Definition Wolbachia sp. wRi, complete genome.
Accession NC_012416
Length 1,445,873

Click here to switch to the map view.

The map label for this gene is 225630102

Identifier: 225630102

GI number: 225630102

Start: 295763

End: 297034

Strand: Direct

Name: 225630102

Synonym: WRi_002820

Alternate gene names: NA

Gene position: 295763-297034 (Clockwise)

Preceding gene: 225630095

Following gene: 225630104

Centisome position: 20.46

GC content: 36.32

Gene sequence:

>1272_bases
ATGCTAAGCTTAAAGAATGGTACAATACAGGTTGCCGATGATAAAATAGTGCTTGTTATAAAAAAAGATGATTATGAAGA
ATTTAAAAAGTATAAAAACGTAGATAAGAGTGGTGCTATAATTGATGACACGTTTTATGTGGGCTGTACGCTAAATGATC
AACAACTATATATTACTGGTTCTTATCCTCAAGAAGAACTAGGAGATAATACAATCATGAATGTAAAATCCGTTGGGAAA
AAGGGTGGCAAATATTTTAGTCGCCTAGAAGAAATGAAAAATCTGTTAGGCCTTAACGATAGGAAAGAGGAGATTATGGT
AAAAGCCCTATCTTGCCATCCCACAGTACAATTGTTAGAAGAGAAAAATGTTAAAACAACAGAATTGGAAGCTGCAGAAG
AGCAGTTAAAGGGGAAAAATGAAGAATTAGAAGCTGCAAAGAAGAAAGCTGAGGAGGAATTGAGAATTAAAACACAAGAA
TTACAAGATCAATTGGACACAGCTCAGCAGGAAAAACAAGACTTAGAAGCTGAAGTGGAAAAACTAAAGGCAATAGATTC
TACAGCGTTGCAGCAGCAGTTAGAAGAGAAAAATGCTAAAATAACAGAATTGGAAGCATTAGATGCTGTGGCGTTACAGC
AAAAGTTAACAGAGAAAGAGAATAAAATAACAGCATTAAAAGCTCAACCAGATGCTGCTGTTACGAAGTTAGAGGGTGAA
AAAACAACACTAACAAATAAAATAAAAGATTTAGAAGCACAGTTAAACAACCAACCAAATGCTGCTCAGTTAAAAGATAA
AGACGAGAAAATAAAAGATTTAGAGGCACAGTTAAGCAACCGACCAGATGCTGCTCAGTTAAAAGATAAAGAGGATAAGA
TAAAAGAATTAGAAGCTAAAATAAACCAACCAAATGCTGAAGTTGAAAGCCTAAAGAAAGACTTACAAGCTCGAAATGCT
CGAGTTCATCAGTTAGAGAAGGAAAATAAAGAACTAGAAGCTAAAAACAAAACAACTGAGCAACCAAAACAAGGCAATGG
AGGACGGTACACTGCTACTGTTGGTATGGGTCTTGCTGCTGGACTGATAGCATTTACTGCACTTGAACGTACAGTGAGAT
TAGATATTTGGGTAATGGTTGGTATAGCAGTAGTATCTACACTCGCAGTTGGTAGTATTACATATGCAGCATTACCTAGT
ACTCAAGTGAATGGAGCGGAAGTGCAAGGAGTAAGTGGGGGAAAAACAAGGCAGCTTAACACAGTTTGTTGA

Upstream 100 bases:

>100_bases
TTTGTTTACGAACATAAATTTTCTATGCTATGATAAAAATATTACTTGACCTTAGGTTCTAAGGGTATTATGTAATGTTA
AATTATAATTGAGGTTCGTT

Downstream 100 bases:

>100_bases
GCTGAGACGTACGTGTCAAGTAAAACACTTGACGCGAACTTCAGTTTTTGTATTCCTTCATTAACATAATATAATTTTGT
GCCGACTGCGCGATATGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MLSLKNGTIQVADDKIVLVIKKDDYEEFKKYKNVDKSGAIIDDTFYVGCTLNDQQLYITGSYPQEELGDNTIMNVKSVGK
KGGKYFSRLEEMKNLLGLNDRKEEIMVKALSCHPTVQLLEEKNVKTTELEAAEEQLKGKNEELEAAKKKAEEELRIKTQE
LQDQLDTAQQEKQDLEAEVEKLKAIDSTALQQQLEEKNAKITELEALDAVALQQKLTEKENKITALKAQPDAAVTKLEGE
KTTLTNKIKDLEAQLNNQPNAAQLKDKDEKIKDLEAQLSNRPDAAQLKDKEDKIKELEAKINQPNAEVESLKKDLQARNA
RVHQLEKENKELEAKNKTTEQPKQGNGGRYTATVGMGLAAGLIAFTALERTVRLDIWVMVGIAVVSTLAVGSITYAALPS
TQVNGAEVQGVSGGKTRQLNTVC

Sequences:

>Translated_423_residues
MLSLKNGTIQVADDKIVLVIKKDDYEEFKKYKNVDKSGAIIDDTFYVGCTLNDQQLYITGSYPQEELGDNTIMNVKSVGK
KGGKYFSRLEEMKNLLGLNDRKEEIMVKALSCHPTVQLLEEKNVKTTELEAAEEQLKGKNEELEAAKKKAEEELRIKTQE
LQDQLDTAQQEKQDLEAEVEKLKAIDSTALQQQLEEKNAKITELEALDAVALQQKLTEKENKITALKAQPDAAVTKLEGE
KTTLTNKIKDLEAQLNNQPNAAQLKDKDEKIKDLEAQLSNRPDAAQLKDKEDKIKELEAKINQPNAEVESLKKDLQARNA
RVHQLEKENKELEAKNKTTEQPKQGNGGRYTATVGMGLAAGLIAFTALERTVRLDIWVMVGIAVVSTLAVGSITYAALPS
TQVNGAEVQGVSGGKTRQLNTVC
>Mature_423_residues
MLSLKNGTIQVADDKIVLVIKKDDYEEFKKYKNVDKSGAIIDDTFYVGCTLNDQQLYITGSYPQEELGDNTIMNVKSVGK
KGGKYFSRLEEMKNLLGLNDRKEEIMVKALSCHPTVQLLEEKNVKTTELEAAEEQLKGKNEELEAAKKKAEEELRIKTQE
LQDQLDTAQQEKQDLEAEVEKLKAIDSTALQQQLEEKNAKITELEALDAVALQQKLTEKENKITALKAQPDAAVTKLEGE
KTTLTNKIKDLEAQLNNQPNAAQLKDKDEKIKDLEAQLSNRPDAAQLKDKEDKIKELEAKINQPNAEVESLKKDLQARNA
RVHQLEKENKELEAKNKTTEQPKQGNGGRYTATVGMGLAAGLIAFTALERTVRLDIWVMVGIAVVSTLAVGSITYAALPS
TQVNGAEVQGVSGGKTRQLNTVC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46950; Mature: 46950

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSLKNGTIQVADDKIVLVIKKDDYEEFKKYKNVDKSGAIIDDTFYVGCTLNDQQLYITG
CCCCCCCEEEEECCEEEEEEECCCHHHHHHHCCCCCCCCEEECCEEEEEEECCCEEEEEC
SYPQEELGDNTIMNVKSVGKKGGKYFSRLEEMKNLLGLNDRKEEIMVKALSCHPTVQLLE
CCCHHHHCCCCEEHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHH
EKNVKTTELEAAEEQLKGKNEELEAAKKKAEEELRIKTQELQDQLDTAQQEKQDLEAEVE
HCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLKAIDSTALQQQLEEKNAKITELEALDAVALQQKLTEKENKITALKAQPDAAVTKLEGE
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHEEECCC
KTTLTNKIKDLEAQLNNQPNAAQLKDKDEKIKDLEAQLSNRPDAAQLKDKEDKIKELEAK
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHH
INQPNAEVESLKKDLQARNARVHQLEKENKELEAKNKTTEQPKQGNGGRYTATVGMGLAA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHH
GLIAFTALERTVRLDIWVMVGIAVVSTLAVGSITYAALPSTQVNGAEVQGVSGGKTRQLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEHEEECCCCCCCCCEEECCCCCCCCCCC
TVC
CCC
>Mature Secondary Structure
MLSLKNGTIQVADDKIVLVIKKDDYEEFKKYKNVDKSGAIIDDTFYVGCTLNDQQLYITG
CCCCCCCEEEEECCEEEEEEECCCHHHHHHHCCCCCCCCEEECCEEEEEEECCCEEEEEC
SYPQEELGDNTIMNVKSVGKKGGKYFSRLEEMKNLLGLNDRKEEIMVKALSCHPTVQLLE
CCCHHHHCCCCEEHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHH
EKNVKTTELEAAEEQLKGKNEELEAAKKKAEEELRIKTQELQDQLDTAQQEKQDLEAEVE
HCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLKAIDSTALQQQLEEKNAKITELEALDAVALQQKLTEKENKITALKAQPDAAVTKLEGE
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHEEECCC
KTTLTNKIKDLEAQLNNQPNAAQLKDKDEKIKDLEAQLSNRPDAAQLKDKEDKIKELEAK
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHH
INQPNAEVESLKKDLQARNARVHQLEKENKELEAKNKTTEQPKQGNGGRYTATVGMGLAA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHH
GLIAFTALERTVRLDIWVMVGIAVVSTLAVGSITYAALPSTQVNGAEVQGVSGGKTRQLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEHEEECCCCCCCCCEEECCCCCCCCCCC
TVC
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA