Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is 222527371
Identifier: 222527371
GI number: 222527371
Start: 5153271
End: 5154050
Strand: Direct
Name: 222527371
Synonym: Chy400_4161
Alternate gene names: NA
Gene position: 5153271-5154050 (Clockwise)
Preceding gene: 222527369
Following gene: 222527372
Centisome position: 97.8
GC content: 48.97
Gene sequence:
>780_bases ATGACCATCAAGAGTATCTGCGGACAAGTCGAGGATGTACTAGAGACCTTCGATACAGTGAGTCTGGCTGAGCTGAGTCA GACCAGTTTACTCAATCGGATCGACACCAAATTCGTGGTGCCATTGCAGACTCTGTATCCGATATTGAGCGCAGTTAGCC ACGTTTATCGCGTATTACGCATGAATGGCGAGTTGCTTCATGGCTACCGCAGTCTCTACTTTGACACAACAGATTTTGAT CTGTATTACCAGCATCACAATGAACGACGGCCACGATGGAAGGTACGCAGCCGCCAATACCTCAGCAATAATCAGGCATT CTTTGAATTAAAGGCTAAATGCGCTAATGGACGCACCAGTAAGCAGCGTATACCTACCACAACGATGGTCACAGCGATGA CACCCGAAACTGAAGCATTTCTGGCCTTACACGCGCCGGAATTGTGTCATCGCCTGCAACCAAAGCTCTGGAGTGAATAC CGACGAGCCACACTCATTGATCCAGATGGAAGTGAGCGCATCACCATTGACACCGATCTGCGCTTCCACTCGCACCATCG AATGATCACACTCGATCATCTGGCAATTATTGAACTGAAACAGACGAACGCACGTCGCACCTCGCCCATCCTTCAACATT TGCGAGCAGCCGGCATCCGACCACGTAGCTTTAGCAAGTATTGCATGGGTCTACTGAGTCTGTATCCATCGTTAAAGCAC AATACATTCAAACCATCGCTGCGTCTGATTGAACGTATTCAGGAGGCTTCCCATGTCTGA
Upstream 100 bases:
>100_bases CAACTTCTAAACAACCTCCCACTACAATCGCACGTGAAGAACGGCAGCGGCGAAACGCTGATCGGGATAGCGTCGCCCAC GAGTATTCGAGAGTACGAAG
Downstream 100 bases:
>100_bases ATGGCTAACATTGTTGCTGAACGCAAGCCTCAATCTCTTGGTGGCAATTATCATTGTGCGTGGTATTTATTACACGACCA CACCAGAACGACACTTTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MTIKSICGQVEDVLETFDTVSLAELSQTSLLNRIDTKFVVPLQTLYPILSAVSHVYRVLRMNGELLHGYRSLYFDTTDFD LYYQHHNERRPRWKVRSRQYLSNNQAFFELKAKCANGRTSKQRIPTTTMVTAMTPETEAFLALHAPELCHRLQPKLWSEY RRATLIDPDGSERITIDTDLRFHSHHRMITLDHLAIIELKQTNARRTSPILQHLRAAGIRPRSFSKYCMGLLSLYPSLKH NTFKPSLRLIERIQEASHV
Sequences:
>Translated_259_residues MTIKSICGQVEDVLETFDTVSLAELSQTSLLNRIDTKFVVPLQTLYPILSAVSHVYRVLRMNGELLHGYRSLYFDTTDFD LYYQHHNERRPRWKVRSRQYLSNNQAFFELKAKCANGRTSKQRIPTTTMVTAMTPETEAFLALHAPELCHRLQPKLWSEY RRATLIDPDGSERITIDTDLRFHSHHRMITLDHLAIIELKQTNARRTSPILQHLRAAGIRPRSFSKYCMGLLSLYPSLKH NTFKPSLRLIERIQEASHV >Mature_258_residues TIKSICGQVEDVLETFDTVSLAELSQTSLLNRIDTKFVVPLQTLYPILSAVSHVYRVLRMNGELLHGYRSLYFDTTDFDL YYQHHNERRPRWKVRSRQYLSNNQAFFELKAKCANGRTSKQRIPTTTMVTAMTPETEAFLALHAPELCHRLQPKLWSEYR RATLIDPDGSERITIDTDLRFHSHHRMITLDHLAIIELKQTNARRTSPILQHLRAAGIRPRSFSKYCMGLLSLYPSLKHN TFKPSLRLIERIQEASHV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30150; Mature: 30019
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIKSICGQVEDVLETFDTVSLAELSQTSLLNRIDTKFVVPLQTLYPILSAVSHVYRVLR CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHH MNGELLHGYRSLYFDTTDFDLYYQHHNERRPRWKVRSRQYLSNNQAFFELKAKCANGRTS HCCHHHHHHHHHEECCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEHHHCCCCCC KQRIPTTTMVTAMTPETEAFLALHAPELCHRLQPKLWSEYRRATLIDPDGSERITIDTDL HHHCCCEEEEEEECCCCHHHEEECCHHHHHHCCHHHHHHHHHCEEECCCCCCEEEEEECC RFHSHHRMITLDHLAIIELKQTNARRTSPILQHLRAAGIRPRSFSKYCMGLLSLYPSLKH EECCCCCEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC NTFKPSLRLIERIQEASHV CCCCHHHHHHHHHHHHCCC >Mature Secondary Structure TIKSICGQVEDVLETFDTVSLAELSQTSLLNRIDTKFVVPLQTLYPILSAVSHVYRVLR CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHH MNGELLHGYRSLYFDTTDFDLYYQHHNERRPRWKVRSRQYLSNNQAFFELKAKCANGRTS HCCHHHHHHHHHEECCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEHHHCCCCCC KQRIPTTTMVTAMTPETEAFLALHAPELCHRLQPKLWSEYRRATLIDPDGSERITIDTDL HHHCCCEEEEEEECCCCHHHEEECCHHHHHHCCHHHHHHHHHCEEECCCCCCEEEEEECC RFHSHHRMITLDHLAIIELKQTNARRTSPILQHLRAAGIRPRSFSKYCMGLLSLYPSLKH EECCCCCEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC NTFKPSLRLIERIQEASHV CCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA