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The map label for this gene is arnC [H]

Identifier: 222527296

GI number: 222527296

Start: 5051767

End: 5053002

Strand: Direct

Name: arnC [H]

Synonym: Chy400_4081

Alternate gene names: 222527296

Gene position: 5051767-5053002 (Clockwise)

Preceding gene: 222527295

Following gene: 222527297

Centisome position: 95.88

GC content: 59.22

Gene sequence:

>1236_bases
ATGGCGACACTTTCAGTTGTGATTCCGGCGTACAACGAAGAGGATGGCATTGCGGCCATTGTTGAGCGCGTGCTGGCAAT
TCGACCGGCGCTCAAAGAGGTGGGCGTAGATGATCTGGAGTGCATCGTTGTTGATGATGGCTCGAAAGATCGTACCGCGG
CTATCGTGCAGGGATTTGGTGATCAAGTACGCCTGATCCGGCAACAGAATCGTGGCTATGGCGGCGCGTTGAAGACCGGT
TTTAGTCAGGCCCGTGGCGAACTGATCGGCTTCCTTGATGCCGACAGCACCTATCCGCCAGAATACTTTCCGGCGATGTG
CCGGGAGGTGCTGGCCGGCGCCGATATTGTGATCGGGAGTCGTATGGCCGGTGCCCATAGCGAGATGCCGCTGGTACGCC
GGATCGGTAACACCATCTTCGCCACCATGCTCTCGCTGGTCGCCGGTGTACGCATTAGCGATAGCGCAAGTGGCCAGCGC
GTCCTACGGCGCTCAATTCTTCCGATCATCTACCCATTACCGAACACCCTCGATTTTACGCCGGCAATGAGCACCCGTGC
CCTTCACGAAGGGCTGCGCATGGTAGAGATTCCCATTCCCTACAAAGAGCGCTCTGGGCGCAGCAAGCTCCACGTGATCC
GCGATGGCCTCCGCTTTACCAAATCGATTGTCTGGACGGCCCTGACCTATAATCCGGTTCGTATCTTTGGCGGATTAGGA
CTCCTCTTGCTCCTCCTGGCCGGCCTGCTCATTCTGGGGCAGAGCATTGGCATCGCGCTCGGCATGCTGCTTGGCTGGTC
GTTCCCGCAACTCTTCGGCGCCCTGGTGCTGGCCGTCGCCGGTGTGACCCTCTACACCACCGGCACGTCGTTCAGTTATC
TGGTTGCACTGTTCCACAAACGCGCCATCCGCCAGGGTCTGTTTGGTCGTCGCGGAAACGGACGACGGATTGAACGCCAT
TACTGGTGGCTGGGATTGCTGGCGATGATTGGGGGTGTCATGACCTACGTCGCGGCTGTTGCCTTCGATCTGACCAATCC
CGCCCTGCCTCATTCGTGGTTTGCGCCGGTCGTGAGTGCCATGCTTGTTCTGATGGGAGTACAGTTGGTCAGTGCGTGGG
GGCTGGCGCGGGTGCTCGCCGAACTAAGCCGCCGCGAGAGCGAGCAGGAAGCTGACCTGAACTGGACATACGTTCCACTC
ACAACACCAGTCGAGACTGCGCCACAAACCGCCTGA

Upstream 100 bases:

>100_bases
CGTGCCGATCCGTTACCACACGAACGCCTGACTGTACCGGTCTACTGACACAAACGCGACACCTTATCTGGCACGTCAGC
AACCATGGGGAGGGGAACGC

Downstream 100 bases:

>100_bases
AACGAGGACACCGGTGGAAGCATTTTACCAGTGGAGCGAACAGAATCTTGGTCAAGGCCACTACGTTATCGGCTACCTGA
TTGTTCTAATCAGTCACAAC

Product: glycosyl transferase family 2 protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MATLSVVIPAYNEEDGIAAIVERVLAIRPALKEVGVDDLECIVVDDGSKDRTAAIVQGFGDQVRLIRQQNRGYGGALKTG
FSQARGELIGFLDADSTYPPEYFPAMCREVLAGADIVIGSRMAGAHSEMPLVRRIGNTIFATMLSLVAGVRISDSASGQR
VLRRSILPIIYPLPNTLDFTPAMSTRALHEGLRMVEIPIPYKERSGRSKLHVIRDGLRFTKSIVWTALTYNPVRIFGGLG
LLLLLLAGLLILGQSIGIALGMLLGWSFPQLFGALVLAVAGVTLYTTGTSFSYLVALFHKRAIRQGLFGRRGNGRRIERH
YWWLGLLAMIGGVMTYVAAVAFDLTNPALPHSWFAPVVSAMLVLMGVQLVSAWGLARVLAELSRRESEQEADLNWTYVPL
TTPVETAPQTA

Sequences:

>Translated_411_residues
MATLSVVIPAYNEEDGIAAIVERVLAIRPALKEVGVDDLECIVVDDGSKDRTAAIVQGFGDQVRLIRQQNRGYGGALKTG
FSQARGELIGFLDADSTYPPEYFPAMCREVLAGADIVIGSRMAGAHSEMPLVRRIGNTIFATMLSLVAGVRISDSASGQR
VLRRSILPIIYPLPNTLDFTPAMSTRALHEGLRMVEIPIPYKERSGRSKLHVIRDGLRFTKSIVWTALTYNPVRIFGGLG
LLLLLLAGLLILGQSIGIALGMLLGWSFPQLFGALVLAVAGVTLYTTGTSFSYLVALFHKRAIRQGLFGRRGNGRRIERH
YWWLGLLAMIGGVMTYVAAVAFDLTNPALPHSWFAPVVSAMLVLMGVQLVSAWGLARVLAELSRRESEQEADLNWTYVPL
TTPVETAPQTA
>Mature_410_residues
ATLSVVIPAYNEEDGIAAIVERVLAIRPALKEVGVDDLECIVVDDGSKDRTAAIVQGFGDQVRLIRQQNRGYGGALKTGF
SQARGELIGFLDADSTYPPEYFPAMCREVLAGADIVIGSRMAGAHSEMPLVRRIGNTIFATMLSLVAGVRISDSASGQRV
LRRSILPIIYPLPNTLDFTPAMSTRALHEGLRMVEIPIPYKERSGRSKLHVIRDGLRFTKSIVWTALTYNPVRIFGGLGL
LLLLLAGLLILGQSIGIALGMLLGWSFPQLFGALVLAVAGVTLYTTGTSFSYLVALFHKRAIRQGLFGRRGNGRRIERHY
WWLGLLAMIGGVMTYVAAVAFDLTNPALPHSWFAPVVSAMLVLMGVQLVSAWGLARVLAELSRRESEQEADLNWTYVPLT
TPVETAPQTA

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1788588, Length=246, Percent_Identity=28.0487804878049, Blast_Score=82, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI25146207, Length=189, Percent_Identity=34.3915343915344, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71999402, Length=241, Percent_Identity=33.6099585062241, Blast_Score=75, Evalue=8e-14,
Organism=Saccharomyces cerevisiae, GI6325029, Length=254, Percent_Identity=29.5275590551181, Blast_Score=75, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24582769, Length=227, Percent_Identity=30.8370044052863, Blast_Score=68, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24585265, Length=222, Percent_Identity=28.3783783783784, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 44748; Mature: 44617

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLSVVIPAYNEEDGIAAIVERVLAIRPALKEVGVDDLECIVVDDGSKDRTAAIVQGFG
CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHCCC
DQVRLIRQQNRGYGGALKTGFSQARGELIGFLDADSTYPPEYFPAMCREVLAGADIVIGS
HHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCEEECC
RMAGAHSEMPLVRRIGNTIFATMLSLVAGVRISDSASGQRVLRRSILPIIYPLPNTLDFT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCEEECCCCCCCCC
PAMSTRALHEGLRMVEIPIPYKERSGRSKLHVIRDGLRFTKSIVWTALTYNPVRIFGGLG
CCHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LLLLLLAGLLILGQSIGIALGMLLGWSFPQLFGALVLAVAGVTLYTTGTSFSYLVALFHK
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHEEECCCHHHHHHHHHHH
RAIRQGLFGRRGNGRRIERHYWWLGLLAMIGGVMTYVAAVAFDLTNPALPHSWFAPVVSA
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
MLVLMGVQLVSAWGLARVLAELSRRESEQEADLNWTYVPLTTPVETAPQTA
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEEECCCCCCCCCCC
>Mature Secondary Structure 
ATLSVVIPAYNEEDGIAAIVERVLAIRPALKEVGVDDLECIVVDDGSKDRTAAIVQGFG
CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHCCC
DQVRLIRQQNRGYGGALKTGFSQARGELIGFLDADSTYPPEYFPAMCREVLAGADIVIGS
HHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCEEECC
RMAGAHSEMPLVRRIGNTIFATMLSLVAGVRISDSASGQRVLRRSILPIIYPLPNTLDFT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCEEECCCCCCCCC
PAMSTRALHEGLRMVEIPIPYKERSGRSKLHVIRDGLRFTKSIVWTALTYNPVRIFGGLG
CCHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LLLLLLAGLLILGQSIGIALGMLLGWSFPQLFGALVLAVAGVTLYTTGTSFSYLVALFHK
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHEEECCCHHHHHHHHHHH
RAIRQGLFGRRGNGRRIERHYWWLGLLAMIGGVMTYVAAVAFDLTNPALPHSWFAPVVSA
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
MLVLMGVQLVSAWGLARVLAELSRRESEQEADLNWTYVPLTTPVETAPQTA
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA