| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527053
Identifier: 222527053
GI number: 222527053
Start: 4775269
End: 4776108
Strand: Reverse
Name: 222527053
Synonym: Chy400_3832
Alternate gene names: NA
Gene position: 4776108-4775269 (Counterclockwise)
Preceding gene: 222527054
Following gene: 222527052
Centisome position: 90.65
GC content: 40.71
Gene sequence:
>840_bases ATGCTGATGAAGGTCTTGGTTACAGTTAAAACCTATCCAACCATTTCGGTTAAGTACGACGAACTGGTTTGTACTGCCGG TTTTCGTGAGGATGGCTCATGGATCAGGATTTACCCTATCCCCTTTCGTAAAAAGACCTATGAAGAGCGATACCGAAAAT ATGATTGGATTGAAATCGAACTTGAAAAAAGTCAACAAGATTTTCGTCCAGAGAGTTATAGACCAGTTCCTGGAACGAAG ATAAGGGTTGTGGGAAGTATTGGTACAGAAAATAACTGGGAAGAACGTAAGAAAGTTTGTTTGAGGAAAGTGTATGATAA TCTTGATGAGTTGATTGCCGAGGCTAAGAATCCAAATATTTGTACATCCCTTGCCACTTTTAAGCCTACCGCAATTCTCG ACTTCTATGCAGAAGCAACTGAAAGAGAGTGGGATTTTCGCGAAGTGATGCAAATTCAGGCAAAACGGCGGCAACTGAAA CTTTTTCCCGATGATGAAGAAGATTTGGGTGAAGAGTTTCGGATTGTAAGAAAACTTCCCTATCAATTCAAGTACCGCTT TGTAGACAGTGCCGGTAGAGAAAGTAATCTTATGATAGAAGACTGGGAAACAGGTCAACTGTTCTGGAATTGTCTTGAAC GCCACGAGGGTGACGAGCAAAAAGCAATTGAGGATGTGCGTAAAAAATATCTTGATGATTTTGCCAGAACAAAGGATTTG TATTTCTTTTTAGGTACTACAATGCAGTACCACAAAAAAGCTCCTAATCCCTTCGTTATCATTGGAACGTTTCATCCAAA ACGAGAAAACCAGTTGCGGCTTTTCCAGGAGCTGTCTTGA
Upstream 100 bases:
>100_bases GAAGCTGAGAGCCAGCGCTGCCATCGCAGTCATCTGGCCGATGCAATCAGCAAATTGCCCGAATTTTCCTACGAAGTAGT ACATCTTTGAGGTGAGGATA
Downstream 100 bases:
>100_bases ATATTGTACGTGTGTTAACGTATTTCGCACGAGAACCTGTTTCATTAATCCACTCGGCAATCACTCCATCGGATTGCAAT CAGTTCCGTGCTAAGTAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MLMKVLVTVKTYPTISVKYDELVCTAGFREDGSWIRIYPIPFRKKTYEERYRKYDWIEIELEKSQQDFRPESYRPVPGTK IRVVGSIGTENNWEERKKVCLRKVYDNLDELIAEAKNPNICTSLATFKPTAILDFYAEATEREWDFREVMQIQAKRRQLK LFPDDEEDLGEEFRIVRKLPYQFKYRFVDSAGRESNLMIEDWETGQLFWNCLERHEGDEQKAIEDVRKKYLDDFARTKDL YFFLGTTMQYHKKAPNPFVIIGTFHPKRENQLRLFQELS
Sequences:
>Translated_279_residues MLMKVLVTVKTYPTISVKYDELVCTAGFREDGSWIRIYPIPFRKKTYEERYRKYDWIEIELEKSQQDFRPESYRPVPGTK IRVVGSIGTENNWEERKKVCLRKVYDNLDELIAEAKNPNICTSLATFKPTAILDFYAEATEREWDFREVMQIQAKRRQLK LFPDDEEDLGEEFRIVRKLPYQFKYRFVDSAGRESNLMIEDWETGQLFWNCLERHEGDEQKAIEDVRKKYLDDFARTKDL YFFLGTTMQYHKKAPNPFVIIGTFHPKRENQLRLFQELS >Mature_279_residues MLMKVLVTVKTYPTISVKYDELVCTAGFREDGSWIRIYPIPFRKKTYEERYRKYDWIEIELEKSQQDFRPESYRPVPGTK IRVVGSIGTENNWEERKKVCLRKVYDNLDELIAEAKNPNICTSLATFKPTAILDFYAEATEREWDFREVMQIQAKRRQLK LFPDDEEDLGEEFRIVRKLPYQFKYRFVDSAGRESNLMIEDWETGQLFWNCLERHEGDEQKAIEDVRKKYLDDFARTKDL YFFLGTTMQYHKKAPNPFVIIGTFHPKRENQLRLFQELS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33497; Mature: 33497
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMKVLVTVKTYPTISVKYDELVCTAGFREDGSWIRIYPIPFRKKTYEERYRKYDWIEIE CCEEEEEEEECCCEEEEEHHHEEEECCCCCCCCEEEEEECCCCHHHHHHHHCCCCCEEEE LEKSQQDFRPESYRPVPGTKIRVVGSIGTENNWEERKKVCLRKVYDNLDELIAEAKNPNI EECCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC CTSLATFKPTAILDFYAEATEREWDFREVMQIQAKRRQLKLFPDDEEDLGEEFRIVRKLP EEHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC YQFKYRFVDSAGRESNLMIEDWETGQLFWNCLERHEGDEQKAIEDVRKKYLDDFARTKDL HHEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCE YFFLGTTMQYHKKAPNPFVIIGTFHPKRENQLRLFQELS EEEECCCHHHHHCCCCCEEEEECCCCCCCCHHHHHHHCC >Mature Secondary Structure MLMKVLVTVKTYPTISVKYDELVCTAGFREDGSWIRIYPIPFRKKTYEERYRKYDWIEIE CCEEEEEEEECCCEEEEEHHHEEEECCCCCCCCEEEEEECCCCHHHHHHHHCCCCCEEEE LEKSQQDFRPESYRPVPGTKIRVVGSIGTENNWEERKKVCLRKVYDNLDELIAEAKNPNI EECCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC CTSLATFKPTAILDFYAEATEREWDFREVMQIQAKRRQLKLFPDDEEDLGEEFRIVRKLP EEHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC YQFKYRFVDSAGRESNLMIEDWETGQLFWNCLERHEGDEQKAIEDVRKKYLDDFARTKDL HHEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCE YFFLGTTMQYHKKAPNPFVIIGTFHPKRENQLRLFQELS EEEECCCHHHHHCCCCCEEEEECCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA