Definition | Wolbachia sp. wRi, complete genome. |
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Accession | NC_012416 |
Length | 1,445,873 |
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The map label for this gene is 225630437
Identifier: 225630437
GI number: 225630437
Start: 735447
End: 736526
Strand: Reverse
Name: 225630437
Synonym: WRi_006790
Alternate gene names: NA
Gene position: 736526-735447 (Counterclockwise)
Preceding gene: 225630438
Following gene: 225630436
Centisome position: 50.94
GC content: 32.41
Gene sequence:
>1080_bases ATGAGTGAGGCAAATCCAATAGTTACATTGAAGGCTAAAATTAAAGAATTTGGTTTTAGTGAATTAAAGGCTGGTGAGAG CAATAAATCAGCAAACTCTGGTGAAACAATGTATTTCGATTTTCCAAGAATGAACTTTGTTATTAATGGAAAAATTATAG ATACAGTTTTAACCTCTGCATTAATTGAAGGAGCTCAATATCGCAAAAGCAACCTTTTTAATAGTTATGATATATACAGT AGTGAAACCGCAAGAGAAAAACAAAGAGAAATAGATACAGATTATGGTAGAGCTTTTGTTGATTCAGTCCTCAAGGATCT TGAAAAGGAACTTGCACATAATGCGTTATGTGAATTATGGAAAAGTCACTGCAAAAATTCTGAAATTCCTGATTATCAGA AAACCACCTCATATGGGAAAGATTTTGAGAGATTTTACAATGCTGGAAGAGAGCATCTGCATCTATTACTAAAAGTAGGA GATGAGAATAAGAACTATCGCCCATTTGTAAAAGAAGTCTTTAAGGAAATGTTCCAATACGCAGAAGCAAGTGTTCCGAA TGACCCTATTTTAGAAGAAATAATCACTAATTGTAACCAAGCGGGGTATGAATTTGCTGTAAGCATCCCTATTCTTGAAA GTTCACTCTTGGAATATGGATTAAAAGGGGAATATAGCAAGAATAAAACAATGTGTATTGATTGTGCTGATCCAATCAGT ACAAAAGTAAAATCTGATATGTTAGTGTTCGTAACGAAGTTTGATAACCCAGGAGAAAAAATATGCGATCTATCGACTTC ACTTGAATTTGTACTTGAGTCTCAAGATGGTGTAACCTATAAAGATGGCAAATTATTACTTACTATTCCTAAGGAACTAA AAAATTATAAAGGGGAAAGTAGAAACTTGTTTGATGTTATTAAAGAATATTTTCAAAAATTCTGCGAAAAATTAGGATTT AAATTCGAGATAAAAACACAAAAAATAGAGCATGATTTGGACGATTCGCTGAAAGTAAATAGTCATCTTGAAAGCCTAAG ACCACCTATTTGTAGTAATAATTATGCTCTTGGTCATTAA
Upstream 100 bases:
>100_bases TTTATTATACAGATAGTGTAAAGCCTTTGTTAAGCTTACATATTGTCAATAATCTATTAATAACTCTTATGGTATAATTG ACTTTGAAGAAAGAGGGAGT
Downstream 100 bases:
>100_bases GTACTTTAAACCATAAGCTCAAGTTAGAGAGAATGGCACAAATGTTATTAAACAATAAAAGTTATAGTTGTATCTGGTTA CTTAAGTTAGCTATAGAATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MSEANPIVTLKAKIKEFGFSELKAGESNKSANSGETMYFDFPRMNFVINGKIIDTVLTSALIEGAQYRKSNLFNSYDIYS SETAREKQREIDTDYGRAFVDSVLKDLEKELAHNALCELWKSHCKNSEIPDYQKTTSYGKDFERFYNAGREHLHLLLKVG DENKNYRPFVKEVFKEMFQYAEASVPNDPILEEIITNCNQAGYEFAVSIPILESSLLEYGLKGEYSKNKTMCIDCADPIS TKVKSDMLVFVTKFDNPGEKICDLSTSLEFVLESQDGVTYKDGKLLLTIPKELKNYKGESRNLFDVIKEYFQKFCEKLGF KFEIKTQKIEHDLDDSLKVNSHLESLRPPICSNNYALGH
Sequences:
>Translated_359_residues MSEANPIVTLKAKIKEFGFSELKAGESNKSANSGETMYFDFPRMNFVINGKIIDTVLTSALIEGAQYRKSNLFNSYDIYS SETAREKQREIDTDYGRAFVDSVLKDLEKELAHNALCELWKSHCKNSEIPDYQKTTSYGKDFERFYNAGREHLHLLLKVG DENKNYRPFVKEVFKEMFQYAEASVPNDPILEEIITNCNQAGYEFAVSIPILESSLLEYGLKGEYSKNKTMCIDCADPIS TKVKSDMLVFVTKFDNPGEKICDLSTSLEFVLESQDGVTYKDGKLLLTIPKELKNYKGESRNLFDVIKEYFQKFCEKLGF KFEIKTQKIEHDLDDSLKVNSHLESLRPPICSNNYALGH >Mature_358_residues SEANPIVTLKAKIKEFGFSELKAGESNKSANSGETMYFDFPRMNFVINGKIIDTVLTSALIEGAQYRKSNLFNSYDIYSS ETAREKQREIDTDYGRAFVDSVLKDLEKELAHNALCELWKSHCKNSEIPDYQKTTSYGKDFERFYNAGREHLHLLLKVGD ENKNYRPFVKEVFKEMFQYAEASVPNDPILEEIITNCNQAGYEFAVSIPILESSLLEYGLKGEYSKNKTMCIDCADPIST KVKSDMLVFVTKFDNPGEKICDLSTSLEFVLESQDGVTYKDGKLLLTIPKELKNYKGESRNLFDVIKEYFQKFCEKLGFK FEIKTQKIEHDLDDSLKVNSHLESLRPPICSNNYALGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41098; Mature: 40967
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEANPIVTLKAKIKEFGFSELKAGESNKSANSGETMYFDFPRMNFVINGKIIDTVLTSA CCCCCCEEEEEHHHHHCCHHHHHCCCCCCCCCCCCEEEEECCCEEEEECCHHHHHHHHHH LIEGAQYRKSNLFNSYDIYSSETAREKQREIDTDYGRAFVDSVLKDLEKELAHNALCELW HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KSHCKNSEIPDYQKTTSYGKDFERFYNAGREHLHLLLKVGDENKNYRPFVKEVFKEMFQY HHHCCCCCCCCHHHHHHCCHHHHHHHHCCHHHEEEEEEECCCCCCCCHHHHHHHHHHHHH AEASVPNDPILEEIITNCNQAGYEFAVSIPILESSLLEYGLKGEYSKNKTMCIDCADPIS HHCCCCCCHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHCCCCCCCCCCEEEEECCCCHH TKVKSDMLVFVTKFDNPGEKICDLSTSLEFVLESQDGVTYKDGKLLLTIPKELKNYKGES HHHCCCEEEEEEECCCCCHHHHHHHHHHHHEEECCCCCEEECCEEEEEECHHHHCCCCCC RNLFDVIKEYFQKFCEKLGFKFEIKTQKIEHDLDDSLKVNSHLESLRPPICSNNYALGH CCHHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SEANPIVTLKAKIKEFGFSELKAGESNKSANSGETMYFDFPRMNFVINGKIIDTVLTSA CCCCCEEEEEHHHHHCCHHHHHCCCCCCCCCCCCEEEEECCCEEEEECCHHHHHHHHHH LIEGAQYRKSNLFNSYDIYSSETAREKQREIDTDYGRAFVDSVLKDLEKELAHNALCELW HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KSHCKNSEIPDYQKTTSYGKDFERFYNAGREHLHLLLKVGDENKNYRPFVKEVFKEMFQY HHHCCCCCCCCHHHHHHCCHHHHHHHHCCHHHEEEEEEECCCCCCCCHHHHHHHHHHHHH AEASVPNDPILEEIITNCNQAGYEFAVSIPILESSLLEYGLKGEYSKNKTMCIDCADPIS HHCCCCCCHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHCCCCCCCCCCEEEEECCCCHH TKVKSDMLVFVTKFDNPGEKICDLSTSLEFVLESQDGVTYKDGKLLLTIPKELKNYKGES HHHCCCEEEEEEECCCCCHHHHHHHHHHHHEEECCCCCEEECCEEEEEECHHHHCCCCCC RNLFDVIKEYFQKFCEKLGFKFEIKTQKIEHDLDDSLKVNSHLESLRPPICSNNYALGH CCHHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA