Click here to switch to the map view.

The map label for this gene is 222527045

Identifier: 222527045

GI number: 222527045

Start: 4766054

End: 4767223

Strand: Direct

Name: 222527045

Synonym: Chy400_3824

Alternate gene names: NA

Gene position: 4766054-4767223 (Clockwise)

Preceding gene: 222527043

Following gene: 222527046

Centisome position: 90.46

GC content: 53.42

Gene sequence:

>1170_bases
ATGGATTTGCGCACTCGTCTCATTCTTGCACTCTCACCACTGATTATCGCGCTCCTGCTCTTTGGTCTAGTGGCGTTCTT
CAATCGACAGCGTGTGACTCAGGCTGTCGACGAGGTGAATCGGGCATCCAAAGATCTGATAGAAGTCGCGCAGAGTGAGT
CGCTCATTTTTCTCGAACAGTACAATGTGAGCGAGATTATCGCCGGTCGGCAGAGTGATCGGAGCATGATAGAACCGCAA
CGGGCAACTATCCGCTCCTTTCTGTCTGAGTATACCGATCAAGGAAACGGAAGTTTCGTTGAACTTGAGCTGGCCGCCCG
TTTTGAGGTGATGGTTGCCCAGCACGATGCGGCACTGACCGTTTTTGATCGTGGTGATCGTGAAGAAGCGCTAGCAATGA
TTAGTAGCAACGATTACCACCGTAATATCCGGGCGATTCATAGCCTGGTTATCGGGGCACAACGCGAGTATGAGATACAG
TATCTACAAGCGATCAGTCAGCTTGAGCAGATTGTCAACCAGGGATTTTGGCTTGGGGCAACAGTAACCGGCGTGGCTAC
AGTCATCGCGATCACCCTTGCTTTAGCGCTCATCTGGCAGATTGGCAGGCATGTTGATAGCCTGACGGCAGATGCTGAAC
GATTGACCCAAACCGAGACTGATGGGCAACTCAGCCCGGTTGGATCGATCAATCAACTTCGTCGTCTACGTGATGCGTTT
CAGCATTTACTCGATGTTAACCGTCAACGACAGCAGCAGCTTGCCACTGCGCTGAAAGCACAACAGGCACAACTGGCGCG
AGAGCTGGAATTGCAGGCAACGATTAGAGCATTGAGTCTGCCGGTGACACCGTTAGGTGCAAATACGATCTTTCTGCCGC
TGGTCGGACATCTTGACGCTGAACGTGGTAAACAACTTGAACAGACCCTGCTCGATGCCATTCAGCAACGGCGTGCACGC
AAGGTGGTCATTGATGTCAGCGGTCTGGCTACCTTTGAAGAGGAGACCCTGCAAACCCTGATCCGGGTTGGTCAGGGTGC
CCGTCTGCTCGGTGCCCAGAGCATTCTGGTCGGCGTGCGCGCCGATCAAGCGTTGCACTTCACGCAGCTACCCTCCGGTC
TGTTCACCTATGCGCGCGATATTCCGGCGGCCCTCACAATGAACACATGA

Upstream 100 bases:

>100_bases
GATGAGTAGTGACGAACAGCGCAGGATCGCTCAATTCGCCAATCTGCGAGTCTTGCGGTAATATGTAAGCAGGGATACAG
CCTAGTTCTCTCATACGCCT

Downstream 100 bases:

>100_bases
GCACGAACAGTCTGTTATAATGCAGTGCGTTACCGCTTTGTGGTACGAAGGAGGCCATATGCACATTGTTGTGTGTCTGA
AGCAAGTCCCTCGCGATAAT

Product: hypothetical protein

Products: NA

Alternate protein names: PAS/PAC Sensor Protein; Anti-Anti Sigma Factor Protein; Sulfate Transporter/Antisigma-Factor Antagonist STAS; Histidine Kinase; PAS Sensor Protein; Positive Regulator Of Sigma-B; Anti-Sigma-Factor Antagonist Domain-Containing Protein

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MDLRTRLILALSPLIIALLLFGLVAFFNRQRVTQAVDEVNRASKDLIEVAQSESLIFLEQYNVSEIIAGRQSDRSMIEPQ
RATIRSFLSEYTDQGNGSFVELELAARFEVMVAQHDAALTVFDRGDREEALAMISSNDYHRNIRAIHSLVIGAQREYEIQ
YLQAISQLEQIVNQGFWLGATVTGVATVIAITLALALIWQIGRHVDSLTADAERLTQTETDGQLSPVGSINQLRRLRDAF
QHLLDVNRQRQQQLATALKAQQAQLARELELQATIRALSLPVTPLGANTIFLPLVGHLDAERGKQLEQTLLDAIQQRRAR
KVVIDVSGLATFEEETLQTLIRVGQGARLLGAQSILVGVRADQALHFTQLPSGLFTYARDIPAALTMNT

Sequences:

>Translated_389_residues
MDLRTRLILALSPLIIALLLFGLVAFFNRQRVTQAVDEVNRASKDLIEVAQSESLIFLEQYNVSEIIAGRQSDRSMIEPQ
RATIRSFLSEYTDQGNGSFVELELAARFEVMVAQHDAALTVFDRGDREEALAMISSNDYHRNIRAIHSLVIGAQREYEIQ
YLQAISQLEQIVNQGFWLGATVTGVATVIAITLALALIWQIGRHVDSLTADAERLTQTETDGQLSPVGSINQLRRLRDAF
QHLLDVNRQRQQQLATALKAQQAQLARELELQATIRALSLPVTPLGANTIFLPLVGHLDAERGKQLEQTLLDAIQQRRAR
KVVIDVSGLATFEEETLQTLIRVGQGARLLGAQSILVGVRADQALHFTQLPSGLFTYARDIPAALTMNT
>Mature_389_residues
MDLRTRLILALSPLIIALLLFGLVAFFNRQRVTQAVDEVNRASKDLIEVAQSESLIFLEQYNVSEIIAGRQSDRSMIEPQ
RATIRSFLSEYTDQGNGSFVELELAARFEVMVAQHDAALTVFDRGDREEALAMISSNDYHRNIRAIHSLVIGAQREYEIQ
YLQAISQLEQIVNQGFWLGATVTGVATVIAITLALALIWQIGRHVDSLTADAERLTQTETDGQLSPVGSINQLRRLRDAF
QHLLDVNRQRQQQLATALKAQQAQLARELELQATIRALSLPVTPLGANTIFLPLVGHLDAERGKQLEQTLLDAIQQRRAR
KVVIDVSGLATFEEETLQTLIRVGQGARLLGAQSILVGVRADQALHFTQLPSGLFTYARDIPAALTMNT

Specific function: Unknown

COG id: COG1366

COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43210; Mature: 43210

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLRTRLILALSPLIIALLLFGLVAFFNRQRVTQAVDEVNRASKDLIEVAQSESLIFLEQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
YNVSEIIAGRQSDRSMIEPQRATIRSFLSEYTDQGNGSFVELELAARFEVMVAQHDAALT
CCHHHHHHCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHEEECCCEEE
VFDRGDREEALAMISSNDYHRNIRAIHSLVIGAQREYEIQYLQAISQLEQIVNQGFWLGA
EECCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEECH
TVTGVATVIAITLALALIWQIGRHVDSLTADAERLTQTETDGQLSPVGSINQLRRLRDAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
QHLLDVNRQRQQQLATALKAQQAQLARELELQATIRALSLPVTPLGANTIFLPLVGHLDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHCCCH
ERGKQLEQTLLDAIQQRRARKVVIDVSGLATFEEETLQTLIRVGQGARLLGAQSILVGVR
HHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEC
ADQALHFTQLPSGLFTYARDIPAALTMNT
CCCHHHHHHCCHHHHHHHHHCCCEEECCC
>Mature Secondary Structure
MDLRTRLILALSPLIIALLLFGLVAFFNRQRVTQAVDEVNRASKDLIEVAQSESLIFLEQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
YNVSEIIAGRQSDRSMIEPQRATIRSFLSEYTDQGNGSFVELELAARFEVMVAQHDAALT
CCHHHHHHCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHEEECCCEEE
VFDRGDREEALAMISSNDYHRNIRAIHSLVIGAQREYEIQYLQAISQLEQIVNQGFWLGA
EECCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEECH
TVTGVATVIAITLALALIWQIGRHVDSLTADAERLTQTETDGQLSPVGSINQLRRLRDAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
QHLLDVNRQRQQQLATALKAQQAQLARELELQATIRALSLPVTPLGANTIFLPLVGHLDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHCCCH
ERGKQLEQTLLDAIQQRRARKVVIDVSGLATFEEETLQTLIRVGQGARLLGAQSILVGVR
HHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEC
ADQALHFTQLPSGLFTYARDIPAALTMNT
CCCHHHHHHCCHHHHHHHHHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA