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The map label for this gene is 225629919

Identifier: 225629919

GI number: 225629919

Start: 61355

End: 61666

Strand: Reverse

Name: 225629919

Synonym: WRi_000560

Alternate gene names: NA

Gene position: 61666-61355 (Counterclockwise)

Preceding gene: 225629920

Following gene: 225629908

Centisome position: 4.26

GC content: 32.05

Gene sequence:

>312_bases
ATGAGTAAAGAAGATATAATAAAACAATTAAAGGAAGATTGTTCTAGTCAGAATATAGATATAACAAAATCTGATTTGAG
CAAGATTCATGATGCGTTTATTAAAATAATAAAGAATGAGCTGCATGGGAAAGGTGAAATACGTTTGCATGGAATAGGAA
CATTTTCTACTGCTATCAGTCAGGAAAAACAATGTCGTAACCCCCAAAGTGGTGAGATCATGACTGTTCCTAAAAAGACA
AGGGTAAAATTTAAAGCAAGCCAAACTCTTTTAAGTATTTTAAATGAGAAGGAAAAAGCAGCAGTTAGTTAG

Upstream 100 bases:

>100_bases
AAAAATGTATGATATCCTCTATTTTTGTGATGAATTTAGTTGACTATCGGTGTCAACATAATATGCTATTTATGTGATTT
TTTCAATATTAAGGTAATTT

Downstream 100 bases:

>100_bases
ACATTGTCATTTTCATTGTTTTTACTACGCTGTGTAAGCCGTAAAATACAGCTTCGCTAATTAAATAGTGGCCTATGTTA
AGAGCTGAGATGTGAGGTAT

Product: DNA-binding protein, HU family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MSKEDIIKQLKEDCSSQNIDITKSDLSKIHDAFIKIIKNELHGKGEIRLHGIGTFSTAISQEKQCRNPQSGEIMTVPKKT
RVKFKASQTLLSILNEKEKAAVS

Sequences:

>Translated_103_residues
MSKEDIIKQLKEDCSSQNIDITKSDLSKIHDAFIKIIKNELHGKGEIRLHGIGTFSTAISQEKQCRNPQSGEIMTVPKKT
RVKFKASQTLLSILNEKEKAAVS
>Mature_102_residues
SKEDIIKQLKEDCSSQNIDITKSDLSKIHDAFIKIIKNELHGKGEIRLHGIGTFSTAISQEKQCRNPQSGEIMTVPKKTR
VKFKASQTLLSILNEKEKAAVS

Specific function: Unknown

COG id: COG0776

COG function: function code L; Bacterial nucleoid DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11524; Mature: 11393

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKEDIIKQLKEDCSSQNIDITKSDLSKIHDAFIKIIKNELHGKGEIRLHGIGTFSTAIS
CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHH
QEKQCRNPQSGEIMTVPKKTRVKFKASQTLLSILNEKEKAAVS
HHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKEDIIKQLKEDCSSQNIDITKSDLSKIHDAFIKIIKNELHGKGEIRLHGIGTFSTAIS
CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHH
QEKQCRNPQSGEIMTVPKKTRVKFKASQTLLSILNEKEKAAVS
HHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA