| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527431
Identifier: 222527431
GI number: 222527431
Start: 5228620
End: 5231175
Strand: Direct
Name: 222527431
Synonym: Chy400_4222
Alternate gene names: NA
Gene position: 5228620-5231175 (Clockwise)
Preceding gene: 222527430
Following gene: 222527432
Centisome position: 99.23
GC content: 55.16
Gene sequence:
>2556_bases ATGGTGAAGAGAACACACACGTATCGCCCGCTCAAACGGGTGCGCGGGCAGAGCATCCCGCTCCTGGCCCTGATGATCGT CGTCTTAATCGGAATGGTTGCGCTGTCGGTTGACGTCGGGCGCACCTTCTCTGAGGAGCGACGCGCTGTAGCCGCAGCTA ACGCTGCTTCGCTGTCGGCGATGAATACCTATATTCGCCGACCGGCCGGGACAACCAATACGGTTATCTACGACTCGATT GTCAATTCGCTCCGCTCAAACGGGATCGATCTGGCCAACAACCCGAATATTCGGATGGAGGCCTACTATTTGAATGCCCG TGGCGAACCGATTGAGGGTGGTGCCCAAATCACCCGCGATGGTACGGTAGCCCCGGACAATGTGGCCTATATTCAGGTCA ATCTGGAGGGTGAAGTAGATACCTTCTTCGCCCGGGTTGTCAATCAAAACCAGTTGCCGATTGCCGCAACCGCCTACGCC GGCACCTGTCCGCCCACAGATGGCGTGTATCCGATTGCCATTGATAACGACTACATCAGTGGCAATGAATTCCGCAACCC GGGCGATCAGAATGGTGATGGGAAGATTGATAACAACTGGCAAAAGCTCACCAGCGGCACGTACAAGGGCTATACCACGA TGCGGCTCTACCTGACCGAAAACAACGTGCCTGGTGGCTTCGGCTGGCTGCGCTGGCTCAATGGCCGAGGAGCGAGTGGT GCCAATGCTAACAGCGCCCAGGAGCTGGAGCTGGCATTGAGCGGTACCGGTTCGCTCTCAAAAGGGTTTATGGAAGTTAC ACCCTGGCCGGCCCCGAATTTACCCCAACCCACCGGCTATCCTGAACAGCCCGGTCAACTGAATGTCGGCGACTGGGTCT ATGGCAGCTCTGGCTTCACTGCCAGCAATGATCGGCGGGCTGCACTCGATGCGCACATCAGCAACGGTACGCGCATGATC CTGCCAATCTACGACGTTGCCGTTGGCCAGGGATCGAATGCAGCCTATCGTGTTGTCCGCTTTGGCCTCTTTGTTATGAC AGCATATGGACGTGAGCGTAACCGCCCCTACATGGATTTTATCTTCCTCGGTGATCCTGATCGGCAGGGTACGGCTTGTT CGGCTACACCACCGCCCCCTGAAGATACCAGCATCGTACGTCTGACCGGTAGTGTTGAGCTGTGGCCGGAGTATCAAATC GTGGCTAATGATCGCCCGCCGGTTCAGTATGTAGTTATCCTCGACGCAACCGGCTCGATGAGCATGAACTTCAATGGTCA AGGTAAGCTCAATGGGCAAACCCGCCAGTGCATTACCGGCCCGCCCGGGTGGCCGTTTCCGGATGACCCCAGTTGTGATG GTTCACCAAACTTTGCCTGGACTCCGCGCGAAGAGCGCCGTATCTATGTTGCGAAAGAGGCGGTTCGGCTCTTGATCAAA CAAACCAATATGCCCGGAAATCCGGGATACGATCCCACTCGCCCAATCGATCAAATGGCCATCGTTTGGTTTAACCAGGA TGTACCGGAAAGCCGGATTATGCTGGGTGGTTTCAGTTCTGATCCGGCCGCGCTTGATCGAGCCGTGTTAGATGCCGGTA AAGTCAACAACGATCCATATCTGTCACAAGGTGGTACCAATACGGCTGGTGCATTCTACCGGGTTGGTCAACTGCTCGGA CGCGCACCGACAGGAACGACACAACTCGGACGAGAGTGGACCTATCGACGGGCAATCATTCTGGTTACCGATGGTTTGGC CAATATCTTCCTCAATACGAGCAATGGTAACCTGAATGGTGGTCAGAGTGGCATGACTACTTACCCGACCGGTCACCCGT GCCGCTATTCTGGTGTAGCTGATGACGCTCCGTGTCAAACTACCGAGATCGGTGGTAAATACCAGGGCCGTGATCGACCA ATTACTCAGATGGTACAGGAAGCCACGAAGATTAAGTCTAATCAGGCTGTACAGACCGATATCTACGTACTGGCGATTTC AACTGTACCAACAGTTGGTCTGAAAGATGGCGTTGCCTCAACACCCCGTCACTTCTATATGGCATCGAGCCTTGAACGAG ACTCAGAAGGCTTGACCAATGTAGATCGGATGATGCTGGCTATCAACGCCGAGGTTGAAGGTGCACCTTGTATCAGCGGC AGTGATGGTGAATGGCGCGGAACTATTCCCGGCAATCACTTCCAGTCGGTTGGTGGTTTGCGCTATCCGAACGTGGGTGA GGTCATTCTCGAAGACTTCTCGACCGGAAGTGTTTATCGGACACCAATTGTGGCTGGTACCGATGGTCGGGTGCGCTACA CCTTCGAGGAGATTCCACGCGGTACCTACCGCTTGCAGGCCTATCTCTTCTACCGCCACCCGCTCGACCCGCCCACGGCG ATGCCACGGATGTATAGCCAGCTCTTCAACGGCAGTTCGAGCCAGTCTGATATGGTAGTTGTGCTTGAACCAAGTGGGCA GGGGGCCGGCTTCATCTCGACAATTGAGCAGAATCTGCGCCTGCGCCTTGACGGGAATGTATGTAGTGTAAACTAG
Upstream 100 bases:
>100_bases TGCCTATTCGTAGTCAATTTGTCGGCTGACAGACGACAGCCCGCCACCGTTTAAGTCACGCTCCTACACTATGGTGTCAA CGCAGCAACTGGAGGAAAGT
Downstream 100 bases:
>100_bases GTAGGTAGGGTTGTGCCGCAGAGATGCCATGGTGCGTCTCTGCGGCTTTTGTGTATCATTACGTCATTTCCCCATCAACT GCGCTATCAGGTTCACACTG
Product: von Willebrand factor type A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 851; Mature: 851
Protein sequence:
>851_residues MVKRTHTYRPLKRVRGQSIPLLALMIVVLIGMVALSVDVGRTFSEERRAVAAANAASLSAMNTYIRRPAGTTNTVIYDSI VNSLRSNGIDLANNPNIRMEAYYLNARGEPIEGGAQITRDGTVAPDNVAYIQVNLEGEVDTFFARVVNQNQLPIAATAYA GTCPPTDGVYPIAIDNDYISGNEFRNPGDQNGDGKIDNNWQKLTSGTYKGYTTMRLYLTENNVPGGFGWLRWLNGRGASG ANANSAQELELALSGTGSLSKGFMEVTPWPAPNLPQPTGYPEQPGQLNVGDWVYGSSGFTASNDRRAALDAHISNGTRMI LPIYDVAVGQGSNAAYRVVRFGLFVMTAYGRERNRPYMDFIFLGDPDRQGTACSATPPPPEDTSIVRLTGSVELWPEYQI VANDRPPVQYVVILDATGSMSMNFNGQGKLNGQTRQCITGPPGWPFPDDPSCDGSPNFAWTPREERRIYVAKEAVRLLIK QTNMPGNPGYDPTRPIDQMAIVWFNQDVPESRIMLGGFSSDPAALDRAVLDAGKVNNDPYLSQGGTNTAGAFYRVGQLLG RAPTGTTQLGREWTYRRAIILVTDGLANIFLNTSNGNLNGGQSGMTTYPTGHPCRYSGVADDAPCQTTEIGGKYQGRDRP ITQMVQEATKIKSNQAVQTDIYVLAISTVPTVGLKDGVASTPRHFYMASSLERDSEGLTNVDRMMLAINAEVEGAPCISG SDGEWRGTIPGNHFQSVGGLRYPNVGEVILEDFSTGSVYRTPIVAGTDGRVRYTFEEIPRGTYRLQAYLFYRHPLDPPTA MPRMYSQLFNGSSSQSDMVVVLEPSGQGAGFISTIEQNLRLRLDGNVCSVN
Sequences:
>Translated_851_residues MVKRTHTYRPLKRVRGQSIPLLALMIVVLIGMVALSVDVGRTFSEERRAVAAANAASLSAMNTYIRRPAGTTNTVIYDSI VNSLRSNGIDLANNPNIRMEAYYLNARGEPIEGGAQITRDGTVAPDNVAYIQVNLEGEVDTFFARVVNQNQLPIAATAYA GTCPPTDGVYPIAIDNDYISGNEFRNPGDQNGDGKIDNNWQKLTSGTYKGYTTMRLYLTENNVPGGFGWLRWLNGRGASG ANANSAQELELALSGTGSLSKGFMEVTPWPAPNLPQPTGYPEQPGQLNVGDWVYGSSGFTASNDRRAALDAHISNGTRMI LPIYDVAVGQGSNAAYRVVRFGLFVMTAYGRERNRPYMDFIFLGDPDRQGTACSATPPPPEDTSIVRLTGSVELWPEYQI VANDRPPVQYVVILDATGSMSMNFNGQGKLNGQTRQCITGPPGWPFPDDPSCDGSPNFAWTPREERRIYVAKEAVRLLIK QTNMPGNPGYDPTRPIDQMAIVWFNQDVPESRIMLGGFSSDPAALDRAVLDAGKVNNDPYLSQGGTNTAGAFYRVGQLLG RAPTGTTQLGREWTYRRAIILVTDGLANIFLNTSNGNLNGGQSGMTTYPTGHPCRYSGVADDAPCQTTEIGGKYQGRDRP ITQMVQEATKIKSNQAVQTDIYVLAISTVPTVGLKDGVASTPRHFYMASSLERDSEGLTNVDRMMLAINAEVEGAPCISG SDGEWRGTIPGNHFQSVGGLRYPNVGEVILEDFSTGSVYRTPIVAGTDGRVRYTFEEIPRGTYRLQAYLFYRHPLDPPTA MPRMYSQLFNGSSSQSDMVVVLEPSGQGAGFISTIEQNLRLRLDGNVCSVN >Mature_851_residues MVKRTHTYRPLKRVRGQSIPLLALMIVVLIGMVALSVDVGRTFSEERRAVAAANAASLSAMNTYIRRPAGTTNTVIYDSI VNSLRSNGIDLANNPNIRMEAYYLNARGEPIEGGAQITRDGTVAPDNVAYIQVNLEGEVDTFFARVVNQNQLPIAATAYA GTCPPTDGVYPIAIDNDYISGNEFRNPGDQNGDGKIDNNWQKLTSGTYKGYTTMRLYLTENNVPGGFGWLRWLNGRGASG ANANSAQELELALSGTGSLSKGFMEVTPWPAPNLPQPTGYPEQPGQLNVGDWVYGSSGFTASNDRRAALDAHISNGTRMI LPIYDVAVGQGSNAAYRVVRFGLFVMTAYGRERNRPYMDFIFLGDPDRQGTACSATPPPPEDTSIVRLTGSVELWPEYQI VANDRPPVQYVVILDATGSMSMNFNGQGKLNGQTRQCITGPPGWPFPDDPSCDGSPNFAWTPREERRIYVAKEAVRLLIK QTNMPGNPGYDPTRPIDQMAIVWFNQDVPESRIMLGGFSSDPAALDRAVLDAGKVNNDPYLSQGGTNTAGAFYRVGQLLG RAPTGTTQLGREWTYRRAIILVTDGLANIFLNTSNGNLNGGQSGMTTYPTGHPCRYSGVADDAPCQTTEIGGKYQGRDRP ITQMVQEATKIKSNQAVQTDIYVLAISTVPTVGLKDGVASTPRHFYMASSLERDSEGLTNVDRMMLAINAEVEGAPCISG SDGEWRGTIPGNHFQSVGGLRYPNVGEVILEDFSTGSVYRTPIVAGTDGRVRYTFEEIPRGTYRLQAYLFYRHPLDPPTA MPRMYSQLFNGSSSQSDMVVVLEPSGQGAGFISTIEQNLRLRLDGNVCSVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92556; Mature: 92556
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: PS50234 VWFA ; PS00037 MYB_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKRTHTYRPLKRVRGQSIPLLALMIVVLIGMVALSVDVGRTFSEERRAVAAANAASLSA CCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHH MNTYIRRPAGTTNTVIYDSIVNSLRSNGIDLANNPNIRMEAYYLNARGEPIEGGAQITRD HHHHHHCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEC GTVAPDNVAYIQVNLEGEVDTFFARVVNQNQLPIAATAYAGTCPPTDGVYPIAIDNDYIS CCCCCCCEEEEEEEECCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEECCCEEC GNEFRNPGDQNGDGKIDNNWQKLTSGTYKGYTTMRLYLTENNVPGGFGWLRWLNGRGASG CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEEEECCCCCCCCHHHHEECCCCCCC ANANSAQELELALSGTGSLSKGFMEVTPWPAPNLPQPTGYPEQPGQLNVGDWVYGSSGFT CCCCCCEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEECCCCEEECCCCCC ASNDRRAALDAHISNGTRMILPIYDVAVGQGSNAAYRVVRFGLFVMTAYGRERNRPYMDF CCCCCCEEEEEEECCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHEECCCCCCCCEEEE IFLGDPDRQGTACSATPPPPEDTSIVRLTGSVELWPEYQIVANDRPPVQYVVILDATGSM EEECCCCCCCCCCCCCCCCCCCCEEEEEECCEEECCCEEEEECCCCCEEEEEEEECCCCE SMNFNGQGKLNGQTRQCITGPPGWPFPDDPSCDGSPNFAWTPREERRIYVAKEAVRLLIK EEECCCCEEECCCCCEEEECCCCCCCCCCCCCCCCCCEEECCCHHCEEEEHHHHHHHHHH QTNMPGNPGYDPTRPIDQMAIVWFNQDVPESRIMLGGFSSDPAALDRAVLDAGKVNNDPY HCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCC LSQGGTNTAGAFYRVGQLLGRAPTGTTQLGREWTYRRAIILVTDGLANIFLNTSNGNLNG CCCCCCCCHHHHHHHHHHHCCCCCCCHHHCCCEEEEEEEEEEECCCEEEEEECCCCCCCC GQSGMTTYPTGHPCRYSGVADDAPCQTTEIGGKYQGRDRPITQMVQEATKIKSNQAVQTD CCCCCEECCCCCCEEECCCCCCCCCCEECCCCEECCCCCHHHHHHHHHHHHCCCCCEEEE IYVLAISTVPTVGLKDGVASTPRHFYMASSLERDSEGLTNVDRMMLAINAEVEGAPCISG EEEEEEECCCCCCCCCCCCCCCCCEEEHHHCCCCCCCCCCCCEEEEEEECCCCCCCEECC SDGEWRGTIPGNHFQSVGGLRYPNVGEVILEDFSTGSVYRTPIVAGTDGRVRYTFEEIPR CCCCEEECCCCCHHHHCCCCCCCCHHHHHHHCCCCCCEEECEEEECCCCEEEEEHHHCCC GTYRLQAYLFYRHPLDPPTAMPRMYSQLFNGSSSQSDMVVVLEPSGQGAGFISTIEQNLR CEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHCCCEE LRLDGNVCSVN EEECCCEEECC >Mature Secondary Structure MVKRTHTYRPLKRVRGQSIPLLALMIVVLIGMVALSVDVGRTFSEERRAVAAANAASLSA CCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHH MNTYIRRPAGTTNTVIYDSIVNSLRSNGIDLANNPNIRMEAYYLNARGEPIEGGAQITRD HHHHHHCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEC GTVAPDNVAYIQVNLEGEVDTFFARVVNQNQLPIAATAYAGTCPPTDGVYPIAIDNDYIS CCCCCCCEEEEEEEECCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEECCCEEC GNEFRNPGDQNGDGKIDNNWQKLTSGTYKGYTTMRLYLTENNVPGGFGWLRWLNGRGASG CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEEEECCCCCCCCHHHHEECCCCCCC ANANSAQELELALSGTGSLSKGFMEVTPWPAPNLPQPTGYPEQPGQLNVGDWVYGSSGFT CCCCCCEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEECCCCEEECCCCCC ASNDRRAALDAHISNGTRMILPIYDVAVGQGSNAAYRVVRFGLFVMTAYGRERNRPYMDF CCCCCCEEEEEEECCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHEECCCCCCCCEEEE IFLGDPDRQGTACSATPPPPEDTSIVRLTGSVELWPEYQIVANDRPPVQYVVILDATGSM EEECCCCCCCCCCCCCCCCCCCCEEEEEECCEEECCCEEEEECCCCCEEEEEEEECCCCE SMNFNGQGKLNGQTRQCITGPPGWPFPDDPSCDGSPNFAWTPREERRIYVAKEAVRLLIK EEECCCCEEECCCCCEEEECCCCCCCCCCCCCCCCCCEEECCCHHCEEEEHHHHHHHHHH QTNMPGNPGYDPTRPIDQMAIVWFNQDVPESRIMLGGFSSDPAALDRAVLDAGKVNNDPY HCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCC LSQGGTNTAGAFYRVGQLLGRAPTGTTQLGREWTYRRAIILVTDGLANIFLNTSNGNLNG CCCCCCCCHHHHHHHHHHHCCCCCCCHHHCCCEEEEEEEEEEECCCEEEEEECCCCCCCC GQSGMTTYPTGHPCRYSGVADDAPCQTTEIGGKYQGRDRPITQMVQEATKIKSNQAVQTD CCCCCEECCCCCCEEECCCCCCCCCCEECCCCEECCCCCHHHHHHHHHHHHCCCCCEEEE IYVLAISTVPTVGLKDGVASTPRHFYMASSLERDSEGLTNVDRMMLAINAEVEGAPCISG EEEEEEECCCCCCCCCCCCCCCCCEEEHHHCCCCCCCCCCCCEEEEEEECCCCCCCEECC SDGEWRGTIPGNHFQSVGGLRYPNVGEVILEDFSTGSVYRTPIVAGTDGRVRYTFEEIPR CCCCEEECCCCCHHHHCCCCCCCCHHHHHHHCCCCCCEEECEEEECCCCEEEEEHHHCCC GTYRLQAYLFYRHPLDPPTAMPRMYSQLFNGSSSQSDMVVVLEPSGQGAGFISTIEQNLR CEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHCCCEE LRLDGNVCSVN EEECCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA