Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222527272

Identifier: 222527272

GI number: 222527272

Start: 5014684

End: 5015847

Strand: Direct

Name: 222527272

Synonym: Chy400_4057

Alternate gene names: NA

Gene position: 5014684-5015847 (Clockwise)

Preceding gene: 222527271

Following gene: 222527273

Centisome position: 95.17

GC content: 59.45

Gene sequence:

>1164_bases
ATGCAAACCGCACGGATCGCTGCCGAAACCCGACCTATTGTTGTTGAGCAGCAGGCCAGCAGGCGGATTGTCGCGATTGA
CGCATTACGCGGCATTGCGTTGATTCTGATGGCGCTTGACCACAGTGCCTTCTTCGTTGGCGCAGGGCTTCAGGCCGAGT
CGTATGGCGGACAGCCGGTGGTCTTGCAAAGTGCAGCCTACTGGCTCAGTGGACTACTCACCAACCTGGCGTCACCGATC
TTCTTCTTCCTGGGTGGGTATAGCCTGGCCCTGTATGCCGCAGGGCAAAGCCGACGTGGCAGGCCAGCTTCGGCAACCAC
GCGATTTATCCTTATCCGCGCCCTGATTATTCTGGTGCTCGATCTCACCATCTGTGCCTGGTTTTGGCGCGGTGCAACGC
CCTACGTCCACGTCCTGACCAGCATCGCCACCGCAATGATCCTGCTGGCCGGACTGCGCCATCTACTTTCCCCGCGTCAG
ATCGGGTTCGTTGCCATCATCACCCTCATCATTCATCAAGCATGGATCGGCGCTATCGCCCCGGAACTGGTCAGGAATGA
GCCGCAATCGTTCTGGCAGGCCTTCTGGCTCACCTACAGCTACGACACTCAACCGGCTGTCGGTTTTGCTGTCCTGGGAT
GGGGGCCACTGCTCTGGCTTGGTTACGCAATGGGACACCAGCAAGGGCAAACAGCACACCTGTCATCGCGCCGCTGGTTC
CAGATCGGGACCGGACTCCTCATCGGCTGGCTAATCTTGCGCCTGATCGGAGGGTTCGGCGATCTGGGCGCGTTCAGGGC
GGTCGGCAACACACCAGCGCACTGGCTGGTTATGAGCAAAGCCCCACCCAGCCTGAGTTACTTTGCCTTCAACCTCGGCA
TTGCAGCTCTCATCCTGGCCGCGGCCTACGCCAAACCAGACCTCTTCACAAACGGACTCTTCCGCTGGCTGCCGATGGTT
GGTCAGGTCTCGCTCTTCTTTTACGTGATGCACATTGTCATTTACCACCTGATTGCCCTGGTGATGAGCCAGCTCCCACT
AAGCGGGCCGCGCATCATTTGGGGCTACAGTGCCTGGTTGATGGGTCTCGTGCTCTTGATCCCGCTCGGCTACTGGTATC
GCCGGCAGCGCAAGCGATACCCGCAGGTGCTGGGGTACCTGTAG

Upstream 100 bases:

>100_bases
GCCATTCGCGATAGTGTCGCCGAGATTGCAGGTACGCAGACCAACCCATCTGTTCAGCCGACGCCATAATGCCGTTTTCT
GAACGGTAAGGAGAGAGCGC

Downstream 100 bases:

>100_bases
AGACTGGTCGCATATTGGGCAGGCGAAGATGTTGCCTTCGCCTGCCTGACTGTAAGATGGTTCGGATAGACTCACCGAGA
ACGGGTTGGCTGGAGGTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MQTARIAAETRPIVVEQQASRRIVAIDALRGIALILMALDHSAFFVGAGLQAESYGGQPVVLQSAAYWLSGLLTNLASPI
FFFLGGYSLALYAAGQSRRGRPASATTRFILIRALIILVLDLTICAWFWRGATPYVHVLTSIATAMILLAGLRHLLSPRQ
IGFVAIITLIIHQAWIGAIAPELVRNEPQSFWQAFWLTYSYDTQPAVGFAVLGWGPLLWLGYAMGHQQGQTAHLSSRRWF
QIGTGLLIGWLILRLIGGFGDLGAFRAVGNTPAHWLVMSKAPPSLSYFAFNLGIAALILAAAYAKPDLFTNGLFRWLPMV
GQVSLFFYVMHIVIYHLIALVMSQLPLSGPRIIWGYSAWLMGLVLLIPLGYWYRRQRKRYPQVLGYL

Sequences:

>Translated_387_residues
MQTARIAAETRPIVVEQQASRRIVAIDALRGIALILMALDHSAFFVGAGLQAESYGGQPVVLQSAAYWLSGLLTNLASPI
FFFLGGYSLALYAAGQSRRGRPASATTRFILIRALIILVLDLTICAWFWRGATPYVHVLTSIATAMILLAGLRHLLSPRQ
IGFVAIITLIIHQAWIGAIAPELVRNEPQSFWQAFWLTYSYDTQPAVGFAVLGWGPLLWLGYAMGHQQGQTAHLSSRRWF
QIGTGLLIGWLILRLIGGFGDLGAFRAVGNTPAHWLVMSKAPPSLSYFAFNLGIAALILAAAYAKPDLFTNGLFRWLPMV
GQVSLFFYVMHIVIYHLIALVMSQLPLSGPRIIWGYSAWLMGLVLLIPLGYWYRRQRKRYPQVLGYL
>Mature_387_residues
MQTARIAAETRPIVVEQQASRRIVAIDALRGIALILMALDHSAFFVGAGLQAESYGGQPVVLQSAAYWLSGLLTNLASPI
FFFLGGYSLALYAAGQSRRGRPASATTRFILIRALIILVLDLTICAWFWRGATPYVHVLTSIATAMILLAGLRHLLSPRQ
IGFVAIITLIIHQAWIGAIAPELVRNEPQSFWQAFWLTYSYDTQPAVGFAVLGWGPLLWLGYAMGHQQGQTAHLSSRRWF
QIGTGLLIGWLILRLIGGFGDLGAFRAVGNTPAHWLVMSKAPPSLSYFAFNLGIAALILAAAYAKPDLFTNGLFRWLPMV
GQVSLFFYVMHIVIYHLIALVMSQLPLSGPRIIWGYSAWLMGLVLLIPLGYWYRRQRKRYPQVLGYL

Specific function: Unknown

COG id: COG3503

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42901; Mature: 42901

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: PS00131 CARBOXYPEPT_SER_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTARIAAETRPIVVEQQASRRIVAIDALRGIALILMALDHSAFFVGAGLQAESYGGQPV
CCCCHHHHCCCCEEEECCCCCEEEEHHHHHHHHHHHHHHCCCCEEEECCCEECCCCCCEE
VLQSAAYWLSGLLTNLASPIFFFLGGYSLALYAAGQSRRGRPASATTRFILIRALIILVL
EHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
DLTICAWFWRGATPYVHVLTSIATAMILLAGLRHLLSPRQIGFVAIITLIIHQAWIGAIA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
PELVRNEPQSFWQAFWLTYSYDTQPAVGFAVLGWGPLLWLGYAMGHQQGQTAHLSSRRWF
HHHHHCCHHHHHHHHHHEEECCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCHHCCCCCHH
QIGTGLLIGWLILRLIGGFGDLGAFRAVGNTPAHWLVMSKAPPSLSYFAFNLGIAALILA
HHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
AAYAKPDLFTNGLFRWLPMVGQVSLFFYVMHIVIYHLIALVMSQLPLSGPRIIWGYSAWL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHH
MGLVLLIPLGYWYRRQRKRYPQVLGYL
HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQTARIAAETRPIVVEQQASRRIVAIDALRGIALILMALDHSAFFVGAGLQAESYGGQPV
CCCCHHHHCCCCEEEECCCCCEEEEHHHHHHHHHHHHHHCCCCEEEECCCEECCCCCCEE
VLQSAAYWLSGLLTNLASPIFFFLGGYSLALYAAGQSRRGRPASATTRFILIRALIILVL
EHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
DLTICAWFWRGATPYVHVLTSIATAMILLAGLRHLLSPRQIGFVAIITLIIHQAWIGAIA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
PELVRNEPQSFWQAFWLTYSYDTQPAVGFAVLGWGPLLWLGYAMGHQQGQTAHLSSRRWF
HHHHHCCHHHHHHHHHHEEECCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCHHCCCCCHH
QIGTGLLIGWLILRLIGGFGDLGAFRAVGNTPAHWLVMSKAPPSLSYFAFNLGIAALILA
HHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
AAYAKPDLFTNGLFRWLPMVGQVSLFFYVMHIVIYHLIALVMSQLPLSGPRIIWGYSAWL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHH
MGLVLLIPLGYWYRRQRKRYPQVLGYL
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA