| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is bchE [H]
Identifier: 222527181
GI number: 222527181
Start: 4915065
End: 4916714
Strand: Reverse
Name: bchE [H]
Synonym: Chy400_3963
Alternate gene names: 222527181
Gene position: 4916714-4915065 (Counterclockwise)
Preceding gene: 222527182
Following gene: 222527177
Centisome position: 93.31
GC content: 54.48
Gene sequence:
>1650_bases ATGCGGATCATGATGATCCAGCCGAATTACCATGCTGGTGGAGCAGAGATTGCCGGCAACTGGCCACCGAGCTGGGTGGC GTACATTGGCGGGGCTTTACGGGCAGCAGGTTTTGATAACCTGCGCTTTGTTGATGCCATGACCGAAGACCTGCCTGACG AGAAGCTACGTCTTATCTTGCGCCACAATCGCCCTGATGTTGTCATGGCGACGGCGATCACGCCGATGATCTACAAAGCC CAGGAGACGCTCAAGATTGCCCGCGAAGAACTACCAAATGCCCGGCTGATCCTCGGTGGTATCCATCCGACCTTTATGTA TGGTCAGGTGCTGACTGAAGCGCCCTGGATCGACTATATCGTGCGTGGCGAAGGTGAAGAGATTATTGTCGAGTTGATGC AGGCCATCGCCTATGGTAGCGATCAGCGTGACCGGGTAAAGATTCGCGGGATTGCCTACCTCGAAGATGGCAAAGTCGTG GCGACGCCGGCCCGTGATCCGATTGCTGACCTCGACAAACTGACACCGGATTGGAGCCTCTACGACTGGAAGCGCTACAT CTACGTGCCGTTGAATGTGCGCGTGGCCGTGCCCAACTTCGCACGTGGATGTCCGTTCACATGCCGATTCTGTTCACAGT GGAAATTCTGGCGCCGTTACCGTGCGCGCAGCCCACAGAAATTTGTTGATGAAATCGAGACACTGGTACGTGATTACAAT GTTGGCTTCTTCATCCTGGCTGATGAAGAACCGACAATCAACCGCAAGAAATTCACTGCCCTCTGCGAAGAATTGATACG GCGTCAGGTACGAGTCTACTGGGGCATCAACACGCGGGTGACCGACATTTTGCGCGATGAAGCGCAGTTACCGCTCTGGC GAGCGGCGGGATTGGTGCATATTTCGCTCGGTACCGAGGCGGCAGCCCAGATGAATCTCGACCGCTTCCGCAAACAGACC ACCATTGAACAGAATAAACGGGCAATCGAACTGATTAAGAAGCACGGCATGGTGGCTGAAGCCCAGTTCATCATGGGTAT GGAGAACGAGACGCCGGAGACCATCGAGGAGACCTATCGTTACGTCCTCGACTGGAAGCCGGATATGGCGAACTGGAACA TGTACACCCCGTGGCCATTTGCGGAACTATTTGAGGAACTGGGCGACCGGGTTGAGGTGCGTGATTACGCCAAATACAAC TTCGTGACTCCGATCATGAAGCCTGATTTGATGGATCGGGAAGAGGTATTGAAAGGCGTCCTCCGCAACTATGCACGCTT CTACATGCGTAAGGCGTTTCTCGAATACCCGTTTATCAAAGACCCCTTCAAGCGCCGCTATATGTTGGGTTGTTTACGTG CCTTTATGAAGACGACGGTCACCCGCCGCTTCTACGATCTGGGTCGTGTGCATGTGCGCGGCACACAGCTTGAGATTGAT CTGGGTTTCGACGAGTCACGTGTGTTGACGCCAGAGCAGATCGCTGCGCTGAAAGAGCAGAAAGTATTGCATGCCGATAC CACCTTTGGTGGCGCAGCACCCGGCATCGATCCAGAGGAGATCAAGATTCAAGCGGAAAACCCACTCAACTTACCGCTTG AGGCAGCAAGCGTCAACCCCGGTAGCGAATCCGAGACTCGCTCAGCCTGA
Upstream 100 bases:
>100_bases GTGAGTTTGCAGTGGAGTTGAGCAGATGATCTGCTGCTCATCATAGCTTTCTATGTACGTGTAGTTCAGACTTGGTCGTC AAAAGGAAGAGAGGTCTCGC
Downstream 100 bases:
>100_bases AGGTCAATTGCCTGCACCGGTACGCTGTCACGAGAACAACGACAGCGTACCGGTTTTTATCACCATCCGCCAAACAGAGT ATAGCCCAGCACCACGACCA
Product: magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase
Products: NA
Alternate protein names: Anaerobic Mg-protoporphyrin IX monomethyl ester oxidative cyclase [H]
Number of amino acids: Translated: 549; Mature: 549
Protein sequence:
>549_residues MRIMMIQPNYHAGGAEIAGNWPPSWVAYIGGALRAAGFDNLRFVDAMTEDLPDEKLRLILRHNRPDVVMATAITPMIYKA QETLKIAREELPNARLILGGIHPTFMYGQVLTEAPWIDYIVRGEGEEIIVELMQAIAYGSDQRDRVKIRGIAYLEDGKVV ATPARDPIADLDKLTPDWSLYDWKRYIYVPLNVRVAVPNFARGCPFTCRFCSQWKFWRRYRARSPQKFVDEIETLVRDYN VGFFILADEEPTINRKKFTALCEELIRRQVRVYWGINTRVTDILRDEAQLPLWRAAGLVHISLGTEAAAQMNLDRFRKQT TIEQNKRAIELIKKHGMVAEAQFIMGMENETPETIEETYRYVLDWKPDMANWNMYTPWPFAELFEELGDRVEVRDYAKYN FVTPIMKPDLMDREEVLKGVLRNYARFYMRKAFLEYPFIKDPFKRRYMLGCLRAFMKTTVTRRFYDLGRVHVRGTQLEID LGFDESRVLTPEQIAALKEQKVLHADTTFGGAAPGIDPEEIKIQAENPLNLPLEAASVNPGSESETRSA
Sequences:
>Translated_549_residues MRIMMIQPNYHAGGAEIAGNWPPSWVAYIGGALRAAGFDNLRFVDAMTEDLPDEKLRLILRHNRPDVVMATAITPMIYKA QETLKIAREELPNARLILGGIHPTFMYGQVLTEAPWIDYIVRGEGEEIIVELMQAIAYGSDQRDRVKIRGIAYLEDGKVV ATPARDPIADLDKLTPDWSLYDWKRYIYVPLNVRVAVPNFARGCPFTCRFCSQWKFWRRYRARSPQKFVDEIETLVRDYN VGFFILADEEPTINRKKFTALCEELIRRQVRVYWGINTRVTDILRDEAQLPLWRAAGLVHISLGTEAAAQMNLDRFRKQT TIEQNKRAIELIKKHGMVAEAQFIMGMENETPETIEETYRYVLDWKPDMANWNMYTPWPFAELFEELGDRVEVRDYAKYN FVTPIMKPDLMDREEVLKGVLRNYARFYMRKAFLEYPFIKDPFKRRYMLGCLRAFMKTTVTRRFYDLGRVHVRGTQLEID LGFDESRVLTPEQIAALKEQKVLHADTTFGGAAPGIDPEEIKIQAENPLNLPLEAASVNPGSESETRSA >Mature_549_residues MRIMMIQPNYHAGGAEIAGNWPPSWVAYIGGALRAAGFDNLRFVDAMTEDLPDEKLRLILRHNRPDVVMATAITPMIYKA QETLKIAREELPNARLILGGIHPTFMYGQVLTEAPWIDYIVRGEGEEIIVELMQAIAYGSDQRDRVKIRGIAYLEDGKVV ATPARDPIADLDKLTPDWSLYDWKRYIYVPLNVRVAVPNFARGCPFTCRFCSQWKFWRRYRARSPQKFVDEIETLVRDYN VGFFILADEEPTINRKKFTALCEELIRRQVRVYWGINTRVTDILRDEAQLPLWRAAGLVHISLGTEAAAQMNLDRFRKQT TIEQNKRAIELIKKHGMVAEAQFIMGMENETPETIEETYRYVLDWKPDMANWNMYTPWPFAELFEELGDRVEVRDYAKYN FVTPIMKPDLMDREEVLKGVLRNYARFYMRKAFLEYPFIKDPFKRRYMLGCLRAFMKTTVTRRFYDLGRVHVRGTQLEID LGFDESRVLTPEQIAALKEQKVLHADTTFGGAAPGIDPEEIKIQAENPLNLPLEAASVNPGSESETRSA
Specific function: Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis in anaerobic conditions. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-prot
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 B12-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011772 - InterPro: IPR006158 - InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR007197 [H]
Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 63516; Mature: 63516
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIMMIQPNYHAGGAEIAGNWPPSWVAYIGGALRAAGFDNLRFVDAMTEDLPDEKLRLIL CEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHCCCHHHHHHHH RHNRPDVVMATAITPMIYKAQETLKIAREELPNARLILGGIHPTFMYGQVLTEAPWIDYI HCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCEEEE VRGEGEEIIVELMQAIAYGSDQRDRVKIRGIAYLEDGKVVATPARDPIADLDKLTPDWSL EECCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCEEECCCCCCHHHHHHCCCCCCE YDWKRYIYVPLNVRVAVPNFARGCPFTCRFCSQWKFWRRYRARSPQKFVDEIETLVRDYN EECEEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC VGFFILADEEPTINRKKFTALCEELIRRQVRVYWGINTRVTDILRDEAQLPLWRAAGLVH CCEEEEECCCCCCCHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHCCCCHHHHCCEEE ISLGTEAAAQMNLDRFRKQTTIEQNKRAIELIKKHGMVAEAQFIMGMENETPETIEETYR EECCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHCCCCCCCHHHHHHHHH YVLDWKPDMANWNMYTPWPFAELFEELGDRVEVRDYAKYNFVTPIMKPDLMDREEVLKGV HHEECCCCCCCCCCCCCCCHHHHHHHHCCCEEEHHHHHCCCCCCCCCCCCCCHHHHHHHH LRNYARFYMRKAFLEYPFIKDPFKRRYMLGCLRAFMKTTVTRRFYDLGRVHVRGTQLEID HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECEEEEEE LGFDESRVLTPEQIAALKEQKVLHADTTFGGAAPGIDPEEIKIQAENPLNLPLEAASVNP ECCCCCCCCCHHHHHHHHHHCEEEECCCCCCCCCCCCHHHEEEEECCCCCCCEEECCCCC GSESETRSA CCCCCCCCC >Mature Secondary Structure MRIMMIQPNYHAGGAEIAGNWPPSWVAYIGGALRAAGFDNLRFVDAMTEDLPDEKLRLIL CEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHCCCHHHHHHHH RHNRPDVVMATAITPMIYKAQETLKIAREELPNARLILGGIHPTFMYGQVLTEAPWIDYI HCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCEEEE VRGEGEEIIVELMQAIAYGSDQRDRVKIRGIAYLEDGKVVATPARDPIADLDKLTPDWSL EECCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCEEECCCCCCHHHHHHCCCCCCE YDWKRYIYVPLNVRVAVPNFARGCPFTCRFCSQWKFWRRYRARSPQKFVDEIETLVRDYN EECEEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC VGFFILADEEPTINRKKFTALCEELIRRQVRVYWGINTRVTDILRDEAQLPLWRAAGLVH CCEEEEECCCCCCCHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHCCCCHHHHCCEEE ISLGTEAAAQMNLDRFRKQTTIEQNKRAIELIKKHGMVAEAQFIMGMENETPETIEETYR EECCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHCCCCCCCHHHHHHHHH YVLDWKPDMANWNMYTPWPFAELFEELGDRVEVRDYAKYNFVTPIMKPDLMDREEVLKGV HHEECCCCCCCCCCCCCCCHHHHHHHHCCCEEEHHHHHCCCCCCCCCCCCCCHHHHHHHH LRNYARFYMRKAFLEYPFIKDPFKRRYMLGCLRAFMKTTVTRRFYDLGRVHVRGTQLEID HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECEEEEEE LGFDESRVLTPEQIAALKEQKVLHADTTFGGAAPGIDPEEIKIQAENPLNLPLEAASVNP ECCCCCCCCCHHHHHHHHHHCEEEECCCCCCCCCCCCHHHEEEEECCCCCCCEEECCCCC GSESETRSA CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA