPQALIPWDEARETVLSAYGNFAPEMAD HHHHHHHHHEEHHHHCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHH IARKFFDRNWIDAPVRPGKAPGAFAHPTVPSAHPYVLLNYMGKPRDVMTLAHELGHGVHQ HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH VLAGSQGALMASTPLTLAETASVFGEMLTFRLLLERTRDKRERKAMLAQKAEDMINTVVR HHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QIAFYQFERRVHTERRAGELTSERIGEIWMDVQRESLGDAVRLNPGYETFWTYIPHFIHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCC PFYVYAYAFGDCLVNSLYAVYQNSEKGFQQKYFEMLKAGGTKHHKELLAPFGLDASDPGF CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCC WNKGLSVIEGIIDELEAMED HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKFMVYRFSSDAILRAPAADAIAAKKHDLGNLPEWNLADLYPAPDSPQLASDLEKAMQDS CCEEEEEECCCCEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH VRFEERWKGKLADEAAKPNGGNLAEAIREFEALSELMGRIGSYAGLYYYGDTTDPKRMKL HHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHH FGDAQQKLTDASTPLIFFTLELNCIDDTVLEKAMNENPAIGHYRPWLTDLRMDKPYQLDD HHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCHHH KLEQLFHEKSITGYSAWNRLFDETMSGLRFEIGGEQLAIEPTLNMLQDADGAVRKQASEA HHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEECCCEEEECHHHHHHHCCCHHHHHHHHHH LAKTFTANLRTFTLITNTLAKDKEISDRWRGFKDIADSQHLSNRVEREVVDALAKAVEDA HHHHHHHCCHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YPRLSHRYYALKAKWLGLEKLENWDRNAPLPETPQALIPWDEARETVLSAYGNFAPEMAD HHHHHHHHHEEHHHHCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHH IARKFFDRNWIDAPVRPGKAPGAFAHPTVPSAHPYVLLNYMGKPRDVMTLAHELGHGVHQ HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH VLAGSQGALMASTPLTLAETASVFGEMLTFRLLLERTRDKRERKAMLAQKAEDMINTVVR HHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QIAFYQFERRVHTERRAGELTSERIGEIWMDVQRESLGDAVRLNPGYETFWTYIPHFIHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCC PFYVYAYAFGDCLVNSLYAVYQNSEKGFQQKYFEMLKAGGTKHHKELLAPFGLDASDPGF CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCC WNKGLSVIEGIIDELEAMED HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]