| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527391
Identifier: 222527391
GI number: 222527391
Start: 5184228
End: 5185457
Strand: Reverse
Name: 222527391
Synonym: Chy400_4182
Alternate gene names: NA
Gene position: 5185457-5184228 (Counterclockwise)
Preceding gene: 222527393
Following gene: 222527390
Centisome position: 98.42
GC content: 56.91
Gene sequence:
>1230_bases ATGAGAGTCCGCGTTGTTCACTGGCCGTTGTTGGTGCTTGTCCTGTTCAGTCTGCTGGTAGCTGCCTGTGGAACGCAACC GGCTGCTCAACCAACGGCTGGCCCCGCTGAACCAACGTCAGCCGCCGGCGAGGAGTTCACTTTTGGGATGGTGCTGGTCG GGCCAATTAACGATGGTGGCTGGAATCAGGCCCATTACGAGGCCGCCCAGTATGTGGTTGAGAAGCTGCCGGGCGTGAAG TTTATCTACATTGATAAGGTCAATCCGGCAGATCGACCGAATGTCAAGGTTGAGCAGGCTATCGAAGAGTTGATCGGTCA GGGGGCACGCCTGATCATCACCAACTCGGCGGAATTCGCCGATGGCACTAATGTTGCTGCTGCTGCCCATCCTGAGGTGG CGTTTATTCATGCGTCCGGTGACAAGGTGCTGACCGGTGAAGCGCCGGCCAATGTGCGAAACCTGATGGGTCGTATGGAA TACGGGAAGATGATTGCCGGCTGTGCGGCGGCGCTGACGACTGAAGCCGGGCGGCTGGCTTACCTTGGCCCGCTGATCGA CCCCGAGACTCGCCGGTTGGTGAATTCAACCTATCTCGGTGCACGTTATTGCTGGGAAAACTATCGCGGTCGTTCAGCAG ATGATCTGGCCTTTAAGGTGACATGGATCGGTTTCTGGTTCAACATTCCCGGTGTGACGCTTGATCCAACCAAGGTTGCT AACGATTTTATTAACGAGGGCTACGACGTTATTCTGTCAGGGATCGATACCACTGAGGCAATTGTCGAAGCCAATAAGGC AACGCAGGCCGGGAAGCGGGTCTTTGCGGTGCCCTACGATTTCAAAGGTGCCTGCGCCCAGGGTGAGGCGGTCTGTCTGG GTGTGCCGTACTTCAATTGGGGTCCCGATTACAAGCGTCTGGTTGAGCTGGCCCGCGCCGGTCAGTGGGAGCCGGCCTGG GAGTGGGTTGGGCCGAACTGGAGCAACTTGAACGATCCTGACACGAGCATGATCGGTTTTGTGAAGGGGCCGGCGCTGAG TGCTGAGAATGCCGCGAAGCTTGATGAGTTCATTGCAAAGCTGGCCGATGGTAGCCTGAATCTCTTCACCGGCCCACTGT ACTATCAGGATGGAAGTGTCTTTGTGCCGGAAGGTCAGGTCGCCGACGATAAGACGATCTGGTATACCTCGCAGTTGCTG GCCGGTATCGAAGGTCAGAGTGCGCCGTAA
Upstream 100 bases:
>100_bases GCAAAACCGTCTCGGCGCAGCGATGGCAATGACTTGCTCATCGGTTGCGCCGCTTCGTTGTTCGTGTTCGGATTTGCAGA TGCTCACAAGGAGTCGACCG
Downstream 100 bases:
>100_bases TAACCACGTGGTAGAGACGGGCATCTTGCCCGTCTCTATTTGTTAGCGGAGTGAAGCGTCTCTGCAAGATTGAAGATTGC TTAATCTTGACTGACACGAC
Product: basic membrane lipoprotein
Products: NA
Alternate protein names: Bmp Family Protein; Basic Membrane Protein; Bmp Family Membrane Protein; Lipoprotein; ABC Transporter Periplasmic/Surface Lipoprotein; ABC Transporter; ABC Transporter Periplasmic Protein Surface Lipoprotein; Basic Membrane Lipoprotein Family; ABC Transporter Periplasmic Protein; Outer Membrane Lipoprotein; Basic Membrane Lipoprotein Family Protein; Surface Lipoprotein; Signal Peptide Protein
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MRVRVVHWPLLVLVLFSLLVAACGTQPAAQPTAGPAEPTSAAGEEFTFGMVLVGPINDGGWNQAHYEAAQYVVEKLPGVK FIYIDKVNPADRPNVKVEQAIEELIGQGARLIITNSAEFADGTNVAAAAHPEVAFIHASGDKVLTGEAPANVRNLMGRME YGKMIAGCAAALTTEAGRLAYLGPLIDPETRRLVNSTYLGARYCWENYRGRSADDLAFKVTWIGFWFNIPGVTLDPTKVA NDFINEGYDVILSGIDTTEAIVEANKATQAGKRVFAVPYDFKGACAQGEAVCLGVPYFNWGPDYKRLVELARAGQWEPAW EWVGPNWSNLNDPDTSMIGFVKGPALSAENAAKLDEFIAKLADGSLNLFTGPLYYQDGSVFVPEGQVADDKTIWYTSQLL AGIEGQSAP
Sequences:
>Translated_409_residues MRVRVVHWPLLVLVLFSLLVAACGTQPAAQPTAGPAEPTSAAGEEFTFGMVLVGPINDGGWNQAHYEAAQYVVEKLPGVK FIYIDKVNPADRPNVKVEQAIEELIGQGARLIITNSAEFADGTNVAAAAHPEVAFIHASGDKVLTGEAPANVRNLMGRME YGKMIAGCAAALTTEAGRLAYLGPLIDPETRRLVNSTYLGARYCWENYRGRSADDLAFKVTWIGFWFNIPGVTLDPTKVA NDFINEGYDVILSGIDTTEAIVEANKATQAGKRVFAVPYDFKGACAQGEAVCLGVPYFNWGPDYKRLVELARAGQWEPAW EWVGPNWSNLNDPDTSMIGFVKGPALSAENAAKLDEFIAKLADGSLNLFTGPLYYQDGSVFVPEGQVADDKTIWYTSQLL AGIEGQSAP >Mature_409_residues MRVRVVHWPLLVLVLFSLLVAACGTQPAAQPTAGPAEPTSAAGEEFTFGMVLVGPINDGGWNQAHYEAAQYVVEKLPGVK FIYIDKVNPADRPNVKVEQAIEELIGQGARLIITNSAEFADGTNVAAAAHPEVAFIHASGDKVLTGEAPANVRNLMGRME YGKMIAGCAAALTTEAGRLAYLGPLIDPETRRLVNSTYLGARYCWENYRGRSADDLAFKVTWIGFWFNIPGVTLDPTKVA NDFINEGYDVILSGIDTTEAIVEANKATQAGKRVFAVPYDFKGACAQGEAVCLGVPYFNWGPDYKRLVELARAGQWEPAW EWVGPNWSNLNDPDTSMIGFVKGPALSAENAAKLDEFIAKLADGSLNLFTGPLYYQDGSVFVPEGQVADDKTIWYTSQLL AGIEGQSAP
Specific function: Unknown
COG id: COG1744
COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44184; Mature: 44184
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVRVVHWPLLVLVLFSLLVAACGTQPAAQPTAGPAEPTSAAGEEFTFGMVLVGPINDGG CEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCC WNQAHYEAAQYVVEKLPGVKFIYIDKVNPADRPNVKVEQAIEELIGQGARLIITNSAEFA CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCC DGTNVAAAAHPEVAFIHASGDKVLTGEAPANVRNLMGRMEYGKMIAGCAAALTTEAGRLA CCCCCEEECCCCEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE YLGPLIDPETRRLVNSTYLGARYCWENYRGRSADDLAFKVTWIGFWFNIPGVTLDPTKVA EECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEECCCCEECHHHHH NDFINEGYDVILSGIDTTEAIVEANKATQAGKRVFAVPYDFKGACAQGEAVCLGVPYFNW HHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEECCCCCC GPDYKRLVELARAGQWEPAWEWVGPNWSNLNDPDTSMIGFVKGPALSAENAAKLDEFIAK CCCHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHH LADGSLNLFTGPLYYQDGSVFVPEGQVADDKTIWYTSQLLAGIEGQSAP HCCCCCEEEECCEEEECCCEECCCCCCCCCCEEEEHHHHHHCCCCCCCC >Mature Secondary Structure MRVRVVHWPLLVLVLFSLLVAACGTQPAAQPTAGPAEPTSAAGEEFTFGMVLVGPINDGG CEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCC WNQAHYEAAQYVVEKLPGVKFIYIDKVNPADRPNVKVEQAIEELIGQGARLIITNSAEFA CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCC DGTNVAAAAHPEVAFIHASGDKVLTGEAPANVRNLMGRMEYGKMIAGCAAALTTEAGRLA CCCCCEEECCCCEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE YLGPLIDPETRRLVNSTYLGARYCWENYRGRSADDLAFKVTWIGFWFNIPGVTLDPTKVA EECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEECCCCEECHHHHH NDFINEGYDVILSGIDTTEAIVEANKATQAGKRVFAVPYDFKGACAQGEAVCLGVPYFNW HHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEECCCCCC GPDYKRLVELARAGQWEPAWEWVGPNWSNLNDPDTSMIGFVKGPALSAENAAKLDEFIAK CCCHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHH LADGSLNLFTGPLYYQDGSVFVPEGQVADDKTIWYTSQLLAGIEGQSAP HCCCCCEEEECCEEEECCCEECCCCCCCCCCEEEEHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA