| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is fabG [H]
Identifier: 222527290
GI number: 222527290
Start: 5045233
End: 5045937
Strand: Direct
Name: fabG [H]
Synonym: Chy400_4075
Alternate gene names: 222527290
Gene position: 5045233-5045937 (Clockwise)
Preceding gene: 222527289
Following gene: 222527291
Centisome position: 95.75
GC content: 57.73
Gene sequence:
>705_bases GTGACTGAGCGCGAAGTCGTGCTTATTACCGGGAGCAGCCGGGGCATTGGTCGCTTCCTGGTCGAACACTTTCTGGCACG GGGAGCACTGGTCGAAGGTTGCGCCCGCAATCCTGTCGACTGGGAACTACCCGGCTACACCCACCACCAGGTTGATGTCG CCAACGAGGGACAGGTCAAGGCGATGATCAGTTCGATCCAACGCCGGCATGGTCGCCTCGATATTGCTATCAACAACGCC GGCATTGCGGCGATGAATCACGCGCTCCTTACACCGAGCGAAACGGCCGGTCGCATTCTCAACATTAACGTCCTGGGCAG TTTTCTGGTCTGTCGGGAAGCAGCCAAACTGATGCGTCGGCGCAACTATGGCCGCATCGTTAATTTCAGTACCATTGCTG TGCCGTTACGGCTTGAGGGTGAAGCGCTGTACGCCGCATCCAAGAGCGCGGTCGAGACCATGACCCGTATCCTCGCCCGT GAATTTGCACCCTTCGGGATTACCGTGAACGCGATTGGCCCGACGCCAATCGAGACCGATCTTATCCGGGGCGTTCCGCA GGAAAAGCTCCAGCACATCATCGATGCACTCGCGATTCGGCGGTTTGGCACCTTTCGCGATGTTGCGCATGTGATTGATT TCTTCGTCAACCCGGCCAGTGATTATGTCACCGGGCAGGTACTTTACCTTGGTGGTGGTGGGTAG
Upstream 100 bases:
>100_bases CTGGCCGATGATCGAGCGATGTCGCAACGAAACAGTCCATTTCGCAGCATCGGTGCCCTGGTCGATTACCTGATGCAGTT GATCGATGAGGAGACGGGCC
Downstream 100 bases:
>100_bases CATCGATCACCGCATGGAGGCCGCTATGAGCATTGCATGGCTACGCGAACGGATGGAGCAATGGGCAAGCCACCCGGCTA TCGTCTGGCATGACCATCCG
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MTEREVVLITGSSRGIGRFLVEHFLARGALVEGCARNPVDWELPGYTHHQVDVANEGQVKAMISSIQRRHGRLDIAINNA GIAAMNHALLTPSETAGRILNINVLGSFLVCREAAKLMRRRNYGRIVNFSTIAVPLRLEGEALYAASKSAVETMTRILAR EFAPFGITVNAIGPTPIETDLIRGVPQEKLQHIIDALAIRRFGTFRDVAHVIDFFVNPASDYVTGQVLYLGGGG
Sequences:
>Translated_234_residues MTEREVVLITGSSRGIGRFLVEHFLARGALVEGCARNPVDWELPGYTHHQVDVANEGQVKAMISSIQRRHGRLDIAINNA GIAAMNHALLTPSETAGRILNINVLGSFLVCREAAKLMRRRNYGRIVNFSTIAVPLRLEGEALYAASKSAVETMTRILAR EFAPFGITVNAIGPTPIETDLIRGVPQEKLQHIIDALAIRRFGTFRDVAHVIDFFVNPASDYVTGQVLYLGGGG >Mature_233_residues TEREVVLITGSSRGIGRFLVEHFLARGALVEGCARNPVDWELPGYTHHQVDVANEGQVKAMISSIQRRHGRLDIAINNAG IAAMNHALLTPSETAGRILNINVLGSFLVCREAAKLMRRRNYGRIVNFSTIAVPLRLEGEALYAASKSAVETMTRILARE FAPFGITVNAIGPTPIETDLIRGVPQEKLQHIIDALAIRRFGTFRDVAHVIDFFVNPASDYVTGQVLYLGGGG
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI40254992, Length=235, Percent_Identity=31.4893617021277, Blast_Score=105, Evalue=4e-23, Organism=Homo sapiens, GI15277342, Length=246, Percent_Identity=28.4552845528455, Blast_Score=94, Evalue=8e-20, Organism=Homo sapiens, GI32483357, Length=250, Percent_Identity=28, Blast_Score=89, Evalue=2e-18, Organism=Homo sapiens, GI59889578, Length=228, Percent_Identity=29.8245614035088, Blast_Score=88, Evalue=8e-18, Organism=Homo sapiens, GI7705925, Length=235, Percent_Identity=27.6595744680851, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI10190704, Length=245, Percent_Identity=31.4285714285714, Blast_Score=85, Evalue=5e-17, Organism=Homo sapiens, GI4758504, Length=258, Percent_Identity=27.906976744186, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI19923817, Length=256, Percent_Identity=24.21875, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI109715829, Length=195, Percent_Identity=30.7692307692308, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI126723750, Length=178, Percent_Identity=29.2134831460674, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI4503817, Length=187, Percent_Identity=29.9465240641711, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI66933014, Length=199, Percent_Identity=24.6231155778894, Blast_Score=71, Evalue=9e-13, Organism=Homo sapiens, GI20149619, Length=191, Percent_Identity=29.3193717277487, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI31542939, Length=206, Percent_Identity=28.1553398058252, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI83715985, Length=258, Percent_Identity=26.3565891472868, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI210032110, Length=213, Percent_Identity=24.8826291079812, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI5031737, Length=240, Percent_Identity=27.5, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI1787335, Length=237, Percent_Identity=29.957805907173, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI2367175, Length=250, Percent_Identity=32.4, Blast_Score=101, Evalue=4e-23, Organism=Escherichia coli, GI2367365, Length=235, Percent_Identity=33.1914893617021, Blast_Score=101, Evalue=5e-23, Organism=Escherichia coli, GI87082160, Length=240, Percent_Identity=27.0833333333333, Blast_Score=98, Evalue=4e-22, Organism=Escherichia coli, GI87082100, Length=246, Percent_Identity=29.2682926829268, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI1790717, Length=238, Percent_Identity=26.4705882352941, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1789208, Length=249, Percent_Identity=28.9156626506024, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI1788459, Length=186, Percent_Identity=27.9569892473118, Blast_Score=81, Evalue=5e-17, Organism=Escherichia coli, GI1789057, Length=197, Percent_Identity=27.9187817258883, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1787905, Length=246, Percent_Identity=28.8617886178862, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1786812, Length=240, Percent_Identity=25.8333333333333, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1789378, Length=253, Percent_Identity=29.2490118577075, Blast_Score=69, Evalue=3e-13, Organism=Caenorhabditis elegans, GI115534694, Length=241, Percent_Identity=30.2904564315353, Blast_Score=90, Evalue=8e-19, Organism=Caenorhabditis elegans, GI71994600, Length=247, Percent_Identity=29.9595141700405, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17555706, Length=246, Percent_Identity=28.4552845528455, Blast_Score=87, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17560676, Length=245, Percent_Identity=26.1224489795918, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI71994604, Length=246, Percent_Identity=29.6747967479675, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17544670, Length=258, Percent_Identity=27.906976744186, Blast_Score=81, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17560332, Length=257, Percent_Identity=29.5719844357977, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17562908, Length=257, Percent_Identity=29.5719844357977, Blast_Score=78, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17538182, Length=213, Percent_Identity=30.5164319248826, Blast_Score=77, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17563726, Length=253, Percent_Identity=29.6442687747036, Blast_Score=77, Evalue=5e-15, Organism=Caenorhabditis elegans, GI25147288, Length=238, Percent_Identity=26.890756302521, Blast_Score=77, Evalue=9e-15, Organism=Caenorhabditis elegans, GI17561402, Length=250, Percent_Identity=25.6, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17559104, Length=257, Percent_Identity=28.4046692607004, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17562906, Length=257, Percent_Identity=29.9610894941634, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17562904, Length=259, Percent_Identity=29.3436293436293, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17531453, Length=257, Percent_Identity=32.295719844358, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17562910, Length=260, Percent_Identity=27.6923076923077, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17560150, Length=252, Percent_Identity=27.7777777777778, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17536651, Length=248, Percent_Identity=27.0161290322581, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17536025, Length=249, Percent_Identity=27.3092369477912, Blast_Score=65, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17508895, Length=157, Percent_Identity=29.9363057324841, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI72000259, Length=256, Percent_Identity=27.734375, Blast_Score=64, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17560220, Length=263, Percent_Identity=28.5171102661597, Blast_Score=64, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=189, Percent_Identity=30.1587301587302, Blast_Score=74, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6324126, Length=191, Percent_Identity=28.2722513089005, Blast_Score=74, Evalue=3e-14, Organism=Drosophila melanogaster, GI24639444, Length=239, Percent_Identity=31.3807531380753, Blast_Score=107, Evalue=5e-24, Organism=Drosophila melanogaster, GI28571526, Length=248, Percent_Identity=30.241935483871, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI21357041, Length=251, Percent_Identity=30.2788844621514, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI23397609, Length=244, Percent_Identity=28.6885245901639, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI17737361, Length=252, Percent_Identity=29.7619047619048, Blast_Score=87, Evalue=8e-18, Organism=Drosophila melanogaster, GI21355319, Length=241, Percent_Identity=26.9709543568465, Blast_Score=85, Evalue=4e-17, Organism=Drosophila melanogaster, GI24644339, Length=246, Percent_Identity=30.0813008130081, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI24643142, Length=237, Percent_Identity=26.5822784810127, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI24648693, Length=220, Percent_Identity=31.3636363636364, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI21355889, Length=220, Percent_Identity=31.3636363636364, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI116007236, Length=216, Percent_Identity=26.3888888888889, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI24644337, Length=178, Percent_Identity=30.3370786516854, Blast_Score=68, Evalue=4e-12, Organism=Drosophila melanogaster, GI28571387, Length=211, Percent_Identity=28.9099526066351, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI24641388, Length=231, Percent_Identity=28.1385281385281, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI21357673, Length=200, Percent_Identity=28, Blast_Score=64, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 25573; Mature: 25442
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEREVVLITGSSRGIGRFLVEHFLARGALVEGCARNPVDWELPGYTHHQVDVANEGQVK CCCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCEEEEECCCCHHH AMISSIQRRHGRLDIAINNAGIAAMNHALLTPSETAGRILNINVLGSFLVCREAAKLMRR HHHHHHHHHCCEEEEEECCCCHHHHCCEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHH RNYGRIVNFSTIAVPLRLEGEALYAASKSAVETMTRILAREFAPFGITVNAIGPTPIETD CCCCCEEEEEEEEEEEEECCCEEEHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHH LIRGVPQEKLQHIIDALAIRRFGTFRDVAHVIDFFVNPASDYVTGQVLYLGGGG HHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCC >Mature Secondary Structure TEREVVLITGSSRGIGRFLVEHFLARGALVEGCARNPVDWELPGYTHHQVDVANEGQVK CCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCEEEEECCCCHHH AMISSIQRRHGRLDIAINNAGIAAMNHALLTPSETAGRILNINVLGSFLVCREAAKLMRR HHHHHHHHHCCEEEEEECCCCHHHHCCEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHH RNYGRIVNFSTIAVPLRLEGEALYAASKSAVETMTRILAREFAPFGITVNAIGPTPIETD CCCCCEEEEEEEEEEEEECCCEEEHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHH LIRGVPQEKLQHIIDALAIRRFGTFRDVAHVIDFFVNPASDYVTGQVLYLGGGG HHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]