Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222527219

Identifier: 222527219

GI number: 222527219

Start: 4947010

End: 4947396

Strand: Reverse

Name: 222527219

Synonym: Chy400_4003

Alternate gene names: NA

Gene position: 4947396-4947010 (Counterclockwise)

Preceding gene: 222527221

Following gene: 222527215

Centisome position: 93.9

GC content: 59.69

Gene sequence:

>387_bases
ATGGACAAAGACACCCTCATTCGTGAACTCGGCGCGGCCATCATCGCTCATCCAAAGGTTGCCGCACTGCCGTGGCAGCG
CTACGCGCTGGTGGCACGGATTGATGCGCAGCAGAGCAGCCTGCACGGTTTCGCTTTCGATGCTGATGGTGGTTATCAGA
TGGCGACACCGACGGGGCTTGCGATACACGATAAACTCAGAGCACTGCGTGAGGCGATGCACGTCGCCGGTGAAACGCCC
TGGGGCGCATGCGTGGTGCGTCTTGTGCGGGCCACGCAACGGATCACGGTTGAGTTTGAGTACGATCATCCTGAGCGCTG
GTCTGTTACGCCGCAGCGTGTGGCCGAGATCGCCGTTCGTTTAGCGGATGATCATGCTTTCTGGTAG

Upstream 100 bases:

>100_bases
GACGCACGCCGATCAGCCCTGAGATGTCGGATCAGGTGTGGTATGCTGATAGGCGTAATCTTCCGTACCTGGCCTGGAGA
ACGGCGTAGAAAGATGGGGC

Downstream 100 bases:

>100_bases
ACGGCGTCGTGATCCTGGTCGTTGCCAGACGGACGTGCGCTGTCGCTGCCGCTGTTTCTGCCTTTCCGGCGTGCAACGTG
GAGGTAAAACCACATCGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MDKDTLIRELGAAIIAHPKVAALPWQRYALVARIDAQQSSLHGFAFDADGGYQMATPTGLAIHDKLRALREAMHVAGETP
WGACVVRLVRATQRITVEFEYDHPERWSVTPQRVAEIAVRLADDHAFW

Sequences:

>Translated_128_residues
MDKDTLIRELGAAIIAHPKVAALPWQRYALVARIDAQQSSLHGFAFDADGGYQMATPTGLAIHDKLRALREAMHVAGETP
WGACVVRLVRATQRITVEFEYDHPERWSVTPQRVAEIAVRLADDHAFW
>Mature_128_residues
MDKDTLIRELGAAIIAHPKVAALPWQRYALVARIDAQQSSLHGFAFDADGGYQMATPTGLAIHDKLRALREAMHVAGETP
WGACVVRLVRATQRITVEFEYDHPERWSVTPQRVAEIAVRLADDHAFW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14330; Mature: 14330

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKDTLIRELGAAIIAHPKVAALPWQRYALVARIDAQQSSLHGFAFDADGGYQMATPTGL
CCHHHHHHHHHHHHHCCCCCCCCCHHHHHEEHEECCCCCCCCCEEEECCCCEEECCCCCC
AIHDKLRALREAMHVAGETPWGACVVRLVRATQRITVEFEYDHPERWSVTPQRVAEIAVR
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEEEECCCCCCCCCCHHHHHHHHHH
LADDHAFW
HCCCCCCC
>Mature Secondary Structure
MDKDTLIRELGAAIIAHPKVAALPWQRYALVARIDAQQSSLHGFAFDADGGYQMATPTGL
CCHHHHHHHHHHHHHCCCCCCCCCHHHHHEEHEECCCCCCCCCEEEECCCCEEECCCCCC
AIHDKLRALREAMHVAGETPWGACVVRLVRATQRITVEFEYDHPERWSVTPQRVAEIAVR
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEEEECCCCCCCCCCHHHHHHHHHH
LADDHAFW
HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA