Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222527103

Identifier: 222527103

GI number: 222527103

Start: 4833360

End: 4833752

Strand: Reverse

Name: 222527103

Synonym: Chy400_3884

Alternate gene names: NA

Gene position: 4833752-4833360 (Counterclockwise)

Preceding gene: 222527104

Following gene: 222527102

Centisome position: 91.74

GC content: 62.6

Gene sequence:

>393_bases
ATGCAGCGTGACATGTGGGTAATGCATAGCATTGAAGGAATGAGGGGGAGTGTGCTTCCCATCCTTTGCCGGGCGCTGGG
AGCGCGCGCCGGAGGCGCGCATGGTGCCGGTACCAGTGCTGAAGGGAGGAGCCAGGCGCAAGCTCCCGCCCCTGGCGGTA
TGCACGGACGGCCAGGACAGATGATCGAACCCAACGTCTACCCTATCAGGAAGCCCTCGATCAAACGTCTGCCCTCCCCT
CTCCCACCCCCAGGGGCTACGCATTACCCATACCTGGTGTCAATCACGTGCGTATCAGCGGGGATGATCGCTATGGGTGC
TGTTGTAGGCGACTGGGCCGGTGGCAGTGCGCCGCTCCAGCCGTGCTATCACGTGCTGGATGGATTGCCGTAG

Upstream 100 bases:

>100_bases
CCTGCGTCCCAGCAGCCACAGCCACCCATGCCGGCGATAGAGAGATTCCTCCACGCAGGCTGGAAGCCCGCGCCACGGGG
AGCGCGTGCAGTCTGGCCTA

Downstream 100 bases:

>100_bases
CCGCTCGTCATGCGCCTATCGCGCAGTTTGGAGTGCGGCAGCCATGCTGCCGCGCCAGCCGTGCTCACGATCCGGCGCGT
GGCATACCGTTGACCCTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MQRDMWVMHSIEGMRGSVLPILCRALGARAGGAHGAGTSAEGRSQAQAPAPGGMHGRPGQMIEPNVYPIRKPSIKRLPSP
LPPPGATHYPYLVSITCVSAGMIAMGAVVGDWAGGSAPLQPCYHVLDGLP

Sequences:

>Translated_130_residues
MQRDMWVMHSIEGMRGSVLPILCRALGARAGGAHGAGTSAEGRSQAQAPAPGGMHGRPGQMIEPNVYPIRKPSIKRLPSP
LPPPGATHYPYLVSITCVSAGMIAMGAVVGDWAGGSAPLQPCYHVLDGLP
>Mature_130_residues
MQRDMWVMHSIEGMRGSVLPILCRALGARAGGAHGAGTSAEGRSQAQAPAPGGMHGRPGQMIEPNVYPIRKPSIKRLPSP
LPPPGATHYPYLVSITCVSAGMIAMGAVVGDWAGGSAPLQPCYHVLDGLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13476; Mature: 13476

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRDMWVMHSIEGMRGSVLPILCRALGARAGGAHGAGTSAEGRSQAQAPAPGGMHGRPGQ
CCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
MIEPNVYPIRKPSIKRLPSPLPPPGATHYPYLVSITCVSAGMIAMGAVVGDWAGGSAPLQ
CCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCHH
PCYHVLDGLP
HHHHHHCCCC
>Mature Secondary Structure
MQRDMWVMHSIEGMRGSVLPILCRALGARAGGAHGAGTSAEGRSQAQAPAPGGMHGRPGQ
CCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
MIEPNVYPIRKPSIKRLPSPLPPPGATHYPYLVSITCVSAGMIAMGAVVGDWAGGSAPLQ
CCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCHH
PCYHVLDGLP
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA