Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222527258

Identifier: 222527258

GI number: 222527258

Start: 4990650

End: 4991534

Strand: Direct

Name: 222527258

Synonym: Chy400_4042

Alternate gene names: NA

Gene position: 4990650-4991534 (Clockwise)

Preceding gene: 222527257

Following gene: 222527260

Centisome position: 94.72

GC content: 58.76

Gene sequence:

>885_bases
ATGCACGACTCTGACCGCGAACATGAACAATCTCTCCTCGCCGCAGCCGCGCTCGGCAGCCTCGATCCCACCGATCTGGC
AGCGTTCGAGCAGGTGCTGGCCAGCTCACCCGCTGCCCGATCTGAATTCGAGCAGTTGCGCGAGGTAGTTGCTTTGTTGC
CTTATGCAGCACCACCGGTTACGCCACCGGACCATGTCCGCACCCGCCTGATGGAGCGTATCGCCGCCGACCAGGCTGCA
CAGGCGCCGCCGCGACAGACACGGTCTTCGCGCCGCATTAGCACCGGCTGGGTAACACCACTGATACTGGTTGGTCTAAC
CCTGGTGATTACGTTGCTGGGCAGTCTGACGTTGTCATTACAACAACAGGTGATAGCCTTAAACGAGACAAATCAGCAAC
TACTGGCTGCGGTGAATAACCTCCAGGCAGCGGTGAATGCCAGCGAAGAACGACAATCTCAAATGACGGCACAACTGGCA
ACTTACGAGCAGCAGTTGGCACGTTTGAACGATCAGGTTGCCCAGGAGCGCTTATTGGTTTCGTTCGTGAGCGCACCTGG
GGTGGCGACCCGTGAGCTGCTGCCAACACGGGCCGACGTTACGGCTCGCGGTGAGATGTACATGTATCCAGGTGAAACGC
AGGCGGTGGTTGTGTTCAGCGGATTGCCGGCGCTCGAACCAGATCGGGTCTACCGCTTCTGGCTCAGTGATGGCACACAA
CGCATTGCTGCCGGCTCGTTTCAAGTCGATGCCACCGGTCTGGCGACGTTGATGGTTACGGCACCGCGCGAGGTGAATGC
TTACACCGAAGTGATGTTGACGGTAGAGCCTGCTACCGGTACTGCACCGGGTGATGTCGAGGTTATTCTCACCGGGACGT
TGTGA

Upstream 100 bases:

>100_bases
TGGCACAATTAAGACGAGAATTCGTTTAGGTTTACAGAAGTTGAAACAGACCTTGCTTCACTACGGCATCGATGCAAACG
ACCACTAGAAGAGTAGCTGC

Downstream 100 bases:

>100_bases
TGGTGGCAGGAACGGGCGCTTTCAGATAAACACGTTCATCCTCTGGGAACGCGAGCATCAGGCTCGCGTTTTGGTTTATA
ACCAGGATGTGATGTTTTCA

Product: putative transmembrane anti-sigma factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MHDSDREHEQSLLAAAALGSLDPTDLAAFEQVLASSPAARSEFEQLREVVALLPYAAPPVTPPDHVRTRLMERIAADQAA
QAPPRQTRSSRRISTGWVTPLILVGLTLVITLLGSLTLSLQQQVIALNETNQQLLAAVNNLQAAVNASEERQSQMTAQLA
TYEQQLARLNDQVAQERLLVSFVSAPGVATRELLPTRADVTARGEMYMYPGETQAVVVFSGLPALEPDRVYRFWLSDGTQ
RIAAGSFQVDATGLATLMVTAPREVNAYTEVMLTVEPATGTAPGDVEVILTGTL

Sequences:

>Translated_294_residues
MHDSDREHEQSLLAAAALGSLDPTDLAAFEQVLASSPAARSEFEQLREVVALLPYAAPPVTPPDHVRTRLMERIAADQAA
QAPPRQTRSSRRISTGWVTPLILVGLTLVITLLGSLTLSLQQQVIALNETNQQLLAAVNNLQAAVNASEERQSQMTAQLA
TYEQQLARLNDQVAQERLLVSFVSAPGVATRELLPTRADVTARGEMYMYPGETQAVVVFSGLPALEPDRVYRFWLSDGTQ
RIAAGSFQVDATGLATLMVTAPREVNAYTEVMLTVEPATGTAPGDVEVILTGTL
>Mature_294_residues
MHDSDREHEQSLLAAAALGSLDPTDLAAFEQVLASSPAARSEFEQLREVVALLPYAAPPVTPPDHVRTRLMERIAADQAA
QAPPRQTRSSRRISTGWVTPLILVGLTLVITLLGSLTLSLQQQVIALNETNQQLLAAVNNLQAAVNASEERQSQMTAQLA
TYEQQLARLNDQVAQERLLVSFVSAPGVATRELLPTRADVTARGEMYMYPGETQAVVVFSGLPALEPDRVYRFWLSDGTQ
RIAAGSFQVDATGLATLMVTAPREVNAYTEVMLTVEPATGTAPGDVEVILTGTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31713; Mature: 31713

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDSDREHEQSLLAAAALGSLDPTDLAAFEQVLASSPAARSEFEQLREVVALLPYAAPPV
CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC
TPPDHVRTRLMERIAADQAAQAPPRQTRSSRRISTGWVTPLILVGLTLVITLLGSLTLSL
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QQQVIALNETNQQLLAAVNNLQAAVNASEERQSQMTAQLATYEQQLARLNDQVAQERLLV
HHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFVSAPGVATRELLPTRADVTARGEMYMYPGETQAVVVFSGLPALEPDRVYRFWLSDGTQ
HHHHCCCCHHHHHCCCCCCCEECCCEEEECCCCCEEEEEECCCCCCCCCEEEEECCCCCH
RIAAGSFQVDATGLATLMVTAPREVNAYTEVMLTVEPATGTAPGDVEVILTGTL
HHCCCCEEECCCCCEEEEEECCCHHCCEEEEEEEEECCCCCCCCCEEEEEECCC
>Mature Secondary Structure
MHDSDREHEQSLLAAAALGSLDPTDLAAFEQVLASSPAARSEFEQLREVVALLPYAAPPV
CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC
TPPDHVRTRLMERIAADQAAQAPPRQTRSSRRISTGWVTPLILVGLTLVITLLGSLTLSL
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QQQVIALNETNQQLLAAVNNLQAAVNASEERQSQMTAQLATYEQQLARLNDQVAQERLLV
HHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFVSAPGVATRELLPTRADVTARGEMYMYPGETQAVVVFSGLPALEPDRVYRFWLSDGTQ
HHHHCCCCHHHHHCCCCCCCEECCCEEEECCCCCEEEEEECCCCCCCCCEEEEECCCCCH
RIAAGSFQVDATGLATLMVTAPREVNAYTEVMLTVEPATGTAPGDVEVILTGTL
HHCCCCEEECCCCCEEEEEECCCHHCCEEEEEEEEECCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA