Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222527259

Identifier: 222527259

GI number: 222527259

Start: 4991904

End: 4993343

Strand: Reverse

Name: 222527259

Synonym: Chy400_4043

Alternate gene names: NA

Gene position: 4993343-4991904 (Counterclockwise)

Preceding gene: 222527263

Following gene: 222527256

Centisome position: 94.77

GC content: 68.75

Gene sequence:

>1440_bases
ATGCCCAGGAAGCAGGCCCCTCCCCCTCAGGCCCCTGTCTCGATGTTACTCGCCACCCTGATGCAGATTATCACGGCCCA
CCGCCCGGCGTTTCGTCAGGAGCGGACCTTCCGGCGGGCCGTGGCGCTGCTGGTTGGCGAGCTGTTTGCGTTTGCCAGAC
ACACCGTCACCCAGGTGCTGCTGGCACTCGGCATGCACGACACGGACGGGACGGCGTTCTACCGCCTGTTCAGTCGGTCA
CGGTTTGACGAAGCGACCCTGACCGCGTGTCTCTGCCGCGAGACACTGAAGCGGTGTTCCAAGCACGATCCGTATGTGAT
CGGGATCGATAGCACGCAGATTCCACGGAGCAGCCTGACCCTTCCCGGCACAAGTTGGTTGCACGCACTCCGCACGGCCG
TGGTCACGCGCGGTATCCATCGTGCCCAACGGTTTGTCCACTGCGCCTGGCTGCCACCACGGGTGAAGGGGTTTACCCGG
GCGATCCCCCTGCGCTTCCTGCCGGCGTTTCCGCCCAAGGCCGCGCCGGCAGACGTGCCATCGGCGAACGAATGGGAGGG
TGGATTGGCGTGCATCAGGTGGGTGCGGCAGCAGCTCACGGCGGCCGGCCGCGCTGCGCAGTGGGTGGTGGTGCTGGCTG
ATGGCGCGTGTGCCACCGTGGGGATGTGGCGCGGGGTGCCGGCGCAGGTGGCACTGATCGTGCGCACGGCCCGCAATCGC
TGTCGGTCGCTGCTGCCGCCGCCGCCGACGGGCCGCGGTCGGCCGCGGCGATACGGGAAGCGTGCTCCGCAGCCCGCGAG
CTGGCTCACCAAGCAGGAGCTGTTCCGGCGGAAACGGGTGCTGGTGCGGGGGCGACGGATTGCGATGCGCTATCAGGTCC
ACGGGCCATACCTGTGCGACGGGGTGCCTGACCACGCGGTCGTCCTGATCGTGGTTGGTGGTGCGACCTGGCAGCGAGGG
AAGCGCCGTCCGCGCCTGGGACGGCGTGAGCCGGCCTGCTCGCTGGTCACGGCGGTGCAAACGGACACGGACTGGGTGGT
ACCCCTGTCCGTCGGGCAGATCCTGGCCTGGGTCTGGCAACGCTGGGAACGGGAGGTCGCTCATCGCGAGCTGAACGCCG
GCGTTGGGGTCGGTCAGAACCAGTGCTGGAACAAGCGGTCAGCGGTGGTCAGTGGGCCGTGGCGTGGCTGGGTCTACGCA
GTGCTGGTGCTGGCCGGCTACCGTGCGTGGGGATGGATCCGTGGTCCCACCCGACCAGAACGCTGGTGGCGGGGCGCACA
GCGGTGGCGGTTCACCACGTTGTGGCGCAGCGACCGGGCCGCCCTGTGGGGCACGGCGGCATGTCGGTCGCTTTGGACGA
CGTCCACGGACGATTGGCTGAACAAAGAGCACACGATCATCGCCCTGACCAACGCCGCACGCGCGGCGGCCAGGGCGTAG

Upstream 100 bases:

>100_bases
GGACTTTGGCCCTTTCTGGGAGGGACGTGCCATGCGGGTACCAGCATGGTATATGGTATCCTATACGGTTATGACCACGA
CGAGCAGCCAGGAGGCACCC

Downstream 100 bases:

>100_bases
GGGGGTCTAGCGGCCTTCTACCCCCCAAATGACCCATCCATCAGCACGCAACCGAGAGTCACCAGCATCTGCTCCCGACT
CTCGTCATCCCTCCTGCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 479; Mature: 478

Protein sequence:

>479_residues
MPRKQAPPPQAPVSMLLATLMQIITAHRPAFRQERTFRRAVALLVGELFAFARHTVTQVLLALGMHDTDGTAFYRLFSRS
RFDEATLTACLCRETLKRCSKHDPYVIGIDSTQIPRSSLTLPGTSWLHALRTAVVTRGIHRAQRFVHCAWLPPRVKGFTR
AIPLRFLPAFPPKAAPADVPSANEWEGGLACIRWVRQQLTAAGRAAQWVVVLADGACATVGMWRGVPAQVALIVRTARNR
CRSLLPPPPTGRGRPRRYGKRAPQPASWLTKQELFRRKRVLVRGRRIAMRYQVHGPYLCDGVPDHAVVLIVVGGATWQRG
KRRPRLGRREPACSLVTAVQTDTDWVVPLSVGQILAWVWQRWEREVAHRELNAGVGVGQNQCWNKRSAVVSGPWRGWVYA
VLVLAGYRAWGWIRGPTRPERWWRGAQRWRFTTLWRSDRAALWGTAACRSLWTTSTDDWLNKEHTIIALTNAARAAARA

Sequences:

>Translated_479_residues
MPRKQAPPPQAPVSMLLATLMQIITAHRPAFRQERTFRRAVALLVGELFAFARHTVTQVLLALGMHDTDGTAFYRLFSRS
RFDEATLTACLCRETLKRCSKHDPYVIGIDSTQIPRSSLTLPGTSWLHALRTAVVTRGIHRAQRFVHCAWLPPRVKGFTR
AIPLRFLPAFPPKAAPADVPSANEWEGGLACIRWVRQQLTAAGRAAQWVVVLADGACATVGMWRGVPAQVALIVRTARNR
CRSLLPPPPTGRGRPRRYGKRAPQPASWLTKQELFRRKRVLVRGRRIAMRYQVHGPYLCDGVPDHAVVLIVVGGATWQRG
KRRPRLGRREPACSLVTAVQTDTDWVVPLSVGQILAWVWQRWEREVAHRELNAGVGVGQNQCWNKRSAVVSGPWRGWVYA
VLVLAGYRAWGWIRGPTRPERWWRGAQRWRFTTLWRSDRAALWGTAACRSLWTTSTDDWLNKEHTIIALTNAARAAARA
>Mature_478_residues
PRKQAPPPQAPVSMLLATLMQIITAHRPAFRQERTFRRAVALLVGELFAFARHTVTQVLLALGMHDTDGTAFYRLFSRSR
FDEATLTACLCRETLKRCSKHDPYVIGIDSTQIPRSSLTLPGTSWLHALRTAVVTRGIHRAQRFVHCAWLPPRVKGFTRA
IPLRFLPAFPPKAAPADVPSANEWEGGLACIRWVRQQLTAAGRAAQWVVVLADGACATVGMWRGVPAQVALIVRTARNRC
RSLLPPPPTGRGRPRRYGKRAPQPASWLTKQELFRRKRVLVRGRRIAMRYQVHGPYLCDGVPDHAVVLIVVGGATWQRGK
RRPRLGRREPACSLVTAVQTDTDWVVPLSVGQILAWVWQRWEREVAHRELNAGVGVGQNQCWNKRSAVVSGPWRGWVYAV
LVLAGYRAWGWIRGPTRPERWWRGAQRWRFTTLWRSDRAALWGTAACRSLWTTSTDDWLNKEHTIIALTNAARAAARA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54044; Mature: 53913

Theoretical pI: Translated: 12.09; Mature: 12.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRKQAPPPQAPVSMLLATLMQIITAHRPAFRQERTFRRAVALLVGELFAFARHTVTQVL
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LALGMHDTDGTAFYRLFSRSRFDEATLTACLCRETLKRCSKHDPYVIGIDSTQIPRSSLT
HHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCC
LPGTSWLHALRTAVVTRGIHRAQRFVHCAWLPPRVKGFTRAIPLRFLPAFPPKAAPADVP
CCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHCCHHHCCCCCCCCCCCCCC
SANEWEGGLACIRWVRQQLTAAGRAAQWVVVLADGACATVGMWRGVPAQVALIVRTARNR
CCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHH
CRSLLPPPPTGRGRPRRYGKRAPQPASWLTKQELFRRKRVLVRGRRIAMRYQVHGPYLCD
HHHCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEC
GVPDHAVVLIVVGGATWQRGKRRPRLGRREPACSLVTAVQTDTDWVVPLSVGQILAWVWQ
CCCCCEEEEEEECCCCHHCCCCCCCCCCCCCHHHHHHHEECCCCEEEEHHHHHHHHHHHH
RWEREVAHRELNAGVGVGQNQCWNKRSAVVSGPWRGWVYAVLVLAGYRAWGWIRGPTRPE
HHHHHHHHHHHHCCCCCCCHHCCCCCCCEECCCHHHHHHHHHHHHHHHHCEEECCCCCHH
RWWRGAQRWRFTTLWRSDRAALWGTAACRSLWTTSTDDWLNKEHTIIALTNAARAAARA
HHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHCCCCCEEEEEECHHHHHHCC
>Mature Secondary Structure 
PRKQAPPPQAPVSMLLATLMQIITAHRPAFRQERTFRRAVALLVGELFAFARHTVTQVL
CCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LALGMHDTDGTAFYRLFSRSRFDEATLTACLCRETLKRCSKHDPYVIGIDSTQIPRSSLT
HHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCC
LPGTSWLHALRTAVVTRGIHRAQRFVHCAWLPPRVKGFTRAIPLRFLPAFPPKAAPADVP
CCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHCCHHHCCCCCCCCCCCCCC
SANEWEGGLACIRWVRQQLTAAGRAAQWVVVLADGACATVGMWRGVPAQVALIVRTARNR
CCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHH
CRSLLPPPPTGRGRPRRYGKRAPQPASWLTKQELFRRKRVLVRGRRIAMRYQVHGPYLCD
HHHCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEC
GVPDHAVVLIVVGGATWQRGKRRPRLGRREPACSLVTAVQTDTDWVVPLSVGQILAWVWQ
CCCCCEEEEEEECCCCHHCCCCCCCCCCCCCHHHHHHHEECCCCEEEEHHHHHHHHHHHH
RWEREVAHRELNAGVGVGQNQCWNKRSAVVSGPWRGWVYAVLVLAGYRAWGWIRGPTRPE
HHHHHHHHHHHHCCCCCCCHHCCCCCCCEECCCHHHHHHHHHHHHHHHHCEEECCCCCHH
RWWRGAQRWRFTTLWRSDRAALWGTAACRSLWTTSTDDWLNKEHTIIALTNAARAAARA
HHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHCCCCCEEEEEECHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA