Definition Wolbachia sp. wRi, complete genome.
Accession NC_012416
Length 1,445,873

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The map label for this gene is 225629905

Identifier: 225629905

GI number: 225629905

Start: 45109

End: 46053

Strand: Reverse

Name: 225629905

Synonym: WRi_000360

Alternate gene names: NA

Gene position: 46053-45109 (Counterclockwise)

Preceding gene: 225629906

Following gene: 225629904

Centisome position: 3.19

GC content: 36.72

Gene sequence:

>945_bases
ATGGTAGCAAGTTATAGTGTTTTAAAAAGGTATGCGTTAGCCTATATAAAGAAATCTGGTAGTAACAGTGATGTTAAAGA
GTTTTTACAATTTTGTAATACGCAAAATACCACAAATTGGAGTGAGGAGAATTTTAAAAATGCGTATGAAAAATTTACAC
ATCCAAATTCAAGCAATAGGCACGATACAGGAAGCAGAAATGATCAATATAACGCAGGGAATAACGCACAACCTACAGGC
TCTCAGATTACACATATACATGTACACAATAGAGGTTTAGACTTTTGGGATTATTTGCTATTACAATGCTGGATGGATTC
TTTATTCGGTGGACGTGGTCACACTACGGTTAATAATATAACGAATATTAACAATGGTAATACCACTCATCAAGGGAGAA
AAGAGAATAAAAAAGAATCAGAAGACAGTAGAAAGCTATTAGCTTTGGGTATAGTAGCTGCAGTTGTGTGTGTTGCTTTC
CATGCTGGTATGTGTTTTTGGTATAACAGCAGCAGAAAAGTGGCTAGAAAAAAAGAAAAAATAGATTACCTGGATAGTAA
ATTTAAAACGTTCAGAAATATAGAATTTGCGGTTGGCGTTGTTTCTTTGGCAGCTTTGGTAGCTTGTGCTGTTTACCCAG
TCTTACCAGTGTGGGGTTTAGCTATCCTTGGCGTTAATTCTCTCGTATGTTTTGCTGGTGGTTTAGCTTTTCATATGAAG
CATGAGGAAGAATCAGAAAATATCGAGAAAGCTAAAGGAGCGGTAGATAGCTGTCTTAGACAAGGGCATGGTTATGGAGA
TTCTTCTCGTTATGATGCACCACCTCCTTACTTTTCTCAAGATCCTAATACTACTCCAACTGCTCCTCCTCAAAATGCAT
TTGATAATCCTTATTTGCAACAGAAGTTTGGGAATTGTAAGGGGTTCACGCGTGATAAAAATTAA

Upstream 100 bases:

>100_bases
CACTCTGAACGGATACTTGAATCAGGCTCAAGTTGACAAGTAGATGTTATCTTGTTATAATAAATATTTATTAATTTAAT
CTTAACTTAAGAGGGTATTT

Downstream 100 bases:

>100_bases
CAGTTTTATTTTTAGCCAAATTAATTGAATCAAGCTACAAAACCTGCTAAAGTTAACTTTGTGAAAGCACCCTTAGCTCA
GTTGGATTAGAGCATTTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MVASYSVLKRYALAYIKKSGSNSDVKEFLQFCNTQNTTNWSEENFKNAYEKFTHPNSSNRHDTGSRNDQYNAGNNAQPTG
SQITHIHVHNRGLDFWDYLLLQCWMDSLFGGRGHTTVNNITNINNGNTTHQGRKENKKESEDSRKLLALGIVAAVVCVAF
HAGMCFWYNSSRKVARKKEKIDYLDSKFKTFRNIEFAVGVVSLAALVACAVYPVLPVWGLAILGVNSLVCFAGGLAFHMK
HEEESENIEKAKGAVDSCLRQGHGYGDSSRYDAPPPYFSQDPNTTPTAPPQNAFDNPYLQQKFGNCKGFTRDKN

Sequences:

>Translated_314_residues
MVASYSVLKRYALAYIKKSGSNSDVKEFLQFCNTQNTTNWSEENFKNAYEKFTHPNSSNRHDTGSRNDQYNAGNNAQPTG
SQITHIHVHNRGLDFWDYLLLQCWMDSLFGGRGHTTVNNITNINNGNTTHQGRKENKKESEDSRKLLALGIVAAVVCVAF
HAGMCFWYNSSRKVARKKEKIDYLDSKFKTFRNIEFAVGVVSLAALVACAVYPVLPVWGLAILGVNSLVCFAGGLAFHMK
HEEESENIEKAKGAVDSCLRQGHGYGDSSRYDAPPPYFSQDPNTTPTAPPQNAFDNPYLQQKFGNCKGFTRDKN
>Mature_314_residues
MVASYSVLKRYALAYIKKSGSNSDVKEFLQFCNTQNTTNWSEENFKNAYEKFTHPNSSNRHDTGSRNDQYNAGNNAQPTG
SQITHIHVHNRGLDFWDYLLLQCWMDSLFGGRGHTTVNNITNINNGNTTHQGRKENKKESEDSRKLLALGIVAAVVCVAF
HAGMCFWYNSSRKVARKKEKIDYLDSKFKTFRNIEFAVGVVSLAALVACAVYPVLPVWGLAILGVNSLVCFAGGLAFHMK
HEEESENIEKAKGAVDSCLRQGHGYGDSSRYDAPPPYFSQDPNTTPTAPPQNAFDNPYLQQKFGNCKGFTRDKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35129; Mature: 35129

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVASYSVLKRYALAYIKKSGSNSDVKEFLQFCNTQNTTNWSEENFKNAYEKFTHPNSSNR
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCC
HDTGSRNDQYNAGNNAQPTGSQITHIHVHNRGLDFWDYLLLQCWMDSLFGGRGHTTVNNI
CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHCC
TNINNGNTTHQGRKENKKESEDSRKLLALGIVAAVVCVAFHAGMCFWYNSSRKVARKKEK
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEECCCHHHHHHHHH
IDYLDSKFKTFRNIEFAVGVVSLAALVACAVYPVLPVWGLAILGVNSLVCFAGGLAFHMK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEC
HEEESENIEKAKGAVDSCLRQGHGYGDSSRYDAPPPYFSQDPNTTPTAPPQNAFDNPYLQ
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
QKFGNCKGFTRDKN
HHCCCCCCCCCCCC
>Mature Secondary Structure
MVASYSVLKRYALAYIKKSGSNSDVKEFLQFCNTQNTTNWSEENFKNAYEKFTHPNSSNR
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCC
HDTGSRNDQYNAGNNAQPTGSQITHIHVHNRGLDFWDYLLLQCWMDSLFGGRGHTTVNNI
CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHCC
TNINNGNTTHQGRKENKKESEDSRKLLALGIVAAVVCVAFHAGMCFWYNSSRKVARKKEK
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEECCCHHHHHHHHH
IDYLDSKFKTFRNIEFAVGVVSLAALVACAVYPVLPVWGLAILGVNSLVCFAGGLAFHMK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEC
HEEESENIEKAKGAVDSCLRQGHGYGDSSRYDAPPPYFSQDPNTTPTAPPQNAFDNPYLQ
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
QKFGNCKGFTRDKN
HHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA