| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is zraS [C]
Identifier: 222526995
GI number: 222526995
Start: 4693679
End: 4696297
Strand: Direct
Name: zraS [C]
Synonym: Chy400_3773
Alternate gene names: 222526995
Gene position: 4693679-4696297 (Clockwise)
Preceding gene: 222526994
Following gene: 222526996
Centisome position: 89.08
GC content: 54.79
Gene sequence:
>2619_bases ATGGCTGCCGTTTCCGATCCACCTTCACCTTCCGCGAAGACCTACCTTCGCGATCACTCAATCCAGCTCCTGCGCGATCT TATCTGGATAAGTCTGATAGCCGCACTAGCCTACACCATTTTCAGCCCGATTGACCCATCATTGATGCCACAGCGGATGG TTGTGGTGGTACCGCTGATCCTGGGCTTGTTGGGGGCCTGGTGGCTTATCCAACGCCAATACCTGCGACTGGCAAGTATC CTGGTGATTAGCATACTCTGGCTGGTACTGGCATTCTCGGCGTTCATCAGTGGTGGTCTGCAAGCACCGGCGTTTGCCGG CATCCCACTGGTGGTGATCATGGCCGGGATTTTACTCGGCTGGTGTGGTGCTCTGACTATTGCGCTACTTTCAATCGGTA CCGGTGCCCTCTTCGTGCGCTTTGCCGATCTCCTGCCACCACCACCGGTATTCCATTCTCCTCTGGTCTGGTTTATTACC TATACTCTCTACCTACTGCTGGCAACCCGCATGATTAGCCAGATTGTTACTCACTTCTATCAGTCTATGCAAGAGACGGA TAAAGAACTGAGCGAACGAAAGGCTGTCGAGCAGCAATTGCGTCTATCAGAAGAAAAATTTGCCCGCTTGTTTGATTCAG CACCGTTTCCGATGCTTATTGTACGGCTGGATGACAATCTGATCCTGAATGCTAACGCCGCTTGCCGCGAATTTTTTGAG TTAAGTAGTGATCAAATCATTAAGCAACACATTAACCGCCTCGATTGGTCACAATTACCCAGCCGCTGGCAGGCTATCGC CGATACATTACGCCAGGAAGGAACGGTTAGTGAGGTTGAATTCAGTTTTTGTCGGCGCGATGGCTCAACCTGCTACACCC AATTGACTGCCGAGATTGTCGAATTACAGGAAGGGTTGTGTGCGGTCGTCGCATTTCAAGACGTAACACCGTTGCGTCGT GCCAATGAACGACTGATTGAGCTGGCAAGCCAGCAAGAACAACTGGCAACGCTGGCACGAGAAGCACTCGCGAGTACCGA TTTGAATACTCTCTTTGCGGTGGCAGCCGAACAAATGGTACAGGCGTTGCCGATAAGCGGTGTTGAATTCATCGATGTCG ATATTGATGGAAACATCACCATCCGCAACACCTGGGGCGAGGTACCCGCCCAACCTGTACCGGAGAGATTCTTTCAAGGG CTGACGGTGGATCATCCGGGCTGGAGTAATCTGCCGGCTCCATTAGCGGAACGGGCTGCCGATGTCGCGCAGCACGGTGC TGTGATGCTGATCGGCGGGCACCAGCGTCTCTTTGGTGCTCTGCTGGTGTACACATCGACGGCGCTTGATGCTGAGGCTA TCTTCTTCTTACGCAGCGTGGCAAATGTGCTGGCAGTTGCCCTGGAGCGCTTCCACGCCGAACAGGAGCGACGTCAGATC GAGAGCCAGATGCTTCAGACGCAAAAGCTGGAAAGTCTAGGCTTGCTGGCCGGTGGGATTGCCCACGATTTCAACAATCT GCTAACCGGCATTATGGGACATACCAGTCTGGCCTTGATCGATCTCCCTCCGAACCACGAGCTACAACCGCATCTGGCGG CCATCGACCAGGCTGCACAGCGAGCGGCTGAGCTGTGTCATCAATTACTGGTCTATGCTGGACGCGGCCAACGCTCGCTT GAAGTGGTAGACCTCTCGAATCTGGTGCGCGAAATGGGGAATATTCTACGTTTACCGACAAACCGGAGTCATCAGGTCGC TATTCACTACGATTTGGACACCAATCTCCCACCGATTTTGGTTGAGGCGAGTCAGATTCGGCAGGTTGTGCTTAATCTGC TCACCAATGCGATTGAGGCGATTGGTGAGCGTAGTGGGTCGGTTACGCTGCGGACTGGGGTCGCGAGTCTCAGTGCAGCA GACCTGCGCCGGCTGCGGCTAATGCCGACAATTCCACCGGGTGACTACGTAACGCTAACGGTGAGCGATACCGGCATAGG TATGGACGAAGCAACCCTGCGGCGCATTTTCGATCCCTTCTTCAGTACCAAACCGAAGGGCCATGGTCTTGGCCTTGCGG CTGTACAGGGAATCGTCCGACGCCACAATGGCGCGATTCGGGTTGAGAGTACGCCAGGATTGGGGTCAACCTTTACCGTG TATCTCCCGGCAGCCCACCAGGCTACCCCGGTAGTCACGACCAATGCAACGATGCCCATTGTACTGCGCGGCACCGCGCT GATCGTCGATGACGATCCGGCAATACGGGCCACGCTGAACCGCATCCTGGAACGGGCCGGCATGGTCACCACGGAGGCTG CCAATGGTCAGGCAGCGCTGAGTATGCTGACCGAGTCGGCGCTGAGCATTGACATTGCCCTGGTTGATCTGGCAATGCCG GGTATGAATGGGCTGGAACTGCTGGCAGCGATTCGTCGCCGTATGCCCCAATTACCGGTCTTGCTGATGAGCGGGAATGC CGGCGAAGTGACGAAAGATAACTTGCCTCTGGATCACTACACCGATTTTTTACCCAAACCGTACCGGTCACGCGATCTGC TGGAAAAAATGAGCACGTTGTTACAGCGAGTAGCGGCATTGCGTATCCACGGTAGTTGA
Upstream 100 bases:
>100_bases TCTGAACAAGACACGTAGGTTACCCAACCGATCACCACTGAAGGTGGATCGACGGCAGTCTGCATCACGATATTCCGCTG CTTCATGCAGGAGGGTATTC
Downstream 100 bases:
>100_bases GGTCTGGGCAAACGTGGCTTCCGCGTGCAGAGGATGGTGCCAGGCACCATGCGCGCCGGAGGCGTGCGCTCCCTGAGGAG ATAGGAGAGGTGTCGTGCGC
Product: multi-sensor hybrid histidine kinase
Products: NA
Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]
Number of amino acids: Translated: 872; Mature: 871
Protein sequence:
>872_residues MAAVSDPPSPSAKTYLRDHSIQLLRDLIWISLIAALAYTIFSPIDPSLMPQRMVVVVPLILGLLGAWWLIQRQYLRLASI LVISILWLVLAFSAFISGGLQAPAFAGIPLVVIMAGILLGWCGALTIALLSIGTGALFVRFADLLPPPPVFHSPLVWFIT YTLYLLLATRMISQIVTHFYQSMQETDKELSERKAVEQQLRLSEEKFARLFDSAPFPMLIVRLDDNLILNANAACREFFE LSSDQIIKQHINRLDWSQLPSRWQAIADTLRQEGTVSEVEFSFCRRDGSTCYTQLTAEIVELQEGLCAVVAFQDVTPLRR ANERLIELASQQEQLATLAREALASTDLNTLFAVAAEQMVQALPISGVEFIDVDIDGNITIRNTWGEVPAQPVPERFFQG LTVDHPGWSNLPAPLAERAADVAQHGAVMLIGGHQRLFGALLVYTSTALDAEAIFFLRSVANVLAVALERFHAEQERRQI ESQMLQTQKLESLGLLAGGIAHDFNNLLTGIMGHTSLALIDLPPNHELQPHLAAIDQAAQRAAELCHQLLVYAGRGQRSL EVVDLSNLVREMGNILRLPTNRSHQVAIHYDLDTNLPPILVEASQIRQVVLNLLTNAIEAIGERSGSVTLRTGVASLSAA DLRRLRLMPTIPPGDYVTLTVSDTGIGMDEATLRRIFDPFFSTKPKGHGLGLAAVQGIVRRHNGAIRVESTPGLGSTFTV YLPAAHQATPVVTTNATMPIVLRGTALIVDDDPAIRATLNRILERAGMVTTEAANGQAALSMLTESALSIDIALVDLAMP GMNGLELLAAIRRRMPQLPVLLMSGNAGEVTKDNLPLDHYTDFLPKPYRSRDLLEKMSTLLQRVAALRIHGS
Sequences:
>Translated_872_residues MAAVSDPPSPSAKTYLRDHSIQLLRDLIWISLIAALAYTIFSPIDPSLMPQRMVVVVPLILGLLGAWWLIQRQYLRLASI LVISILWLVLAFSAFISGGLQAPAFAGIPLVVIMAGILLGWCGALTIALLSIGTGALFVRFADLLPPPPVFHSPLVWFIT YTLYLLLATRMISQIVTHFYQSMQETDKELSERKAVEQQLRLSEEKFARLFDSAPFPMLIVRLDDNLILNANAACREFFE LSSDQIIKQHINRLDWSQLPSRWQAIADTLRQEGTVSEVEFSFCRRDGSTCYTQLTAEIVELQEGLCAVVAFQDVTPLRR ANERLIELASQQEQLATLAREALASTDLNTLFAVAAEQMVQALPISGVEFIDVDIDGNITIRNTWGEVPAQPVPERFFQG LTVDHPGWSNLPAPLAERAADVAQHGAVMLIGGHQRLFGALLVYTSTALDAEAIFFLRSVANVLAVALERFHAEQERRQI ESQMLQTQKLESLGLLAGGIAHDFNNLLTGIMGHTSLALIDLPPNHELQPHLAAIDQAAQRAAELCHQLLVYAGRGQRSL EVVDLSNLVREMGNILRLPTNRSHQVAIHYDLDTNLPPILVEASQIRQVVLNLLTNAIEAIGERSGSVTLRTGVASLSAA DLRRLRLMPTIPPGDYVTLTVSDTGIGMDEATLRRIFDPFFSTKPKGHGLGLAAVQGIVRRHNGAIRVESTPGLGSTFTV YLPAAHQATPVVTTNATMPIVLRGTALIVDDDPAIRATLNRILERAGMVTTEAANGQAALSMLTESALSIDIALVDLAMP GMNGLELLAAIRRRMPQLPVLLMSGNAGEVTKDNLPLDHYTDFLPKPYRSRDLLEKMSTLLQRVAALRIHGS >Mature_871_residues AAVSDPPSPSAKTYLRDHSIQLLRDLIWISLIAALAYTIFSPIDPSLMPQRMVVVVPLILGLLGAWWLIQRQYLRLASIL VISILWLVLAFSAFISGGLQAPAFAGIPLVVIMAGILLGWCGALTIALLSIGTGALFVRFADLLPPPPVFHSPLVWFITY TLYLLLATRMISQIVTHFYQSMQETDKELSERKAVEQQLRLSEEKFARLFDSAPFPMLIVRLDDNLILNANAACREFFEL SSDQIIKQHINRLDWSQLPSRWQAIADTLRQEGTVSEVEFSFCRRDGSTCYTQLTAEIVELQEGLCAVVAFQDVTPLRRA NERLIELASQQEQLATLAREALASTDLNTLFAVAAEQMVQALPISGVEFIDVDIDGNITIRNTWGEVPAQPVPERFFQGL TVDHPGWSNLPAPLAERAADVAQHGAVMLIGGHQRLFGALLVYTSTALDAEAIFFLRSVANVLAVALERFHAEQERRQIE SQMLQTQKLESLGLLAGGIAHDFNNLLTGIMGHTSLALIDLPPNHELQPHLAAIDQAAQRAAELCHQLLVYAGRGQRSLE VVDLSNLVREMGNILRLPTNRSHQVAIHYDLDTNLPPILVEASQIRQVVLNLLTNAIEAIGERSGSVTLRTGVASLSAAD LRRLRLMPTIPPGDYVTLTVSDTGIGMDEATLRRIFDPFFSTKPKGHGLGLAAVQGIVRRHNGAIRVESTPGLGSTFTVY LPAAHQATPVVTTNATMPIVLRGTALIVDDDPAIRATLNRILERAGMVTTEAANGQAALSMLTESALSIDIALVDLAMPG MNGLELLAAIRRRMPQLPVLLMSGNAGEVTKDNLPLDHYTDFLPKPYRSRDLLEKMSTLLQRVAALRIHGS
Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=305, Percent_Identity=30.8196721311475, Blast_Score=125, Evalue=2e-29, Organism=Escherichia coli, GI1788549, Length=259, Percent_Identity=33.2046332046332, Blast_Score=120, Evalue=4e-28, Organism=Escherichia coli, GI48994928, Length=373, Percent_Identity=24.6648793565684, Blast_Score=96, Evalue=8e-21, Organism=Escherichia coli, GI1788713, Length=236, Percent_Identity=28.3898305084746, Blast_Score=94, Evalue=4e-20, Organism=Escherichia coli, GI1790300, Length=285, Percent_Identity=28.4210526315789, Blast_Score=85, Evalue=2e-17, Organism=Escherichia coli, GI87081816, Length=381, Percent_Identity=25.9842519685039, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI145693157, Length=310, Percent_Identity=25.1612903225806, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1790299, Length=106, Percent_Identity=38.6792452830189, Blast_Score=73, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 95601; Mature: 95470
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAVSDPPSPSAKTYLRDHSIQLLRDLIWISLIAALAYTIFSPIDPSLMPQRMVVVVPLI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH LGLLGAWWLIQRQYLRLASILVISILWLVLAFSAFISGGLQAPAFAGIPLVVIMAGILLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH WCGALTIALLSIGTGALFVRFADLLPPPPVFHSPLVWFITYTLYLLLATRMISQIVTHFY HHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QSMQETDKELSERKAVEQQLRLSEEKFARLFDSAPFPMLIVRLDDNLILNANAACREFFE HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEECCCEEECCCHHHHHHHH LSSDQIIKQHINRLDWSQLPSRWQAIADTLRQEGTVSEVEFSFCRRDGSTCYTQLTAEIV CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHH ELQEGLCAVVAFQDVTPLRRANERLIELASQQEQLATLAREALASTDLNTLFAVAAEQMV HHHCCCEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH QALPISGVEFIDVDIDGNITIRNTWGEVPAQPVPERFFQGLTVDHPGWSNLPAPLAERAA HHCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHH DVAQHGAVMLIGGHQRLFGALLVYTSTALDAEAIFFLRSVANVLAVALERFHAEQERRQI HHHHCCCEEEECCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ESQMLQTQKLESLGLLAGGIAHDFNNLLTGIMGHTSLALIDLPPNHELQPHLAAIDQAAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHH RAAELCHQLLVYAGRGQRSLEVVDLSNLVREMGNILRLPTNRSHQVAIHYDLDTNLPPIL HHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHEEECCCCCCCEEEEEEECCCCCCCCE VEASQIRQVVLNLLTNAIEAIGERSGSVTLRTGVASLSAADLRRLRLMPTIPPGDYVTLT ECHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCEEEEE VSDTGIGMDEATLRRIFDPFFSTKPKGHGLGLAAVQGIVRRHNGAIRVESTPGLGSTFTV EECCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCEEEE YLPAAHQATPVVTTNATMPIVLRGTALIVDDDPAIRATLNRILERAGMVTTEAANGQAAL EEECCCCCCCEEEECCCCEEEEECEEEEECCCCHHHHHHHHHHHHCCCEEEECCCCHHHH SMLTESALSIDIALVDLAMPGMNGLELLAAIRRRMPQLPVLLMSGNAGEVTKDNLPLDHY HHHHHHHHHHHHEEEEHHCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHH TDFLPKPYRSRDLLEKMSTLLQRVAALRIHGS HHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AAVSDPPSPSAKTYLRDHSIQLLRDLIWISLIAALAYTIFSPIDPSLMPQRMVVVVPLI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH LGLLGAWWLIQRQYLRLASILVISILWLVLAFSAFISGGLQAPAFAGIPLVVIMAGILLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH WCGALTIALLSIGTGALFVRFADLLPPPPVFHSPLVWFITYTLYLLLATRMISQIVTHFY HHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QSMQETDKELSERKAVEQQLRLSEEKFARLFDSAPFPMLIVRLDDNLILNANAACREFFE HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEECCCEEECCCHHHHHHHH LSSDQIIKQHINRLDWSQLPSRWQAIADTLRQEGTVSEVEFSFCRRDGSTCYTQLTAEIV CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHH ELQEGLCAVVAFQDVTPLRRANERLIELASQQEQLATLAREALASTDLNTLFAVAAEQMV HHHCCCEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH QALPISGVEFIDVDIDGNITIRNTWGEVPAQPVPERFFQGLTVDHPGWSNLPAPLAERAA HHCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHH DVAQHGAVMLIGGHQRLFGALLVYTSTALDAEAIFFLRSVANVLAVALERFHAEQERRQI HHHHCCCEEEECCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ESQMLQTQKLESLGLLAGGIAHDFNNLLTGIMGHTSLALIDLPPNHELQPHLAAIDQAAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHH RAAELCHQLLVYAGRGQRSLEVVDLSNLVREMGNILRLPTNRSHQVAIHYDLDTNLPPIL HHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHEEECCCCCCCEEEEEEECCCCCCCCE VEASQIRQVVLNLLTNAIEAIGERSGSVTLRTGVASLSAADLRRLRLMPTIPPGDYVTLT ECHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCEEEEE VSDTGIGMDEATLRRIFDPFFSTKPKGHGLGLAAVQGIVRRHNGAIRVESTPGLGSTFTV EECCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCEEEE YLPAAHQATPVVTTNATMPIVLRGTALIVDDDPAIRATLNRILERAGMVTTEAANGQAAL EEECCCCCCCEEEECCCCEEEEECEEEEECCCCHHHHHHHHHHHHCCCEEEECCCCHHHH SMLTESALSIDIALVDLAMPGMNGLELLAAIRRRMPQLPVLLMSGNAGEVTKDNLPLDHY HHHHHHHHHHHHEEEEHHCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHH TDFLPKPYRSRDLLEKMSTLLQRVAALRIHGS HHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA