| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527259
Identifier: 222527259
GI number: 222527259
Start: 4991904
End: 4993343
Strand: Reverse
Name: 222527259
Synonym: Chy400_4043
Alternate gene names: NA
Gene position: 4993343-4991904 (Counterclockwise)
Preceding gene: 222527263
Following gene: 222527256
Centisome position: 94.77
GC content: 68.75
Gene sequence:
>1440_bases ATGCCCAGGAAGCAGGCCCCTCCCCCTCAGGCCCCTGTCTCGATGTTACTCGCCACCCTGATGCAGATTATCACGGCCCA CCGCCCGGCGTTTCGTCAGGAGCGGACCTTCCGGCGGGCCGTGGCGCTGCTGGTTGGCGAGCTGTTTGCGTTTGCCAGAC ACACCGTCACCCAGGTGCTGCTGGCACTCGGCATGCACGACACGGACGGGACGGCGTTCTACCGCCTGTTCAGTCGGTCA CGGTTTGACGAAGCGACCCTGACCGCGTGTCTCTGCCGCGAGACACTGAAGCGGTGTTCCAAGCACGATCCGTATGTGAT CGGGATCGATAGCACGCAGATTCCACGGAGCAGCCTGACCCTTCCCGGCACAAGTTGGTTGCACGCACTCCGCACGGCCG TGGTCACGCGCGGTATCCATCGTGCCCAACGGTTTGTCCACTGCGCCTGGCTGCCACCACGGGTGAAGGGGTTTACCCGG GCGATCCCCCTGCGCTTCCTGCCGGCGTTTCCGCCCAAGGCCGCGCCGGCAGACGTGCCATCGGCGAACGAATGGGAGGG TGGATTGGCGTGCATCAGGTGGGTGCGGCAGCAGCTCACGGCGGCCGGCCGCGCTGCGCAGTGGGTGGTGGTGCTGGCTG ATGGCGCGTGTGCCACCGTGGGGATGTGGCGCGGGGTGCCGGCGCAGGTGGCACTGATCGTGCGCACGGCCCGCAATCGC TGTCGGTCGCTGCTGCCGCCGCCGCCGACGGGCCGCGGTCGGCCGCGGCGATACGGGAAGCGTGCTCCGCAGCCCGCGAG CTGGCTCACCAAGCAGGAGCTGTTCCGGCGGAAACGGGTGCTGGTGCGGGGGCGACGGATTGCGATGCGCTATCAGGTCC ACGGGCCATACCTGTGCGACGGGGTGCCTGACCACGCGGTCGTCCTGATCGTGGTTGGTGGTGCGACCTGGCAGCGAGGG AAGCGCCGTCCGCGCCTGGGACGGCGTGAGCCGGCCTGCTCGCTGGTCACGGCGGTGCAAACGGACACGGACTGGGTGGT ACCCCTGTCCGTCGGGCAGATCCTGGCCTGGGTCTGGCAACGCTGGGAACGGGAGGTCGCTCATCGCGAGCTGAACGCCG GCGTTGGGGTCGGTCAGAACCAGTGCTGGAACAAGCGGTCAGCGGTGGTCAGTGGGCCGTGGCGTGGCTGGGTCTACGCA GTGCTGGTGCTGGCCGGCTACCGTGCGTGGGGATGGATCCGTGGTCCCACCCGACCAGAACGCTGGTGGCGGGGCGCACA GCGGTGGCGGTTCACCACGTTGTGGCGCAGCGACCGGGCCGCCCTGTGGGGCACGGCGGCATGTCGGTCGCTTTGGACGA CGTCCACGGACGATTGGCTGAACAAAGAGCACACGATCATCGCCCTGACCAACGCCGCACGCGCGGCGGCCAGGGCGTAG
Upstream 100 bases:
>100_bases GGACTTTGGCCCTTTCTGGGAGGGACGTGCCATGCGGGTACCAGCATGGTATATGGTATCCTATACGGTTATGACCACGA CGAGCAGCCAGGAGGCACCC
Downstream 100 bases:
>100_bases GGGGGTCTAGCGGCCTTCTACCCCCCAAATGACCCATCCATCAGCACGCAACCGAGAGTCACCAGCATCTGCTCCCGACT CTCGTCATCCCTCCTGCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 479; Mature: 478
Protein sequence:
>479_residues MPRKQAPPPQAPVSMLLATLMQIITAHRPAFRQERTFRRAVALLVGELFAFARHTVTQVLLALGMHDTDGTAFYRLFSRS RFDEATLTACLCRETLKRCSKHDPYVIGIDSTQIPRSSLTLPGTSWLHALRTAVVTRGIHRAQRFVHCAWLPPRVKGFTR AIPLRFLPAFPPKAAPADVPSANEWEGGLACIRWVRQQLTAAGRAAQWVVVLADGACATVGMWRGVPAQVALIVRTARNR CRSLLPPPPTGRGRPRRYGKRAPQPASWLTKQELFRRKRVLVRGRRIAMRYQVHGPYLCDGVPDHAVVLIVVGGATWQRG KRRPRLGRREPACSLVTAVQTDTDWVVPLSVGQILAWVWQRWEREVAHRELNAGVGVGQNQCWNKRSAVVSGPWRGWVYA VLVLAGYRAWGWIRGPTRPERWWRGAQRWRFTTLWRSDRAALWGTAACRSLWTTSTDDWLNKEHTIIALTNAARAAARA
Sequences:
>Translated_479_residues MPRKQAPPPQAPVSMLLATLMQIITAHRPAFRQERTFRRAVALLVGELFAFARHTVTQVLLALGMHDTDGTAFYRLFSRS RFDEATLTACLCRETLKRCSKHDPYVIGIDSTQIPRSSLTLPGTSWLHALRTAVVTRGIHRAQRFVHCAWLPPRVKGFTR AIPLRFLPAFPPKAAPADVPSANEWEGGLACIRWVRQQLTAAGRAAQWVVVLADGACATVGMWRGVPAQVALIVRTARNR CRSLLPPPPTGRGRPRRYGKRAPQPASWLTKQELFRRKRVLVRGRRIAMRYQVHGPYLCDGVPDHAVVLIVVGGATWQRG KRRPRLGRREPACSLVTAVQTDTDWVVPLSVGQILAWVWQRWEREVAHRELNAGVGVGQNQCWNKRSAVVSGPWRGWVYA VLVLAGYRAWGWIRGPTRPERWWRGAQRWRFTTLWRSDRAALWGTAACRSLWTTSTDDWLNKEHTIIALTNAARAAARA >Mature_478_residues PRKQAPPPQAPVSMLLATLMQIITAHRPAFRQERTFRRAVALLVGELFAFARHTVTQVLLALGMHDTDGTAFYRLFSRSR FDEATLTACLCRETLKRCSKHDPYVIGIDSTQIPRSSLTLPGTSWLHALRTAVVTRGIHRAQRFVHCAWLPPRVKGFTRA IPLRFLPAFPPKAAPADVPSANEWEGGLACIRWVRQQLTAAGRAAQWVVVLADGACATVGMWRGVPAQVALIVRTARNRC RSLLPPPPTGRGRPRRYGKRAPQPASWLTKQELFRRKRVLVRGRRIAMRYQVHGPYLCDGVPDHAVVLIVVGGATWQRGK RRPRLGRREPACSLVTAVQTDTDWVVPLSVGQILAWVWQRWEREVAHRELNAGVGVGQNQCWNKRSAVVSGPWRGWVYAV LVLAGYRAWGWIRGPTRPERWWRGAQRWRFTTLWRSDRAALWGTAACRSLWTTSTDDWLNKEHTIIALTNAARAAARA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54044; Mature: 53913
Theoretical pI: Translated: 12.09; Mature: 12.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRKQAPPPQAPVSMLLATLMQIITAHRPAFRQERTFRRAVALLVGELFAFARHTVTQVL CCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LALGMHDTDGTAFYRLFSRSRFDEATLTACLCRETLKRCSKHDPYVIGIDSTQIPRSSLT HHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCC LPGTSWLHALRTAVVTRGIHRAQRFVHCAWLPPRVKGFTRAIPLRFLPAFPPKAAPADVP CCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHCCHHHCCCCCCCCCCCCCC SANEWEGGLACIRWVRQQLTAAGRAAQWVVVLADGACATVGMWRGVPAQVALIVRTARNR CCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHH CRSLLPPPPTGRGRPRRYGKRAPQPASWLTKQELFRRKRVLVRGRRIAMRYQVHGPYLCD HHHCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEC GVPDHAVVLIVVGGATWQRGKRRPRLGRREPACSLVTAVQTDTDWVVPLSVGQILAWVWQ CCCCCEEEEEEECCCCHHCCCCCCCCCCCCCHHHHHHHEECCCCEEEEHHHHHHHHHHHH RWEREVAHRELNAGVGVGQNQCWNKRSAVVSGPWRGWVYAVLVLAGYRAWGWIRGPTRPE HHHHHHHHHHHHCCCCCCCHHCCCCCCCEECCCHHHHHHHHHHHHHHHHCEEECCCCCHH RWWRGAQRWRFTTLWRSDRAALWGTAACRSLWTTSTDDWLNKEHTIIALTNAARAAARA HHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHCCCCCEEEEEECHHHHHHCC >Mature Secondary Structure PRKQAPPPQAPVSMLLATLMQIITAHRPAFRQERTFRRAVALLVGELFAFARHTVTQVL CCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LALGMHDTDGTAFYRLFSRSRFDEATLTACLCRETLKRCSKHDPYVIGIDSTQIPRSSLT HHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCC LPGTSWLHALRTAVVTRGIHRAQRFVHCAWLPPRVKGFTRAIPLRFLPAFPPKAAPADVP CCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHCCHHHCCCCCCCCCCCCCC SANEWEGGLACIRWVRQQLTAAGRAAQWVVVLADGACATVGMWRGVPAQVALIVRTARNR CCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHH CRSLLPPPPTGRGRPRRYGKRAPQPASWLTKQELFRRKRVLVRGRRIAMRYQVHGPYLCD HHHCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEC GVPDHAVVLIVVGGATWQRGKRRPRLGRREPACSLVTAVQTDTDWVVPLSVGQILAWVWQ CCCCCEEEEEEECCCCHHCCCCCCCCCCCCCHHHHHHHEECCCCEEEEHHHHHHHHHHHH RWEREVAHRELNAGVGVGQNQCWNKRSAVVSGPWRGWVYAVLVLAGYRAWGWIRGPTRPE HHHHHHHHHHHHCCCCCCCHHCCCCCCCEECCCHHHHHHHHHHHHHHHHCEEECCCCCHH RWWRGAQRWRFTTLWRSDRAALWGTAACRSLWTTSTDDWLNKEHTIIALTNAARAAARA HHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHCCCCCEEEEEECHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA