| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526988
Identifier: 222526988
GI number: 222526988
Start: 4686089
End: 4687231
Strand: Direct
Name: 222526988
Synonym: Chy400_3766
Alternate gene names: NA
Gene position: 4686089-4687231 (Clockwise)
Preceding gene: 222526986
Following gene: 222526989
Centisome position: 88.94
GC content: 63.25
Gene sequence:
>1143_bases ATGCCCATCTCGTACCGCGAGCAGGCCCAATTAACATGCCCACACTGTGGCGGTGATTTTGATGCTGAAGTCTGGTTGAT TGTTGATGCTGATGAGGAGCCGGAAGCGGCAGCGGCGCTGCGACGCGAAGAGCTGAATCTGGTGGAGTGTCCGCATTGCG GTGCGCGTGGGCCGGCGGGAGCGCCGCTGCTGTACCACGATGCCCGTGCCCGCCGGGTGATCTTTACACCTGCCCCCGGC TCAACCGATCATGAGATTCGCGATCAGGCACGCGATCTGCACGCCCTGCTGGTCGGTTCGATTGACCAGGAGCAGCGCCG TCCGTACCTCACCGATGTTGATATTACCCAGGATATGAGCGGCCTGGCCCTGCTGCTGCGACGCCTCGATGCCCGTCGTG CTACGACGCCACCGCCGCCAACACCGCCAACACCGCCACCATCGCCAGCGGCAGAGCCGCCACCACTCCTCGCTGCGGTC GAAGCCTTGCTGGCCGCCGACACCGATGCCGAACTGGAACGAGTGCTGGCGCAGCACCCGGAATTGCTCGAACCGTCGGC CCTGGCGACGCTCACCCAGTTGGCCGAGGTTGCGGTTGCCCAGGGTGAGCACGAGATCGCGCAGGGCTTACGCAACGCCC GTGAGTTGCTGGCCCGCATGCAGCCACGCCCGGCACCTGAACAGTTGACGGCGATCCCACCTGCTGCGCTGCAAGAGCTG CTTAATGCGCACAGCGATGCCGAACTCGAACAGGTGATTGCCCGCCATCCACTGTTGCTGCGCCCCGAAATCGATCAGTT GCTGGAAGGTGAGATCGAAACAGCCCTGGCATCCGGTGCGGATCGGCTGGCACAGTTGCTGGCGAGTCGGCGCGAGATGC TGGTGGCATTCCGTACTGCACCAACGCCGGATGCCGATCTGGAGGAAGCGATTGAGGCGCTGCTGGTTGCCGACGACGAA GAGACGATAGCACAGGTGCTCGATCAATATCCGCTGCTGTTGAGCGAGGCTGCCGAACAGGCACTTTGGGAATTTGCGTC TGAAGCACGGGCCGGTGGCGATGACGAGCTGGCTCGCCACGCGATTGCCTGTCGTGAAATGTTGCGCCGTGTGCGCGCCG GATTGGAAGAAGGCCATTCATAG
Upstream 100 bases:
>100_bases CACCGCAAAACGGCAGGCGCCTGCTCGCCATTCGACTGCGTGACTGATGGTACAATACAGCGAGAAGGATATGTGCTGAT CGGCAAGGGTGCAGAAGATT
Downstream 100 bases:
>100_bases CTGATGGGAATGGGTATGCTGAAACGAACTCCTCTTTACAATGCGCACCTGGCAATGGGCGCGCGCATGGTCGAATTTGG CGGCTGGGAGATGCCAGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 380; Mature: 379
Protein sequence:
>380_residues MPISYREQAQLTCPHCGGDFDAEVWLIVDADEEPEAAAALRREELNLVECPHCGARGPAGAPLLYHDARARRVIFTPAPG STDHEIRDQARDLHALLVGSIDQEQRRPYLTDVDITQDMSGLALLLRRLDARRATTPPPPTPPTPPPSPAAEPPPLLAAV EALLAADTDAELERVLAQHPELLEPSALATLTQLAEVAVAQGEHEIAQGLRNARELLARMQPRPAPEQLTAIPPAALQEL LNAHSDAELEQVIARHPLLLRPEIDQLLEGEIETALASGADRLAQLLASRREMLVAFRTAPTPDADLEEAIEALLVADDE ETIAQVLDQYPLLLSEAAEQALWEFASEARAGGDDELARHAIACREMLRRVRAGLEEGHS
Sequences:
>Translated_380_residues MPISYREQAQLTCPHCGGDFDAEVWLIVDADEEPEAAAALRREELNLVECPHCGARGPAGAPLLYHDARARRVIFTPAPG STDHEIRDQARDLHALLVGSIDQEQRRPYLTDVDITQDMSGLALLLRRLDARRATTPPPPTPPTPPPSPAAEPPPLLAAV EALLAADTDAELERVLAQHPELLEPSALATLTQLAEVAVAQGEHEIAQGLRNARELLARMQPRPAPEQLTAIPPAALQEL LNAHSDAELEQVIARHPLLLRPEIDQLLEGEIETALASGADRLAQLLASRREMLVAFRTAPTPDADLEEAIEALLVADDE ETIAQVLDQYPLLLSEAAEQALWEFASEARAGGDDELARHAIACREMLRRVRAGLEEGHS >Mature_379_residues PISYREQAQLTCPHCGGDFDAEVWLIVDADEEPEAAAALRREELNLVECPHCGARGPAGAPLLYHDARARRVIFTPAPGS TDHEIRDQARDLHALLVGSIDQEQRRPYLTDVDITQDMSGLALLLRRLDARRATTPPPPTPPTPPPSPAAEPPPLLAAVE ALLAADTDAELERVLAQHPELLEPSALATLTQLAEVAVAQGEHEIAQGLRNARELLARMQPRPAPEQLTAIPPAALQELL NAHSDAELEQVIARHPLLLRPEIDQLLEGEIETALASGADRLAQLLASRREMLVAFRTAPTPDADLEEAIEALLVADDEE TIAQVLDQYPLLLSEAAEQALWEFASEARAGGDDELARHAIACREMLRRVRAGLEEGHS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41323; Mature: 41192
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPISYREQAQLTCPHCGGDFDAEVWLIVDADEEPEAAAALRREELNLVECPHCGARGPAG CCCCCCCCCCEECCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCEEECCCCCCCCCCC APLLYHDARARRVIFTPAPGSTDHEIRDQARDLHALLVGSIDQEQRRPYLTDVDITQDMS CCEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHH GLALLLRRLDARRATTPPPPTPPTPPPSPAAEPPPLLAAVEALLAADTDAELERVLAQHP HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCC ELLEPSALATLTQLAEVAVAQGEHEIAQGLRNARELLARMQPRPAPEQLTAIPPAALQEL CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHH LNAHSDAELEQVIARHPLLLRPEIDQLLEGEIETALASGADRLAQLLASRREMLVAFRTA HHCCCCHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PTPDADLEEAIEALLVADDEETIAQVLDQYPLLLSEAAEQALWEFASEARAGGDDELARH CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH AIACREMLRRVRAGLEEGHS HHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PISYREQAQLTCPHCGGDFDAEVWLIVDADEEPEAAAALRREELNLVECPHCGARGPAG CCCCCCCCCEECCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCEEECCCCCCCCCCC APLLYHDARARRVIFTPAPGSTDHEIRDQARDLHALLVGSIDQEQRRPYLTDVDITQDMS CCEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHH GLALLLRRLDARRATTPPPPTPPTPPPSPAAEPPPLLAAVEALLAADTDAELERVLAQHP HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCC ELLEPSALATLTQLAEVAVAQGEHEIAQGLRNARELLARMQPRPAPEQLTAIPPAALQEL CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHH LNAHSDAELEQVIARHPLLLRPEIDQLLEGEIETALASGADRLAQLLASRREMLVAFRTA HHCCCCHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PTPDADLEEAIEALLVADDEETIAQVLDQYPLLLSEAAEQALWEFASEARAGGDDELARH CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH AIACREMLRRVRAGLEEGHS HHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA