| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527288
Identifier: 222527288
GI number: 222527288
Start: 5043592
End: 5044905
Strand: Direct
Name: 222527288
Synonym: Chy400_4073
Alternate gene names: NA
Gene position: 5043592-5044905 (Clockwise)
Preceding gene: 222527287
Following gene: 222527289
Centisome position: 95.72
GC content: 59.36
Gene sequence:
>1314_bases ATGGAGTGCTGCACTAGCCAGCAATGGTATCAGACGGTAGCAAAGCTCACCCTATCGGGCTTGCTCGTCACGTTCATCGC ATTCAGTACATTCCGCGCGTCATCCCCGACCCAGGCCCAGGGTGGCTATTCCTTGCGGTTTTACGGCAGCGGTACCAACG ACCTTGACCGGGTGAAAATACCATTAGGCCCTATCGATACAAATGGACGCATCACCGCTTCCTATCCGATCAACGTTGGC GACACCTTTACCATTGAGTTCTGGATGAAGGCAACCGCAGCCGAGAACAATGCCCCGGCCTGTCCGGGAGGCTGGTACAC TGGCAATATCATTCTTGACCGTGATGTGTTCGGTGCCGGTGATTATGGTGATTACGGGGTGGCCATCTGCAATCAGCGGT TGGTCGTCGGCGTGAGTGTTGGCACCGACGACCGGTTGCTCATCGGCAGTACGGTGGTGACCGACGGCGTCTGGCACCAT ATCGCGATCACCCGCTCGGCGAGCGGACATATCCGTCTCTTCGTTGATGGTCAGCTTGATGGCACCCTGAGCGGTGCCAG TGGGCGGATTGACTACCGCCTCAATCGTATCACTGCCTATCCCACCAGTGATCCGTACCTGGTATTGGGAGCCGAGAAAC ACGATGTTCCCGGTAGTCGTTACTACACCGGCTGGATTGATGATCTGCGCGTGTCGCAGAGTGTGCGTTACACCGACAAT TTCACGCGACCATCAACCCCCCATCCGCTTGACCCTGATACGATTGCGCTCTATCGGTTCGACGAGGGGGCAGGGACGTT CATTGGTGACAGTGCCCCTGGCGGGATAAGCAGCGGCGAACTCAAGCCGCGTCCTGGTGGCGCAGCTCAACACTGGTCAA CTGATACGCCGTTTAGTGGTGGATCAAGTCCTACCTCAACTGCAACAGCAAGCATAACACCGGCTATGACGGCGAGTTCG ACACCGGGTAGCACAGCTACCGCTACATCAACCAGCACCGCTACGCCAACCGGCACGCGCACCACCACACCAACCAGCAC GCGCACCGCTACGCCAACCGGCACGCGCACCGCTACGCCAACCGGCACGCGCACCACCACACCGACCGGCACGCGCACCG CTACGCCAACCGGCACGCGCACCACCACACCGACCGGCACGCGCACCGCTACGCCAACCGGCACGCGCACTGCTCTTCCA ACGCCATCGACGACCCCGTCGGTTAACAGTGCTCCTACAACGCCGACGCCACGGGTTCGGGCGTATATTCCATTGATTAC TCGTTCGCACGTCACATCGTCTGCACAAAGATAG
Upstream 100 bases:
>100_bases TGCGAATCTCACCCTGACCCTGGGCACCACGGCCACCCCTGATGCAGCCGATCCGCTCTGGGTGACATCAGATGCGCCGA CTTCGTAACGGAGACGATGT
Downstream 100 bases:
>100_bases GAGATCAACGTATGACAAGTCTGCCCATTACTCGCACCGACCTCAGCCATCTTGTGATTGAAAGTTTGCGCGACATTCTC GATCAGAGTGGCCGTCCAGC
Product: Laminin G
Products: NA
Alternate protein names: Laminin G
Number of amino acids: Translated: 437; Mature: 437
Protein sequence:
>437_residues MECCTSQQWYQTVAKLTLSGLLVTFIAFSTFRASSPTQAQGGYSLRFYGSGTNDLDRVKIPLGPIDTNGRITASYPINVG DTFTIEFWMKATAAENNAPACPGGWYTGNIILDRDVFGAGDYGDYGVAICNQRLVVGVSVGTDDRLLIGSTVVTDGVWHH IAITRSASGHIRLFVDGQLDGTLSGASGRIDYRLNRITAYPTSDPYLVLGAEKHDVPGSRYYTGWIDDLRVSQSVRYTDN FTRPSTPHPLDPDTIALYRFDEGAGTFIGDSAPGGISSGELKPRPGGAAQHWSTDTPFSGGSSPTSTATASITPAMTASS TPGSTATATSTSTATPTGTRTTTPTSTRTATPTGTRTATPTGTRTTTPTGTRTATPTGTRTTTPTGTRTATPTGTRTALP TPSTTPSVNSAPTTPTPRVRAYIPLITRSHVTSSAQR
Sequences:
>Translated_437_residues MECCTSQQWYQTVAKLTLSGLLVTFIAFSTFRASSPTQAQGGYSLRFYGSGTNDLDRVKIPLGPIDTNGRITASYPINVG DTFTIEFWMKATAAENNAPACPGGWYTGNIILDRDVFGAGDYGDYGVAICNQRLVVGVSVGTDDRLLIGSTVVTDGVWHH IAITRSASGHIRLFVDGQLDGTLSGASGRIDYRLNRITAYPTSDPYLVLGAEKHDVPGSRYYTGWIDDLRVSQSVRYTDN FTRPSTPHPLDPDTIALYRFDEGAGTFIGDSAPGGISSGELKPRPGGAAQHWSTDTPFSGGSSPTSTATASITPAMTASS TPGSTATATSTSTATPTGTRTTTPTSTRTATPTGTRTATPTGTRTTTPTGTRTATPTGTRTTTPTGTRTATPTGTRTALP TPSTTPSVNSAPTTPTPRVRAYIPLITRSHVTSSAQR >Mature_437_residues MECCTSQQWYQTVAKLTLSGLLVTFIAFSTFRASSPTQAQGGYSLRFYGSGTNDLDRVKIPLGPIDTNGRITASYPINVG DTFTIEFWMKATAAENNAPACPGGWYTGNIILDRDVFGAGDYGDYGVAICNQRLVVGVSVGTDDRLLIGSTVVTDGVWHH IAITRSASGHIRLFVDGQLDGTLSGASGRIDYRLNRITAYPTSDPYLVLGAEKHDVPGSRYYTGWIDDLRVSQSVRYTDN FTRPSTPHPLDPDTIALYRFDEGAGTFIGDSAPGGISSGELKPRPGGAAQHWSTDTPFSGGSSPTSTATASITPAMTASS TPGSTATATSTSTATPTGTRTTTPTSTRTATPTGTRTATPTGTRTTTPTGTRTATPTGTRTTTPTGTRTATPTGTRTALP TPSTTPSVNSAPTTPTPRVRAYIPLITRSHVTSSAQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45945; Mature: 45945
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MECCTSQQWYQTVAKLTLSGLLVTFIAFSTFRASSPTQAQGGYSLRFYGSGTNDLDRVKI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCEEEEE PLGPIDTNGRITASYPINVGDTFTIEFWMKATAAENNAPACPGGWYTGNIILDRDVFGAG ECCCCCCCCEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCEEECCEEEECCCCCCC DYGDYGVAICNQRLVVGVSVGTDDRLLIGSTVVTDGVWHHIAITRSASGHIRLFVDGQLD CCCCCCEEEECCEEEEEEEECCCCEEEECCEECCCCCEEEEEEEECCCCEEEEEECCCCC GTLSGASGRIDYRLNRITAYPTSDPYLVLGAEKHDVPGSRYYTGWIDDLRVSQSVRYTDN CEECCCCCEEEEEEEEEEECCCCCCEEEEECCCCCCCCCEEEECCHHHHHHCCEEEECCC FTRPSTPHPLDPDTIALYRFDEGAGTFIGDSAPGGISSGELKPRPGGAAQHWSTDTPFSG CCCCCCCCCCCCCCEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GSSPTSTATASITPAMTASSTPGSTATATSTSTATPTGTRTTTPTSTRTATPTGTRTATP CCCCCCCEEEEECCCEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TGTRTTTPTGTRTATPTGTRTTTPTGTRTATPTGTRTALPTPSTTPSVNSAPTTPTPRVR CCCCCCCCCCCEECCCCCCCCCCCCCCEECCCCCCEEECCCCCCCCCCCCCCCCCCCCEE AYIPLITRSHVTSSAQR EEEEEEECCHHHHCCCC >Mature Secondary Structure MECCTSQQWYQTVAKLTLSGLLVTFIAFSTFRASSPTQAQGGYSLRFYGSGTNDLDRVKI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCEEEEE PLGPIDTNGRITASYPINVGDTFTIEFWMKATAAENNAPACPGGWYTGNIILDRDVFGAG ECCCCCCCCEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCEEECCEEEECCCCCCC DYGDYGVAICNQRLVVGVSVGTDDRLLIGSTVVTDGVWHHIAITRSASGHIRLFVDGQLD CCCCCCEEEECCEEEEEEEECCCCEEEECCEECCCCCEEEEEEEECCCCEEEEEECCCCC GTLSGASGRIDYRLNRITAYPTSDPYLVLGAEKHDVPGSRYYTGWIDDLRVSQSVRYTDN CEECCCCCEEEEEEEEEEECCCCCCEEEEECCCCCCCCCEEEECCHHHHHHCCEEEECCC FTRPSTPHPLDPDTIALYRFDEGAGTFIGDSAPGGISSGELKPRPGGAAQHWSTDTPFSG CCCCCCCCCCCCCCEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GSSPTSTATASITPAMTASSTPGSTATATSTSTATPTGTRTTTPTSTRTATPTGTRTATP CCCCCCCEEEEECCCEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TGTRTTTPTGTRTATPTGTRTTTPTGTRTATPTGTRTALPTPSTTPSVNSAPTTPTPRVR CCCCCCCCCCCEECCCCCCCCCCCCCCEECCCCCCEEECCCCCCCCCCCCCCCCCCCCEE AYIPLITRSHVTSSAQR EEEEEEECCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA