Definition | Wolbachia sp. wRi, complete genome. |
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Accession | NC_012416 |
Length | 1,445,873 |
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The map label for this gene is 225630450
Identifier: 225630450
GI number: 225630450
Start: 757584
End: 759764
Strand: Reverse
Name: 225630450
Synonym: WRi_006940
Alternate gene names: NA
Gene position: 759764-757584 (Counterclockwise)
Preceding gene: 225630451
Following gene: 225630449
Centisome position: 52.55
GC content: 36.31
Gene sequence:
>2181_bases ATGAAGGCAATTTCTATAGTAATTGGAGCAACACTACAAAGCAGTTTTAATAGTACGATAGCAGGTAGTACGAAGCAGCT TTCTCGTATTGGTAGTACGATAAAACAACTTGAATCATCAAGTAAATCAGTGTCTAAGTTTAAAGAGCTTAGCCGTGATG CTCTGCTTGCTCGGCGCTCTTGGGATGAGCTAGAAATAAAGACAAAATCTCTGGCTAAACAGATAAAAAACACAGAAGCA CCAAGTAAGAAACTACAAAATGAATTTACAAGATCTAAAGCTGCAGCACTGAAAGCTAAAACAGCTTATTTACAAAAAAG AAGTGCTCTCCACTTACTACGCACGGAGTTCAGTAAAAGTGGTAGAGATATAAAATCTCTTATTGGAGATCAAGTTAAAC TTGGCTCTTCTATTGAAAAGCTTAAAAATAGCTATACAGCTTTAAATTCCGTAATGCAAAAACGTAAGGGAGTTTTAGCG CAAAGAGCAAATTTTAGAGCTCAAATCATGGATACCGTGGCACTTGGCCTCACCCTTGCAGCACCACTTAAGGCTGCAAT TAGTTTTGAGAGTGCCATGGCTGATGTAAAGAAAGTTGTAAAGTTTGAAGATACAGATGTAAATGGCTTAACAAAACTTG GGGAAACATTAAAGGAAATGTCGCGTACAATTCCGCTATCTGCGGCAGAACTTGCGCAAATTACTGCAAGTGGTGGTCAA CTTGGTATTAAAGCTAAAGATCTTACGACTTTTACAGACACTGTGGCCAAAATGGCAACTGCATTTGATATGTCAGCAGA AGAAGCAGGAGACGCTATTGCTAAACTTTCTAATATTTATCAAATTGAAATTGGTGAAATGAAAGGTATTGGTGATGCAA TAAACCATATCTCTGATAACACTGCAGCAAAAGCTAAAGACATTGTTCCTGCATTAAACAGAATCGGTGGTACAGCAAGG CAATTTGGCTTAACTGCAGTAGAAGCGGGAGCTTTAGCAAGTAGCTTCATTAGTCTTGGTAAGACCCCCGAAAAAGCAGG TACAGCAATTAATGCGATGCTCAGTAAGTTGCAAACAGCAAGTAAGCAAGGTGGCAATTTTCAAAAATCTTTTCAGCAGC TAAAAATAAATGCTAAGGAATTTGAAAAAGCAATTGGCAAGAATGCACAAGGCACATTACTTAAGTTTTTAGAAACAGTT GCAAAATTAGATAAGCAAGAACGTTCTAGCGTTCTCTTTGACCTCTTTGGTCTTGAATATCAGGATGATATAGCGCTACT TACTGGTAGTCTAGATGAATATAGAAAATCTTTGCGATTAATAAACGAAGAATATCATGGCTCAATGCAAAGAGAGTTTG AAAATAGAGCAAATACTACAGCAAATAATCTTCAGCTACTTAAGAATTCAATAGCAGAAGTAGGAATGAATCTTGGTTAT GTATTATTACCACCTTTAAATTTTACTGTTAATCTTCTGAGGTCAGCAACTACACAGGTAGCACTTTATGCCAAGGAATA TCCAGTATTGACTACAGTAATCATGAGTACTACTACAGCGTTGATTAGCATTAAAATAGCAGCTATATCTCTTGGCTATG CTTGGACTTTTGTAAAAGGTTCTTTATTCGCTCTTTTATCTACTTGGAGAATGTTTGGATCTGTTATTACTTTGGTAAAA ATAGGTCTTTATTCTACTTCTGCAGTTTTTCCAGCAATTATTGCTGGATTTAAAGCATTAACAATTGCTGTGATGAGCAA CCCTATGGGGCTGATTATTGGTGGTATTGCTGTTGCTGCAACTTTGATAATTACCAAATGGCAAGCAGTAAAGAACTTTT TTGTTACTATCTGGGAATCAGTGAAAATTGTATGGAAGTCTTTTTCTGATTGGGTAGGAAAATTTTGGAATAATATTACT CAGCCCTTTAGAACAATCAGTAATCTGTGGAATAAAAGAAATGAGTCTAAACTAGAAGTTAAGTCTGTAAATAACGTTAT AAGTGATTCTCTTAAGTACCCCATTGCGGCACACAGTAAAGCTATAGAGAATAAAACTCAAAATAATCACTTCAGTATTA ATATTCATTCAACTCCTGGGCAAGATACACGTAGCATTGCTGATGAAGTAATGGAGCGAATTAGAGAGCAATTTAGTGGC GCACTTTACGATATAAATTAA
Upstream 100 bases:
>100_bases TATCGCTTAGCTCAGTAGTTGGTGGTGGAATCAATCAGTGGCTTGATATGGATATTGAAGAGTTTTTTACGTGGTTTGAA AGTAGCAGAAAATTATACAA
Downstream 100 bases:
>100_bases ATTATGTTATCTCTTGGTCCATATAGATTTTCATTAATTGAGCAAGGCTTTACACGCAGAAGTGAATATCGCTGGCCTGC ACTTGAGCGTATTGGGGAAA
Product: tail tape measure protein
Products: NA
Alternate protein names: Phage-Related Tail Protein; Tail Tape Measure Protein; Tail Protein; Phage Tail Protein; Phage Tail Tape Measure Core Region; Phage-Related Membrane Protein; Phage Tail-Like Protein; Bacteriophage P2 Tail Protein GPT; Tail Protein Phage Assocaited; Bacteriophage Tail Protein; Fels-2 Prophage Protein; Phage Tail Tape Measure Family Protein; Phage Tail Tape Measure Protein Family; Phage Protein; Phage-Related Minor Tail Protein; Family Phage Tail Tape Measure Protein; Myosin Heavy Chain Striated; Phage Tape-Measure Protein
Number of amino acids: Translated: 726; Mature: 726
Protein sequence:
>726_residues MKAISIVIGATLQSSFNSTIAGSTKQLSRIGSTIKQLESSSKSVSKFKELSRDALLARRSWDELEIKTKSLAKQIKNTEA PSKKLQNEFTRSKAAALKAKTAYLQKRSALHLLRTEFSKSGRDIKSLIGDQVKLGSSIEKLKNSYTALNSVMQKRKGVLA QRANFRAQIMDTVALGLTLAAPLKAAISFESAMADVKKVVKFEDTDVNGLTKLGETLKEMSRTIPLSAAELAQITASGGQ LGIKAKDLTTFTDTVAKMATAFDMSAEEAGDAIAKLSNIYQIEIGEMKGIGDAINHISDNTAAKAKDIVPALNRIGGTAR QFGLTAVEAGALASSFISLGKTPEKAGTAINAMLSKLQTASKQGGNFQKSFQQLKINAKEFEKAIGKNAQGTLLKFLETV AKLDKQERSSVLFDLFGLEYQDDIALLTGSLDEYRKSLRLINEEYHGSMQREFENRANTTANNLQLLKNSIAEVGMNLGY VLLPPLNFTVNLLRSATTQVALYAKEYPVLTTVIMSTTTALISIKIAAISLGYAWTFVKGSLFALLSTWRMFGSVITLVK IGLYSTSAVFPAIIAGFKALTIAVMSNPMGLIIGGIAVAATLIITKWQAVKNFFVTIWESVKIVWKSFSDWVGKFWNNIT QPFRTISNLWNKRNESKLEVKSVNNVISDSLKYPIAAHSKAIENKTQNNHFSINIHSTPGQDTRSIADEVMERIREQFSG ALYDIN
Sequences:
>Translated_726_residues MKAISIVIGATLQSSFNSTIAGSTKQLSRIGSTIKQLESSSKSVSKFKELSRDALLARRSWDELEIKTKSLAKQIKNTEA PSKKLQNEFTRSKAAALKAKTAYLQKRSALHLLRTEFSKSGRDIKSLIGDQVKLGSSIEKLKNSYTALNSVMQKRKGVLA QRANFRAQIMDTVALGLTLAAPLKAAISFESAMADVKKVVKFEDTDVNGLTKLGETLKEMSRTIPLSAAELAQITASGGQ LGIKAKDLTTFTDTVAKMATAFDMSAEEAGDAIAKLSNIYQIEIGEMKGIGDAINHISDNTAAKAKDIVPALNRIGGTAR QFGLTAVEAGALASSFISLGKTPEKAGTAINAMLSKLQTASKQGGNFQKSFQQLKINAKEFEKAIGKNAQGTLLKFLETV AKLDKQERSSVLFDLFGLEYQDDIALLTGSLDEYRKSLRLINEEYHGSMQREFENRANTTANNLQLLKNSIAEVGMNLGY VLLPPLNFTVNLLRSATTQVALYAKEYPVLTTVIMSTTTALISIKIAAISLGYAWTFVKGSLFALLSTWRMFGSVITLVK IGLYSTSAVFPAIIAGFKALTIAVMSNPMGLIIGGIAVAATLIITKWQAVKNFFVTIWESVKIVWKSFSDWVGKFWNNIT QPFRTISNLWNKRNESKLEVKSVNNVISDSLKYPIAAHSKAIENKTQNNHFSINIHSTPGQDTRSIADEVMERIREQFSG ALYDIN >Mature_726_residues MKAISIVIGATLQSSFNSTIAGSTKQLSRIGSTIKQLESSSKSVSKFKELSRDALLARRSWDELEIKTKSLAKQIKNTEA PSKKLQNEFTRSKAAALKAKTAYLQKRSALHLLRTEFSKSGRDIKSLIGDQVKLGSSIEKLKNSYTALNSVMQKRKGVLA QRANFRAQIMDTVALGLTLAAPLKAAISFESAMADVKKVVKFEDTDVNGLTKLGETLKEMSRTIPLSAAELAQITASGGQ LGIKAKDLTTFTDTVAKMATAFDMSAEEAGDAIAKLSNIYQIEIGEMKGIGDAINHISDNTAAKAKDIVPALNRIGGTAR QFGLTAVEAGALASSFISLGKTPEKAGTAINAMLSKLQTASKQGGNFQKSFQQLKINAKEFEKAIGKNAQGTLLKFLETV AKLDKQERSSVLFDLFGLEYQDDIALLTGSLDEYRKSLRLINEEYHGSMQREFENRANTTANNLQLLKNSIAEVGMNLGY VLLPPLNFTVNLLRSATTQVALYAKEYPVLTTVIMSTTTALISIKIAAISLGYAWTFVKGSLFALLSTWRMFGSVITLVK IGLYSTSAVFPAIIAGFKALTIAVMSNPMGLIIGGIAVAATLIITKWQAVKNFFVTIWESVKIVWKSFSDWVGKFWNNIT QPFRTISNLWNKRNESKLEVKSVNNVISDSLKYPIAAHSKAIENKTQNNHFSINIHSTPGQDTRSIADEVMERIREQFSG ALYDIN
Specific function: Unknown
COG id: COG5283
COG function: function code S; Phage-related tail protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79299; Mature: 79299
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAISIVIGATLQSSFNSTIAGSTKQLSRIGSTIKQLESSSKSVSKFKELSRDALLARRS CCCEEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC WDELEIKTKSLAKQIKNTEAPSKKLQNEFTRSKAAALKAKTAYLQKRSALHLLRTEFSKS CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GRDIKSLIGDQVKLGSSIEKLKNSYTALNSVMQKRKGVLAQRANFRAQIMDTVALGLTLA CCHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH APLKAAISFESAMADVKKVVKFEDTDVNGLTKLGETLKEMSRTIPLSAAELAQITASGGQ HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC LGIKAKDLTTFTDTVAKMATAFDMSAEEAGDAIAKLSNIYQIEIGEMKGIGDAINHISDN EEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHCCCC TAAKAKDIVPALNRIGGTARQFGLTAVEAGALASSFISLGKTPEKAGTAINAMLSKLQTA HHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH SKQGGNFQKSFQQLKINAKEFEKAIGKNAQGTLLKFLETVAKLDKQERSSVLFDLFGLEY HHCCCCHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QDDIALLTGSLDEYRKSLRLINEEYHGSMQREFENRANTTANNLQLLKNSIAEVGMNLGY CCCHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCE VLLPPLNFTVNLLRSATTQVALYAKEYPVLTTVIMSTTTALISIKIAAISLGYAWTFVKG EEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHH SLFALLSTWRMFGSVITLVKIGLYSTSAVFPAIIAGFKALTIAVMSNPMGLIIGGIAVAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH TLIITKWQAVKNFFVTIWESVKIVWKSFSDWVGKFWNNITQPFRTISNLWNKRNESKLEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH KSVNNVISDSLKYPIAAHSKAIENKTQNNHFSINIHSTPGQDTRSIADEVMERIREQFSG HHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCC ALYDIN CCCCCC >Mature Secondary Structure MKAISIVIGATLQSSFNSTIAGSTKQLSRIGSTIKQLESSSKSVSKFKELSRDALLARRS CCCEEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC WDELEIKTKSLAKQIKNTEAPSKKLQNEFTRSKAAALKAKTAYLQKRSALHLLRTEFSKS CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GRDIKSLIGDQVKLGSSIEKLKNSYTALNSVMQKRKGVLAQRANFRAQIMDTVALGLTLA CCHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH APLKAAISFESAMADVKKVVKFEDTDVNGLTKLGETLKEMSRTIPLSAAELAQITASGGQ HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC LGIKAKDLTTFTDTVAKMATAFDMSAEEAGDAIAKLSNIYQIEIGEMKGIGDAINHISDN EEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHCCCC TAAKAKDIVPALNRIGGTARQFGLTAVEAGALASSFISLGKTPEKAGTAINAMLSKLQTA HHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH SKQGGNFQKSFQQLKINAKEFEKAIGKNAQGTLLKFLETVAKLDKQERSSVLFDLFGLEY HHCCCCHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QDDIALLTGSLDEYRKSLRLINEEYHGSMQREFENRANTTANNLQLLKNSIAEVGMNLGY CCCHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCE VLLPPLNFTVNLLRSATTQVALYAKEYPVLTTVIMSTTTALISIKIAAISLGYAWTFVKG EEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHH SLFALLSTWRMFGSVITLVKIGLYSTSAVFPAIIAGFKALTIAVMSNPMGLIIGGIAVAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH TLIITKWQAVKNFFVTIWESVKIVWKSFSDWVGKFWNNITQPFRTISNLWNKRNESKLEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH KSVNNVISDSLKYPIAAHSKAIENKTQNNHFSINIHSTPGQDTRSIADEVMERIREQFSG HHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCC ALYDIN CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA