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The map label for this gene is yrhO [H]

Identifier: 222527261

GI number: 222527261

Start: 4996625

End: 4997407

Strand: Direct

Name: yrhO [H]

Synonym: Chy400_4045

Alternate gene names: 222527261

Gene position: 4996625-4997407 (Clockwise)

Preceding gene: 222527260

Following gene: 222527262

Centisome position: 94.83

GC content: 57.47

Gene sequence:

>783_bases
ATGGAGAACACAAATCTACTGGAACAACTGACGGCGCTGGGGCTTACTGAGTACGAGGCACGGGTGTACCTGGCATTGTT
GACCGAGTATCCGGCGACTGGTTATCAGATCAGTAAACTGGCGGGTATTCCACGGTCAATGGTCTATGAGGCGTTAGGGC
GGTTGGAAGGACGTGGTGCTGTGCTCAAATCGGTTGAAGAAAAGGCAACGCTCTACCGTCCGATTTCACCGGCAATCCTG
CTCGACCGCTACGAGCGCGAGGCGCGTGAACGGGCTGAAGCACTGCGCACGCAATTGATGCCACTGTTTCACCACGAAGA
GAGTGATCGGCTCTGGAACTTCAGTGGTCGGCGTGAAGCGCTGGCCGCAGCGCGTGATCTGATCGAGAGCGCTCAGCACG
AGTTGATGCTGGTACTGACCGATGCCGATGTGGAAGCGCTGTATCCGGCATTGGCCGCTGCCCACGAGCGTGGGGTGGCG
TTGGGAGTGATTCTGACCGGTGAAGCGCCCTTTTCGTTTGGGCAGGTTGTGCGCCACCCGAAGCGAGAGACCGAGCTGCA
CGGGATGGTTGAGACGCTGATCGTGGTCGCCGATGAGCGTGAATTCTTGATCGCTTCCGGTCATCTTGCCACGACCGCCA
CGGTGACGACTAACCGCAATATGGTCTTGATTGCGCGCCAGTTTATCTGGATGGAGCTGTTCGCCCAACGTATTTTTGCC
CGTCTTGGCGAAGATTTGCTGGCCCGCCTCGATCCAGAAGATCGCCAGGTTTTGCACTCGTAA

Upstream 100 bases:

>100_bases
TCGTCGTTTTGTGTGTGGATGGTGACCGGCATTTGCAAAGACTCTCTTGACGAATCGCGCGGCGAGCAGTACAATGTTAG
TAGTTCGGAAATGAACAACT

Downstream 100 bases:

>100_bases
TCAATGCCCGGCCCGCCAGTGGAGAGGAGCTATACAAATGATTACGACTTCGCGGGTTACTCCTCGACGGCTGTTTACCC
AATTCTTCCAGGATGAAACC

Product: transcriptional regulator TrmB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MENTNLLEQLTALGLTEYEARVYLALLTEYPATGYQISKLAGIPRSMVYEALGRLEGRGAVLKSVEEKATLYRPISPAIL
LDRYEREARERAEALRTQLMPLFHHEESDRLWNFSGRREALAAARDLIESAQHELMLVLTDADVEALYPALAAAHERGVA
LGVILTGEAPFSFGQVVRHPKRETELHGMVETLIVVADEREFLIASGHLATTATVTTNRNMVLIARQFIWMELFAQRIFA
RLGEDLLARLDPEDRQVLHS

Sequences:

>Translated_260_residues
MENTNLLEQLTALGLTEYEARVYLALLTEYPATGYQISKLAGIPRSMVYEALGRLEGRGAVLKSVEEKATLYRPISPAIL
LDRYEREARERAEALRTQLMPLFHHEESDRLWNFSGRREALAAARDLIESAQHELMLVLTDADVEALYPALAAAHERGVA
LGVILTGEAPFSFGQVVRHPKRETELHGMVETLIVVADEREFLIASGHLATTATVTTNRNMVLIARQFIWMELFAQRIFA
RLGEDLLARLDPEDRQVLHS
>Mature_260_residues
MENTNLLEQLTALGLTEYEARVYLALLTEYPATGYQISKLAGIPRSMVYEALGRLEGRGAVLKSVEEKATLYRPISPAIL
LDRYEREARERAEALRTQLMPLFHHEESDRLWNFSGRREALAAARDLIESAQHELMLVLTDADVEALYPALAAAHERGVA
LGVILTGEAPFSFGQVVRHPKRETELHGMVETLIVVADEREFLIASGHLATTATVTTNRNMVLIARQFIWMELFAQRIFA
RLGEDLLARLDPEDRQVLHS

Specific function: Unknown

COG id: COG1378

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021586
- InterPro:   IPR002831
- InterPro:   IPR011991 [H]

Pfam domain/function: PF11495 Regulator_TrmB; PF01978 TrmB [H]

EC number: NA

Molecular weight: Translated: 29277; Mature: 29277

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENTNLLEQLTALGLTEYEARVYLALLTEYPATGYQISKLAGIPRSMVYEALGRLEGRGA
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEHHHHHCCCHHHHHHHHHCCCCCHH
VLKSVEEKATLYRPISPAILLDRYEREARERAEALRTQLMPLFHHEESDRLWNFSGRREA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHH
LAAARDLIESAQHELMLVLTDADVEALYPALAAAHERGVALGVILTGEAPFSFGQVVRHP
HHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHCC
KRETELHGMVETLIVVADEREFLIASGHLATTATVTTNRNMVLIARQFIWMELFAQRIFA
CHHHHHHHHHHHHHEEECCCCEEEECCCEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHH
RLGEDLLARLDPEDRQVLHS
HHHHHHHHHCCCHHHHHHCC
>Mature Secondary Structure
MENTNLLEQLTALGLTEYEARVYLALLTEYPATGYQISKLAGIPRSMVYEALGRLEGRGA
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEHHHHHCCCHHHHHHHHHCCCCCHH
VLKSVEEKATLYRPISPAILLDRYEREARERAEALRTQLMPLFHHEESDRLWNFSGRREA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHH
LAAARDLIESAQHELMLVLTDADVEALYPALAAAHERGVALGVILTGEAPFSFGQVVRHP
HHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHCC
KRETELHGMVETLIVVADEREFLIASGHLATTATVTTNRNMVLIARQFIWMELFAQRIFA
CHHHHHHHHHHHHHEEECCCCEEEECCCEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHH
RLGEDLLARLDPEDRQVLHS
HHHHHHHHHCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]