| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is ubiE [H]
Identifier: 222527093
GI number: 222527093
Start: 4820075
End: 4820902
Strand: Direct
Name: ubiE [H]
Synonym: Chy400_3872
Alternate gene names: 222527093
Gene position: 4820075-4820902 (Clockwise)
Preceding gene: 222527092
Following gene: 222527094
Centisome position: 91.48
GC content: 57.37
Gene sequence:
>828_bases ATGGACCCTCGACTCTTACCTTTGCTTAGCTGTCCACGCCACCCAACAGTGACGTTGACAGTAGAACAGGTTGAACGTGT AGTCAACGGTGCGATTGTGTCTGGACGGCTACGCTGTCCGGTATGCGCCACGACATACCTGATCAAAGACGGTATTCTCG ACATGATCGGTCAACACCGGCCAACCAGTGCTGCGCAGGTGGTCAACGAGGTGCCGGTTGCCGCATGGGCTTACGAACGC ACCTGGCGACCATTCGCGCTCAGCTTACTCAGCGGTGAGCAATTTCCCCTTACCCGCGAACTCAAACTGATTACCGGTCT GGCGGGTGCCGAGCGGGGAGGGCTGATGGTTGACGTTGGTTGTAGCAATGGTCTATACGCACGTGCATTGGAACATGTCC GCCGTCAGCGTGGCGCCGGTGGTTTTGTGGTTGGCATTGATCTGAGTATGGCAATGCTCCAGGAAGCACAACGGCGTGCT CGCCACGAGGGGCTGTCGATCAGCTTTATTCGTGCCAGTGCCCAGGCCATGCCCTTTGCCGATGGAACCGTCGATGCGCT GGTTATGGGGGGCAGCTTGAATGAAATCGGCGATATTCCGGCAGCACTATCAGAATGGCGACGGCTCTTGAGTCCGCAAG GACGCGGTGTAATGATGAGCCTGGTTGCAGCATCCACACCGATTGGCCAGGGGATTCAGCAGCTCCTGGCAAGTGGTGGG CTTCAGTTTCCTTCGCTTGCTGAACTGAACCACTACTTCACCGCTGCCGGCCTGCGTCTGCGCGCCCAGTGGCAATACGG GATTGTGGTGTTTAGTGTGCTCCAGTAA
Upstream 100 bases:
>100_bases TCAATAATGAATGAGATAACTTCTAGCATACGAAACTCAGGAAGTCTATCCAGATGAATGCTGCCGTCCAGCGGTTGGCT AGTTATGGTACGATGAAGTT
Downstream 100 bases:
>100_bases TGCTCATCTATTTGACGAGAAGGGCCGGTTATGCTATATTCATAATCGTTGTACGGTGCCTGTAGCTCAACGGCAGAGCG CCTGACTGTGGATCAGGAAG
Product: type 11 methyltransferase
Products: S-adenosyl-L-homocysteine; ubiquinone-9
Alternate protein names: NA
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MDPRLLPLLSCPRHPTVTLTVEQVERVVNGAIVSGRLRCPVCATTYLIKDGILDMIGQHRPTSAAQVVNEVPVAAWAYER TWRPFALSLLSGEQFPLTRELKLITGLAGAERGGLMVDVGCSNGLYARALEHVRRQRGAGGFVVGIDLSMAMLQEAQRRA RHEGLSISFIRASAQAMPFADGTVDALVMGGSLNEIGDIPAALSEWRRLLSPQGRGVMMSLVAASTPIGQGIQQLLASGG LQFPSLAELNHYFTAAGLRLRAQWQYGIVVFSVLQ
Sequences:
>Translated_275_residues MDPRLLPLLSCPRHPTVTLTVEQVERVVNGAIVSGRLRCPVCATTYLIKDGILDMIGQHRPTSAAQVVNEVPVAAWAYER TWRPFALSLLSGEQFPLTRELKLITGLAGAERGGLMVDVGCSNGLYARALEHVRRQRGAGGFVVGIDLSMAMLQEAQRRA RHEGLSISFIRASAQAMPFADGTVDALVMGGSLNEIGDIPAALSEWRRLLSPQGRGVMMSLVAASTPIGQGIQQLLASGG LQFPSLAELNHYFTAAGLRLRAQWQYGIVVFSVLQ >Mature_275_residues MDPRLLPLLSCPRHPTVTLTVEQVERVVNGAIVSGRLRCPVCATTYLIKDGILDMIGQHRPTSAAQVVNEVPVAAWAYER TWRPFALSLLSGEQFPLTRELKLITGLAGAERGGLMVDVGCSNGLYARALEHVRRQRGAGGFVVGIDLSMAMLQEAQRRA RHEGLSISFIRASAQAMPFADGTVDALVMGGSLNEIGDIPAALSEWRRLLSPQGRGVMMSLVAASTPIGQGIQQLLASGG LQFPSLAELNHYFTAAGLRLRAQWQYGIVVFSVLQ
Specific function: Methyltransferase required for the conversion of dimethylmenaquinone (DMKH2) to menaquinone (MKH2) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004033 [H]
Pfam domain/function: PF01209 Ubie_methyltran [H]
EC number: 2.1.1.64
Molecular weight: Translated: 29686; Mature: 29686
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPRLLPLLSCPRHPTVTLTVEQVERVVNGAIVSGRLRCPVCATTYLIKDGILDMIGQHR CCCCCCHHHCCCCCCEEEEEHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCC PTSAAQVVNEVPVAAWAYERTWRPFALSLLSGEQFPLTRELKLITGLAGAERGGLMVDVG CCHHHHHHHHCCHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEEEC CSNGLYARALEHVRRQRGAGGFVVGIDLSMAMLQEAQRRARHEGLSISFIRASAQAMPFA CCCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCC DGTVDALVMGGSLNEIGDIPAALSEWRRLLSPQGRGVMMSLVAASTPIGQGIQQLLASGG CCCEEEEEECCCHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHCC LQFPSLAELNHYFTAAGLRLRAQWQYGIVVFSVLQ CCCCCHHHHHHHHHHCCEEEEEEEECCEEEEEECC >Mature Secondary Structure MDPRLLPLLSCPRHPTVTLTVEQVERVVNGAIVSGRLRCPVCATTYLIKDGILDMIGQHR CCCCCCHHHCCCCCCEEEEEHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCC PTSAAQVVNEVPVAAWAYERTWRPFALSLLSGEQFPLTRELKLITGLAGAERGGLMVDVG CCHHHHHHHHCCHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEEEC CSNGLYARALEHVRRQRGAGGFVVGIDLSMAMLQEAQRRARHEGLSISFIRASAQAMPFA CCCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCC DGTVDALVMGGSLNEIGDIPAALSEWRRLLSPQGRGVMMSLVAASTPIGQGIQQLLASGG CCCEEEEEECCCHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHCC LQFPSLAELNHYFTAAGLRLRAQWQYGIVVFSVLQ CCCCCHHHHHHHHHHCCEEEEEEEECCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-adenosyl-L-methionine; 3-demethylubiquinone-9
Specific reaction: S-adenosyl-L-methionine + 3-demethylubiquinone-9 = S-adenosyl-L-homocysteine + ubiquinone-9
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA