| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is prs [H]
Identifier: 222527107
GI number: 222527107
Start: 4837450
End: 4838448
Strand: Reverse
Name: prs [H]
Synonym: Chy400_3888
Alternate gene names: 222527107
Gene position: 4838448-4837450 (Counterclockwise)
Preceding gene: 222527108
Following gene: 222527104
Centisome position: 91.83
GC content: 54.15
Gene sequence:
>999_bases ATGGGAAGCCGCTTCGACGAGATGCGGATTTTTGCCGGCAATGGTAATCTACCACTGGCCAGGGCCATCAGTGAGCGCCT CGGCGTTCCGCTGGGTGATGTTACCATTGTGAAGTTTAGCAATGAGAATATCTTTGTCAGGCTTAATGAAAGTGTACGTG AAAAGGATGTCTTCGTTATTCAATCACTGTCAATGCCCGATCTCAGTGATCGGATTATGGAATTGCTGATTTTACTCGAT GCCTGTAAGCGTGCCTCTGCCGGGCGGATTACCGCTGTCATTCCTTATTACGCTTACGGGCGTACTGATAAGAAAGACCA GCCCCGTGTACCGATTACCGCCCGCTTGCTGGCCGATATGATCCAGGTTGCCGGCGCGCATCAGGTGATGACGATTGACC TGCACGCCGGGCAGATTCAGGGCTTTTTCTCGATCCCGATGGATGAACTGACAGCCATGAATCTGCTGGTGCGCTATTTT GCCGATAAGGGCTGGAACGATCTGATTGTCGTCTCGCCCGATGTTGGCTTTGCCAAACGTGCCCGCAACTTCGCCGAAGC CCTGAATGCGCCGCTGGCGATTGCTGAAAAGCGCCGGCTGCAACACTTTGATCGGAAAGACGGTTCACTCACCGTTCCGG AAATTCTGAATCTGATCGGTGATGTACGCGGCAAGCGTTGTCTGATTGTAGACGACGAGATTGCCACCGGTAGCTCGATC CTCGAAGTCGTGCAGTTGCTCGAAAAGGAGGGCGCGAGCGAGATTTATGCCTGCTGCGTCCACCCGGTGTTCGCCGGGAA TGCTATCGAGCGCCTGCGGGCAAGTCCGATCCGCGAGCTTGTGGTGACCGATACATTACCGGTTGCTCCGGAACGACGCT GGCCCGGCCTGACAATCCTCTCGGTCAGTACGTTGATTGCTGAAGTCATCCAGCGCATCCATAGCGGTGTGAGTGTCGAT ACGATATTTCAACATCGTCGCCATCCAGCATTAAGCTAG
Upstream 100 bases:
>100_bases TACCGGTAGGCTGGCGGTTGTCGCGGACTGAGCTGTTGGCGATGTTTGCAATCGACTCAGGCGTTGTTTGAACGGTACCT CGCAGGCTAAGGAGGAAGGA
Downstream 100 bases:
>100_bases ATTACAGGGTGCGACCTCATATACCGGTGTCGCACCCCTGTGCCTACTCGAACCCCAGACCTCGTTCGCGCAAACTGACG TAGCGGCCATTGCCGATAAT
Product: ribose-phosphate pyrophosphokinase
Products: NA
Alternate protein names: RPPK; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase [H]
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MGSRFDEMRIFAGNGNLPLARAISERLGVPLGDVTIVKFSNENIFVRLNESVREKDVFVIQSLSMPDLSDRIMELLILLD ACKRASAGRITAVIPYYAYGRTDKKDQPRVPITARLLADMIQVAGAHQVMTIDLHAGQIQGFFSIPMDELTAMNLLVRYF ADKGWNDLIVVSPDVGFAKRARNFAEALNAPLAIAEKRRLQHFDRKDGSLTVPEILNLIGDVRGKRCLIVDDEIATGSSI LEVVQLLEKEGASEIYACCVHPVFAGNAIERLRASPIRELVVTDTLPVAPERRWPGLTILSVSTLIAEVIQRIHSGVSVD TIFQHRRHPALS
Sequences:
>Translated_332_residues MGSRFDEMRIFAGNGNLPLARAISERLGVPLGDVTIVKFSNENIFVRLNESVREKDVFVIQSLSMPDLSDRIMELLILLD ACKRASAGRITAVIPYYAYGRTDKKDQPRVPITARLLADMIQVAGAHQVMTIDLHAGQIQGFFSIPMDELTAMNLLVRYF ADKGWNDLIVVSPDVGFAKRARNFAEALNAPLAIAEKRRLQHFDRKDGSLTVPEILNLIGDVRGKRCLIVDDEIATGSSI LEVVQLLEKEGASEIYACCVHPVFAGNAIERLRASPIRELVVTDTLPVAPERRWPGLTILSVSTLIAEVIQRIHSGVSVD TIFQHRRHPALS >Mature_331_residues GSRFDEMRIFAGNGNLPLARAISERLGVPLGDVTIVKFSNENIFVRLNESVREKDVFVIQSLSMPDLSDRIMELLILLDA CKRASAGRITAVIPYYAYGRTDKKDQPRVPITARLLADMIQVAGAHQVMTIDLHAGQIQGFFSIPMDELTAMNLLVRYFA DKGWNDLIVVSPDVGFAKRARNFAEALNAPLAIAEKRRLQHFDRKDGSLTVPEILNLIGDVRGKRCLIVDDEIATGSSIL EVVQLLEKEGASEIYACCVHPVFAGNAIERLRASPIRELVVTDTLPVAPERRWPGLTILSVSTLIAEVIQRIHSGVSVDT IFQHRRHPALS
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG0462
COG function: function code FE; Phosphoribosylpyrophosphate synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribose-phosphate pyrophosphokinase family [H]
Homologues:
Organism=Homo sapiens, GI4506127, Length=323, Percent_Identity=39.3188854489164, Blast_Score=244, Evalue=7e-65, Organism=Homo sapiens, GI28557709, Length=321, Percent_Identity=39.5638629283489, Blast_Score=243, Evalue=2e-64, Organism=Homo sapiens, GI4506129, Length=321, Percent_Identity=39.2523364485981, Blast_Score=243, Evalue=2e-64, Organism=Homo sapiens, GI84875539, Length=324, Percent_Identity=38.8888888888889, Blast_Score=238, Evalue=8e-63, Organism=Homo sapiens, GI4506133, Length=345, Percent_Identity=34.4927536231884, Blast_Score=180, Evalue=1e-45, Organism=Homo sapiens, GI194018537, Length=345, Percent_Identity=32.463768115942, Blast_Score=169, Evalue=3e-42, Organism=Homo sapiens, GI310128524, Length=141, Percent_Identity=31.9148936170213, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI310115209, Length=141, Percent_Identity=31.9148936170213, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI310118259, Length=141, Percent_Identity=31.9148936170213, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI310119946, Length=141, Percent_Identity=31.9148936170213, Blast_Score=90, Evalue=2e-18, Organism=Escherichia coli, GI1787458, Length=322, Percent_Identity=41.9254658385093, Blast_Score=259, Evalue=2e-70, Organism=Caenorhabditis elegans, GI17554702, Length=327, Percent_Identity=39.1437308868502, Blast_Score=245, Evalue=3e-65, Organism=Caenorhabditis elegans, GI71989924, Length=327, Percent_Identity=39.1437308868502, Blast_Score=244, Evalue=6e-65, Organism=Caenorhabditis elegans, GI25149168, Length=323, Percent_Identity=39.3188854489164, Blast_Score=243, Evalue=7e-65, Organism=Caenorhabditis elegans, GI17554704, Length=321, Percent_Identity=39.5638629283489, Blast_Score=242, Evalue=2e-64, Organism=Caenorhabditis elegans, GI17570245, Length=339, Percent_Identity=31.2684365781711, Blast_Score=166, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6320946, Length=322, Percent_Identity=41.304347826087, Blast_Score=241, Evalue=9e-65, Organism=Saccharomyces cerevisiae, GI6319403, Length=324, Percent_Identity=40.1234567901235, Blast_Score=239, Evalue=4e-64, Organism=Saccharomyces cerevisiae, GI6321776, Length=322, Percent_Identity=36.6459627329193, Blast_Score=220, Evalue=2e-58, Organism=Saccharomyces cerevisiae, GI6322667, Length=200, Percent_Identity=40, Blast_Score=145, Evalue=1e-35, Organism=Saccharomyces cerevisiae, GI6324511, Length=270, Percent_Identity=30.7407407407407, Blast_Score=128, Evalue=2e-30, Organism=Drosophila melanogaster, GI21355239, Length=326, Percent_Identity=41.1042944785276, Blast_Score=246, Evalue=2e-65, Organism=Drosophila melanogaster, GI45551540, Length=349, Percent_Identity=38.3954154727794, Blast_Score=233, Evalue=1e-61, Organism=Drosophila melanogaster, GI281362873, Length=354, Percent_Identity=32.4858757062147, Blast_Score=180, Evalue=1e-45, Organism=Drosophila melanogaster, GI24651454, Length=354, Percent_Identity=32.4858757062147, Blast_Score=180, Evalue=1e-45, Organism=Drosophila melanogaster, GI24651458, Length=354, Percent_Identity=32.4858757062147, Blast_Score=180, Evalue=1e-45, Organism=Drosophila melanogaster, GI24651456, Length=354, Percent_Identity=32.4858757062147, Blast_Score=180, Evalue=1e-45, Organism=Drosophila melanogaster, GI24651462, Length=373, Percent_Identity=30.8310991957105, Blast_Score=173, Evalue=2e-43, Organism=Drosophila melanogaster, GI24651464, Length=373, Percent_Identity=30.8310991957105, Blast_Score=173, Evalue=2e-43, Organism=Drosophila melanogaster, GI45552010, Length=373, Percent_Identity=30.8310991957105, Blast_Score=172, Evalue=2e-43,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000842 - InterPro: IPR005946 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.7.6.1 [H]
Molecular weight: Translated: 36803; Mature: 36672
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: PS00114 PRPP_SYNTHETASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSRFDEMRIFAGNGNLPLARAISERLGVPLGDVTIVKFSNENIFVRLNESVREKDVFVI CCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCCCCCCCEEEE QSLSMPDLSDRIMELLILLDACKRASAGRITAVIPYYAYGRTDKKDQPRVPITARLLADM EECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHCCCCCCCCCCCCCCHHHHHHHHH IQVAGAHQVMTIDLHAGQIQGFFSIPMDELTAMNLLVRYFADKGWNDLIVVSPDVGFAKR HHHCCCCEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHH ARNFAEALNAPLAIAEKRRLQHFDRKDGSLTVPEILNLIGDVRGKRCLIVDDEIATGSSI HHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCCEEEEECCCCCCCHHH LEVVQLLEKEGASEIYACCVHPVFAGNAIERLRASPIRELVVTDTLPVAPERRWPGLTIL HHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCEEHH SVSTLIAEVIQRIHSGVSVDTIFQHRRHPALS HHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCC >Mature Secondary Structure GSRFDEMRIFAGNGNLPLARAISERLGVPLGDVTIVKFSNENIFVRLNESVREKDVFVI CCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCCCCCCCEEEE QSLSMPDLSDRIMELLILLDACKRASAGRITAVIPYYAYGRTDKKDQPRVPITARLLADM EECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHCCCCCCCCCCCCCCHHHHHHHHH IQVAGAHQVMTIDLHAGQIQGFFSIPMDELTAMNLLVRYFADKGWNDLIVVSPDVGFAKR HHHCCCCEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHH ARNFAEALNAPLAIAEKRRLQHFDRKDGSLTVPEILNLIGDVRGKRCLIVDDEIATGSSI HHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCCEEEEECCCCCCCHHH LEVVQLLEKEGASEIYACCVHPVFAGNAIERLRASPIRELVVTDTLPVAPERRWPGLTIL HHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCEEHH SVSTLIAEVIQRIHSGVSVDTIFQHRRHPALS HHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]