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The map label for this gene is nudC [H]

Identifier: 222527188

GI number: 222527188

Start: 4921638

End: 4922147

Strand: Reverse

Name: nudC [H]

Synonym: Chy400_3970

Alternate gene names: 222527188

Gene position: 4922147-4921638 (Counterclockwise)

Preceding gene: 222527210

Following gene: 222527184

Centisome position: 93.42

GC content: 57.65

Gene sequence:

>510_bases
ATGTATCGCCAACATTCGTTCTGTTCATTTTGCGGTCACCCCTTCGCCGAGCATCAGCCATGGCCACGATTGTGTGCCAA
CTGTGGAAGCACAACCTATCGCAACCCCTTACCGGTTGTGTTATTGTTGCAGCCGGTTGATGATGGCCTGCTCCTGATTC
GACGCGCTGCCTATCCACGGCGTGGGCAATTAGCACTGCCGGGTGGGTTTATCGAGATGGGTGAGCGCTGGCAGGATGCG
GCTGCGCGCGAGCTGCACGAAGAAGCCGGGGTTGAGGTTGATCCGGCATTGATCAGCGATTTTGCGGTACGCAGCACCTC
TGACGGCTATTTGCTGGTATTTGGGTTGGGGCCACTGTTGCGGAGTGAGGATTTGCCCCGCTTTCTGCCAAACAGTGAAG
CTGCGGAACGGGTGATTGTCACTGCGCCGATTGAGCTGGCCTTCCCGCTGCATACCGAGATGGTTGCGCGCTTCTTTACG
CAGCTCCGGCAGTGGCGTCCTCTTACCTGA

Upstream 100 bases:

>100_bases
CTCGTGGTATCAAGTGGGTGAATCCGCAATGCGCAAGGGGGACTGTTTTATGTTATACTACAGTCCTTGCTGGAATTGTT
AATCGTCGCTTTAGAGACAC

Downstream 100 bases:

>100_bases
TTCCTATCGCAAACCGAATTCATACAGACGGTGCTGATCGGCAAGCAGGGTTGTCGTCGCTTCATCGGCGACGATCTGCC
CATCGGCCATGACAATCGCA

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MYRQHSFCSFCGHPFAEHQPWPRLCANCGSTTYRNPLPVVLLLQPVDDGLLLIRRAAYPRRGQLALPGGFIEMGERWQDA
AARELHEEAGVEVDPALISDFAVRSTSDGYLLVFGLGPLLRSEDLPRFLPNSEAAERVIVTAPIELAFPLHTEMVARFFT
QLRQWRPLT

Sequences:

>Translated_169_residues
MYRQHSFCSFCGHPFAEHQPWPRLCANCGSTTYRNPLPVVLLLQPVDDGLLLIRRAAYPRRGQLALPGGFIEMGERWQDA
AARELHEEAGVEVDPALISDFAVRSTSDGYLLVFGLGPLLRSEDLPRFLPNSEAAERVIVTAPIELAFPLHTEMVARFFT
QLRQWRPLT
>Mature_169_residues
MYRQHSFCSFCGHPFAEHQPWPRLCANCGSTTYRNPLPVVLLLQPVDDGLLLIRRAAYPRRGQLALPGGFIEMGERWQDA
AARELHEEAGVEVDPALISDFAVRSTSDGYLLVFGLGPLLRSEDLPRFLPNSEAAERVIVTAPIELAFPLHTEMVARFFT
QLRQWRPLT

Specific function: Unknown

COG id: COG2816

COG function: function code L; NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI48994995, Length=93, Percent_Identity=34.4086021505376, Blast_Score=66, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015375
- InterPro:   IPR022925
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR015376 [H]

Pfam domain/function: PF00293 NUDIX; PF09296 NUDIX-like; PF09297 zf-NADH-PPase [H]

EC number: =3.6.1.22 [H]

Molecular weight: Translated: 19072; Mature: 19072

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRQHSFCSFCGHPFAEHQPWPRLCANCGSTTYRNPLPVVLLLQPVDDGLLLIRRAAYPR
CCCCCCHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCC
RGQLALPGGFIEMGERWQDAAARELHEEAGVEVDPALISDFAVRSTSDGYLLVFGLGPLL
CCCEECCCCHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHCCCCCCEEEEEECCHHH
RSEDLPRFLPNSEAAERVIVTAPIELAFPLHTEMVARFFTQLRQWRPLT
CCCCCCCCCCCCHHHCEEEEECCCEEECCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MYRQHSFCSFCGHPFAEHQPWPRLCANCGSTTYRNPLPVVLLLQPVDDGLLLIRRAAYPR
CCCCCCHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCC
RGQLALPGGFIEMGERWQDAAARELHEEAGVEVDPALISDFAVRSTSDGYLLVFGLGPLL
CCCEECCCCHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHCCCCCCEEEEEECCHHH
RSEDLPRFLPNSEAAERVIVTAPIELAFPLHTEMVARFFTQLRQWRPLT
CCCCCCCCCCCCHHHCEEEEECCCEEECCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA