| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is 222527420
Identifier: 222527420
GI number: 222527420
Start: 5218455
End: 5219645
Strand: Reverse
Name: 222527420
Synonym: Chy400_4211
Alternate gene names: NA
Gene position: 5219645-5218455 (Counterclockwise)
Preceding gene: 222527421
Following gene: 222527418
Centisome position: 99.06
GC content: 54.41
Gene sequence:
>1191_bases ATGGCCAAGAGCCACTATCAGGTTGTTATTGCCGGTGGTGGTACCGGCGGTCTCACCGTTGCGGCCCAATTGATGGATCA ACCGAATCCGCCAGAGGTGGCGCTGATCGAACCGTCAACGGTCCATTACTATCAGCCATTGTGGACGCTGGTTGGTGGTG GTGTGTTTCCCCGCGAGCAATCGGCACGACCGGAAGCCGATTATATTCCACCCGGCGTGACATGGATCAAGGAAGCAGTC AAGGCTTTTGACCCTGATGCGAATAGTTTGACCCTGAGCAACGGTGAGACTATCACCTACGACTATCTGGTTGTGGCATT GGGCATTCAAATTGATTGGGGCAAGATCAAGGGTCTGCCGGAGACGCTGGGGAAGAATGGGGTTTGCTCGAACTACTCGT ATGACACCGTTGAGTATACGTGGCAGAATATTCGCACGTTCCGCGGTGGCAATGCGGTCTTCACCCATCCGAGTACGCCG ATTAAGTGTGGTGGCGCGCCGCAGAAGATCGTCTATCTGGCCGATGACTACTTCCGCCGATCAGGTGCTCGCCAGCAGAG CAAGCTTAACTTCTACCATGCCGGTACAGCAATCTTTGCCGTCAAGAAGTATGCTGATGCGCTAAATCGGGTTGTTGCGC GCAAGGGTATCGATGTTCATTACCAGCACGATCTGATTGAAGTGCGCGGCGAAGCACGTGAAGCGGTGTTCATGAATCTG GCAACGAAGGAGACGGTGACTGTTCACTTCGATATGTTGCACGTAACACCGCCGATGAGTGCGCCGGATGTGATCAAGAG CAGTAAGTTGGCCCATACGACCGGTTGGGTAGAGGTTGATAAGCATACGTTGCAGCACGTGCGCTATCCCAACGTCTTTA GCCTGGGCGACTGCTCGAATCTGCCGACATCGAAGACAGGAGCAGCGATCCGTAAGCAGGCACCGGTACTGGTTGCGAAT CTGATGGCAGCAATGGCAAATGAGACACTGCCTGCCACTTACGACGGCTATACCTCGTGTCCGTTGGTGACCGGTTATGG CAGCCTGATCCTGGCTGAGTTCGATTATACCAACCAACCCAAAGAGAGCTTCCCCTTCGATCAGTCCCAGGAGCGCTACA GTATGTATGCGCTGAAGGCATACGGCTTGCCGGCGATGTACTGGAACGGTATGCTGCGTGGTCGGATGTAA
Upstream 100 bases:
>100_bases TTCGCCGAACGATTCGGTCAGAAATTACCGGGCTAGTTAGAAACTCGTTACTGGCATGTCGCAGCACAAGCTGCTATTCG CAAGAGAAAGAGGTACTGCT
Downstream 100 bases:
>100_bases GAAGGGGTGAGGGTTTCTAAAGTTGATATAATTACCGCCAGCAAGAACCCTTTGTCTTATTGCCGTCATGAATTGCGATA ACGGGACGGGTTTCAAAACC
Product: FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Products: NA
Alternate protein names: FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Oxidoreductase; Pyridine Nucleotide-Disulphide Oxidoreductase; NAD(FAD)-Dependent Dehydrogenase; SulfideQuinone Oxidoreductase; Sulfide Dehydrogenase Flavoprotein Subunit; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Sulfide Dehydrogenase; Twin-Arginine Translocation Pathway Signal; Sulfide-Quinone Reductase; Flavoprotein Reductase; NADH Dehydrogenase FAD-Containing Subunit; Sulfide Quinone Oxidoreductase-Like Protein; FAD-Dependent Pyridine Nucleotide-Disulphideoxido Reductase; Sulfide-Quinone Oxidoreductase; Pyridine Nucleotide-Disulfide Oxidoreductase; Sulfide Dehydrogenase Flavoprotein; Anti-Anti-Sigma Regulatory Factor; Sulfide Quinone-Rductase; Filamentous Hemagglutinin; Sulphide Quinone Reductase; Flavoprotein Reductase Conjectural; NAD(Fad)-Dependent Dehydrogenase Protein; Oxidoreductase FAD-Dependent; Pyridine Nucleotide-Disulfide Family Oxidoreductase; Oxidoreductase Family Protein; Flavoprotein Reductase-Like Protein; Oxidoreductase Pyridine Nucleotide-Disulphide Family; Pyridine Nucleotide-Disulfide Oxidoreductase Family Protein; Pyridine Nucleotide-Disulphide Oxidoreductase Class-II; Dehydrogenase; Sulfide-Quinone Reductase Related Protein; SulfideQuinone Reductase; Pyridine Nucleotide-Disulfide Oxidoreductase Family; NAD(FAD)-Dependent Dehydrogenase-Like Protein; Sulfide Dehydrogenase Related Protein; Dehydrogenase/Reductase
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MAKSHYQVVIAGGGTGGLTVAAQLMDQPNPPEVALIEPSTVHYYQPLWTLVGGGVFPREQSARPEADYIPPGVTWIKEAV KAFDPDANSLTLSNGETITYDYLVVALGIQIDWGKIKGLPETLGKNGVCSNYSYDTVEYTWQNIRTFRGGNAVFTHPSTP IKCGGAPQKIVYLADDYFRRSGARQQSKLNFYHAGTAIFAVKKYADALNRVVARKGIDVHYQHDLIEVRGEAREAVFMNL ATKETVTVHFDMLHVTPPMSAPDVIKSSKLAHTTGWVEVDKHTLQHVRYPNVFSLGDCSNLPTSKTGAAIRKQAPVLVAN LMAAMANETLPATYDGYTSCPLVTGYGSLILAEFDYTNQPKESFPFDQSQERYSMYALKAYGLPAMYWNGMLRGRM
Sequences:
>Translated_396_residues MAKSHYQVVIAGGGTGGLTVAAQLMDQPNPPEVALIEPSTVHYYQPLWTLVGGGVFPREQSARPEADYIPPGVTWIKEAV KAFDPDANSLTLSNGETITYDYLVVALGIQIDWGKIKGLPETLGKNGVCSNYSYDTVEYTWQNIRTFRGGNAVFTHPSTP IKCGGAPQKIVYLADDYFRRSGARQQSKLNFYHAGTAIFAVKKYADALNRVVARKGIDVHYQHDLIEVRGEAREAVFMNL ATKETVTVHFDMLHVTPPMSAPDVIKSSKLAHTTGWVEVDKHTLQHVRYPNVFSLGDCSNLPTSKTGAAIRKQAPVLVAN LMAAMANETLPATYDGYTSCPLVTGYGSLILAEFDYTNQPKESFPFDQSQERYSMYALKAYGLPAMYWNGMLRGRM >Mature_395_residues AKSHYQVVIAGGGTGGLTVAAQLMDQPNPPEVALIEPSTVHYYQPLWTLVGGGVFPREQSARPEADYIPPGVTWIKEAVK AFDPDANSLTLSNGETITYDYLVVALGIQIDWGKIKGLPETLGKNGVCSNYSYDTVEYTWQNIRTFRGGNAVFTHPSTPI KCGGAPQKIVYLADDYFRRSGARQQSKLNFYHAGTAIFAVKKYADALNRVVARKGIDVHYQHDLIEVRGEAREAVFMNLA TKETVTVHFDMLHVTPPMSAPDVIKSSKLAHTTGWVEVDKHTLQHVRYPNVFSLGDCSNLPTSKTGAAIRKQAPVLVANL MAAMANETLPATYDGYTSCPLVTGYGSLILAEFDYTNQPKESFPFDQSQERYSMYALKAYGLPAMYWNGMLRGRM
Specific function: Unknown
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI10864011, Length=394, Percent_Identity=53.5532994923858, Blast_Score=441, Evalue=1e-124, Organism=Caenorhabditis elegans, GI17539680, Length=419, Percent_Identity=37.2315035799523, Blast_Score=289, Evalue=2e-78, Organism=Caenorhabditis elegans, GI115534373, Length=341, Percent_Identity=39.5894428152493, Blast_Score=277, Evalue=9e-75, Organism=Drosophila melanogaster, GI24657386, Length=382, Percent_Identity=46.3350785340314, Blast_Score=354, Evalue=5e-98, Organism=Drosophila melanogaster, GI24657391, Length=382, Percent_Identity=46.3350785340314, Blast_Score=354, Evalue=5e-98,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43692; Mature: 43561
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKSHYQVVIAGGGTGGLTVAAQLMDQPNPPEVALIEPSTVHYYQPLWTLVGGGVFPREQ CCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCEEEECCCCEEHHHHHHHHHCCCCCCCCC SARPEADYIPPGVTWIKEAVKAFDPDANSLTLSNGETITYDYLVVALGIQIDWGKIKGLP CCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCEEEEEEEEEEEEEEEEHHHCCCCH ETLGKNGVCSNYSYDTVEYTWQNIRTFRGGNAVFTHPSTPIKCGGAPQKIVYLADDYFRR HHHCCCCCCCCCCCCHHHHHHHHHHEECCCCEEEECCCCCEEECCCCCEEEEECHHHHHH SGARQQSKLNFYHAGTAIFAVKKYADALNRVVARKGIDVHYQHDLIEVRGEAREAVFMNL CCCCHHHCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHCCCCCEEEEEEE ATKETVTVHFDMLHVTPPMSAPDVIKSSKLAHTTGWVEVDKHTLQHVRYPNVFSLGDCSN CCCCEEEEEEEEEEECCCCCCCHHHHCCCCEECCCCEEECHHHHHHCCCCCEEECCCCCC LPTSKTGAAIRKQAPVLVANLMAAMANETLPATYDGYTSCPLVTGYGSLILAEFDYTNQP CCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCC KESFPFDQSQERYSMYALKAYGLPAMYWNGMLRGRM HHCCCCCCCCHHHEEEEEECCCCCHHHHCCEECCCC >Mature Secondary Structure AKSHYQVVIAGGGTGGLTVAAQLMDQPNPPEVALIEPSTVHYYQPLWTLVGGGVFPREQ CCCCEEEEEEECCCCHHHHHHHHHCCCCCCCEEEECCCCEEHHHHHHHHHCCCCCCCCC SARPEADYIPPGVTWIKEAVKAFDPDANSLTLSNGETITYDYLVVALGIQIDWGKIKGLP CCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCEEEEEEEEEEEEEEEEHHHCCCCH ETLGKNGVCSNYSYDTVEYTWQNIRTFRGGNAVFTHPSTPIKCGGAPQKIVYLADDYFRR HHHCCCCCCCCCCCCHHHHHHHHHHEECCCCEEEECCCCCEEECCCCCEEEEECHHHHHH SGARQQSKLNFYHAGTAIFAVKKYADALNRVVARKGIDVHYQHDLIEVRGEAREAVFMNL CCCCHHHCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHCCCCCEEEEEEE ATKETVTVHFDMLHVTPPMSAPDVIKSSKLAHTTGWVEVDKHTLQHVRYPNVFSLGDCSN CCCCEEEEEEEEEEECCCCCCCHHHHCCCCEECCCCEEECHHHHHHCCCCCEEECCCCCC LPTSKTGAAIRKQAPVLVANLMAAMANETLPATYDGYTSCPLVTGYGSLILAEFDYTNQP CCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCC KESFPFDQSQERYSMYALKAYGLPAMYWNGMLRGRM HHCCCCCCCCHHHEEEEEECCCCCHHHHCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA