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The map label for this gene is ywfA [H]

Identifier: 222527427

GI number: 222527427

Start: 5225034

End: 5226224

Strand: Reverse

Name: ywfA [H]

Synonym: Chy400_4218

Alternate gene names: 222527427

Gene position: 5226224-5225034 (Counterclockwise)

Preceding gene: 222527435

Following gene: 222527426

Centisome position: 99.19

GC content: 54.24

Gene sequence:

>1191_bases
ATGATAACAGGCACCACAACGAATTTGCAGACACTATCGTGGTTCCACGTGGCAATGCTGGTTTGGATGCGCTGGCTGAT
CAGTCTGGTCTTTCGTCTGGTCTATCCATTGCTGACGTTTCTTGCTGCCAGTTTTGCCGTGGATTTGAGTACAGCCAGTC
TGCTGATAACCGTCCAGGTTGCCGCATCACTGCTGAGTCCGTTGGGTGGGGTGTTGAGTGATCGGTTTGGTGATCGGATT
GTGATCCTCTGGGGCGGGATTATCTTTGTGTTGGGGGTTGCAGTTTGTGGGGTGAGTAGTAGTTTTGGGCTATTCCTGTC
CGGGTATGCGCTTGTCGGTCTGGCGGTGGCGATTGCGATGCCGGCATTGCAGAGCTATGTAAGCGCTCGCAGTCACTATT
CTCAACGGGCACGTTTGCTGGGAGTGCTGGAACTGAGCTGGGCGCTCTCGGCGTTGCTCGGTATACCACTGGTAACCTGG
GTAGCAGAACAGTTTGGCCTGGCAATGGTTTTTGCCGGTCTGACGGTTGTTGGTATTGCCACGGTTGCCTTGATGACAAT
GCTACCAAACGATGAACGCATTCACTACACACAGTTCGGTGGCGATACATCTGCCGGGGTCAATCCAATCCAGATCGTGC
TCAAACCGGTTATCCTGGCCGCGCTGAGTTTTATCTTTGTGCAGATGGCAGCCGTTGAGTTGATTTTTGTCAGCTACGCG
GGCTGGTTAGAGTACACATTTGGGGCTACCACGACAGAATTGGGTCTCGTCTTCGGATTGTTAGGGGTCGTTGAACTGAT
CGGTTCACTGGCAGCAACCCTCTTCACCGACCGCATCGGTAAGCGCCGGGCAGTACTTGGTGGGTTTGCGCTGGTAGGTG
TCTGGTTGCTTTTGTTGCCGCAGAGTACGTCCTGGCTCACGTTTCTGATTTTGCTGCTGGCGTTTGATTTATGTTTTGAG
TTTGCCATCGTCTCGACCTTCCCCTTGATCAGTGGTCTCAGTGCGCAGGGCCGTGGCACAGTACTCGCGGCAATGACGGC
CAGTATCGGCGGTGGACGGATTCTCGGTTCGCTTGTAGCCCCGTGGTTGAGCGTGACTGCCGGTTATGCGGTGAATAGCA
CGTTAGCCGGAATCCTGGTGCTGTGCGGGGTAGGCTTTGGTATCATAGCTATGAGAGAAGGCCGTGCCTGA

Upstream 100 bases:

>100_bases
TGGCGTTGCATACGTATAAGGTTGTTGTCTAAACAGCGATTACGGTAGCTAAAATGATAGCCTGCTGTGAACTGACTGTC
AATGAAAGAGTATCACGGGT

Downstream 100 bases:

>100_bases
GACCGGCAATGTAACTAAACGCACCGGCCTTGCATCTTATTGGTAGTGATGCGAATTATTGTGAAAGGAACAACACATGG
CTCTTATGCAGGAAAAAGAT

Product: major facilitator superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MITGTTTNLQTLSWFHVAMLVWMRWLISLVFRLVYPLLTFLAASFAVDLSTASLLITVQVAASLLSPLGGVLSDRFGDRI
VILWGGIIFVLGVAVCGVSSSFGLFLSGYALVGLAVAIAMPALQSYVSARSHYSQRARLLGVLELSWALSALLGIPLVTW
VAEQFGLAMVFAGLTVVGIATVALMTMLPNDERIHYTQFGGDTSAGVNPIQIVLKPVILAALSFIFVQMAAVELIFVSYA
GWLEYTFGATTTELGLVFGLLGVVELIGSLAATLFTDRIGKRRAVLGGFALVGVWLLLLPQSTSWLTFLILLLAFDLCFE
FAIVSTFPLISGLSAQGRGTVLAAMTASIGGGRILGSLVAPWLSVTAGYAVNSTLAGILVLCGVGFGIIAMREGRA

Sequences:

>Translated_396_residues
MITGTTTNLQTLSWFHVAMLVWMRWLISLVFRLVYPLLTFLAASFAVDLSTASLLITVQVAASLLSPLGGVLSDRFGDRI
VILWGGIIFVLGVAVCGVSSSFGLFLSGYALVGLAVAIAMPALQSYVSARSHYSQRARLLGVLELSWALSALLGIPLVTW
VAEQFGLAMVFAGLTVVGIATVALMTMLPNDERIHYTQFGGDTSAGVNPIQIVLKPVILAALSFIFVQMAAVELIFVSYA
GWLEYTFGATTTELGLVFGLLGVVELIGSLAATLFTDRIGKRRAVLGGFALVGVWLLLLPQSTSWLTFLILLLAFDLCFE
FAIVSTFPLISGLSAQGRGTVLAAMTASIGGGRILGSLVAPWLSVTAGYAVNSTLAGILVLCGVGFGIIAMREGRA
>Mature_396_residues
MITGTTTNLQTLSWFHVAMLVWMRWLISLVFRLVYPLLTFLAASFAVDLSTASLLITVQVAASLLSPLGGVLSDRFGDRI
VILWGGIIFVLGVAVCGVSSSFGLFLSGYALVGLAVAIAMPALQSYVSARSHYSQRARLLGVLELSWALSALLGIPLVTW
VAEQFGLAMVFAGLTVVGIATVALMTMLPNDERIHYTQFGGDTSAGVNPIQIVLKPVILAALSFIFVQMAAVELIFVSYA
GWLEYTFGATTTELGLVFGLLGVVELIGSLAATLFTDRIGKRRAVLGGFALVGVWLLLLPQSTSWLTFLILLLAFDLCFE
FAIVSTFPLISGLSAQGRGTVLAAMTASIGGGRILGSLVAPWLSVTAGYAVNSTLAGILVLCGVGFGIIAMREGRA

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41851; Mature: 41851

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHCCHHHHHHHHHHHHHHHCCHHHEEECCCCC
>Mature Secondary Structure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HHHHHHCCHHHHHHHHHHHHHHHCCHHHEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]