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The map label for this gene is ubiA [H]

Identifier: 222526910

GI number: 222526910

Start: 4600123

End: 4601025

Strand: Reverse

Name: ubiA [H]

Synonym: Chy400_3688

Alternate gene names: 222526910

Gene position: 4601025-4600123 (Counterclockwise)

Preceding gene: 222526911

Following gene: 222526909

Centisome position: 87.32

GC content: 56.48

Gene sequence:

>903_bases
ATGCGCAAACAGCTACGCCTGCTCATTGAATTTGCCCGTCCCCACACCGTCATTGCTACCAGCGTCCAGGTTCTGACCAT
GCTGATCATCGTGATCGGCTGGCACCCACCAACGCTCGAACTGGTGGGACTGGTCGGGGTGACGCTCGTTGTCTGTCTGG
CGCTCAATCTCTACGTAGTCGGCGTGAATCAACTGACCGATGTGGCGATTGATCGGATCAACAAGCCATGGCTACCGGTT
GCTGCCGGTCAGCTTTCATCGGATGCTGCGCAACGTATTGTTATCAGTGCCCTGTTTATTGCCCTGACCGGTGCGGCTAT
GCTCGGCCCACCGCTCTGGTGGACGGTGAGTATCATCGCGCTGATCGGTTCACTCTACTCGCTCCCCCCGCTGCGCTTGA
AGCGTCATCCCCTCGCTGCGGCCCTCAGTATTGCCGGTGCCCGCGGGGTGATTGCCAATCTCGGCCTGGCCTTCCACTAT
CAGTACTGGTTAGATAGCGAATTGCCGATCACGACCCTGATCCTGGTGGCAACCTTCTTTTTCGGTTTCGCTATGGTGAT
CGCGCTCTATAAAGACTTGCCCGATGATCGCGGTGATCGGTTGTATCAGATCGAGACCCTGACCACGCGCCTCGGCCCGC
AGCGAGTGCTGCACCTGGGCAGAATCTTGCTCACCGCCTGTTATCTGCTTCCGATTGCCGTCGGTCTCTGGTCGCTGCCG
ACTTTTGCCGCCGCGTTCCTGGCCCTCAGCCATGTGGTCGTTATCAGTGTTTTCTGGCTGGTCAGTATGCGCGTTGATCT
GCAACGCCGGCAATCGATTGCCAGTTTTTATATGTTTCTGTGGGGGATTTTTTATACCGAATTTGCCCTGCTTAGCATTT
ATCGTCTGACGTATACCCTCTGA

Upstream 100 bases:

>100_bases
CTTCAGCGTATTATAGAGATAGCAGAATCTTTAGATTTCAAGTTTTTATCTAAAACATTATTCGTTCGGTTTGCAACTGA
ACGAACACGACGGTTCTCGC

Downstream 100 bases:

>100_bases
TGATGAGATGGCTTCACCCAATCCTGGCGCTGATCCGGCTTGGCCGCCCCCTGCATCTCATCGGCGGTGCGATCTTCTAC
GGGGTGGGTGTTGCTGCCGC

Product: tocopherol phytyltransferase

Products: NA

Alternate protein names: DGGGP synthase; DGGGPS; (S)-2,3-di-O-geranylgeranylglyceryl phosphate synthase; Geranylgeranylglycerol-phosphate geranylgeranyltransferase [H]

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MRKQLRLLIEFARPHTVIATSVQVLTMLIIVIGWHPPTLELVGLVGVTLVVCLALNLYVVGVNQLTDVAIDRINKPWLPV
AAGQLSSDAAQRIVISALFIALTGAAMLGPPLWWTVSIIALIGSLYSLPPLRLKRHPLAAALSIAGARGVIANLGLAFHY
QYWLDSELPITTLILVATFFFGFAMVIALYKDLPDDRGDRLYQIETLTTRLGPQRVLHLGRILLTACYLLPIAVGLWSLP
TFAAAFLALSHVVVISVFWLVSMRVDLQRRQSIASFYMFLWGIFYTEFALLSIYRLTYTL

Sequences:

>Translated_300_residues
MRKQLRLLIEFARPHTVIATSVQVLTMLIIVIGWHPPTLELVGLVGVTLVVCLALNLYVVGVNQLTDVAIDRINKPWLPV
AAGQLSSDAAQRIVISALFIALTGAAMLGPPLWWTVSIIALIGSLYSLPPLRLKRHPLAAALSIAGARGVIANLGLAFHY
QYWLDSELPITTLILVATFFFGFAMVIALYKDLPDDRGDRLYQIETLTTRLGPQRVLHLGRILLTACYLLPIAVGLWSLP
TFAAAFLALSHVVVISVFWLVSMRVDLQRRQSIASFYMFLWGIFYTEFALLSIYRLTYTL
>Mature_300_residues
MRKQLRLLIEFARPHTVIATSVQVLTMLIIVIGWHPPTLELVGLVGVTLVVCLALNLYVVGVNQLTDVAIDRINKPWLPV
AAGQLSSDAAQRIVISALFIALTGAAMLGPPLWWTVSIIALIGSLYSLPPLRLKRHPLAAALSIAGARGVIANLGLAFHY
QYWLDSELPITTLILVATFFFGFAMVIALYKDLPDDRGDRLYQIETLTTRLGPQRVLHLGRILLTACYLLPIAVGLWSLP
TFAAAFLALSHVVVISVFWLVSMRVDLQRRQSIASFYMFLWGIFYTEFALLSIYRLTYTL

Specific function: Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesi

COG id: COG0382

COG function: function code H; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiA prenyltransferase family. DGGGP synthase subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000537 [H]

Pfam domain/function: PF01040 UbiA [H]

EC number: =2.5.1.42 [H]

Molecular weight: Translated: 33327; Mature: 33327

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKQLRLLIEFARPHTVIATSVQVLTMLIIVIGWHPPTLELVGLVGVTLVVCLALNLYVV
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC
GVNQLTDVAIDRINKPWLPVAAGQLSSDAAQRIVISALFIALTGAAMLGPPLWWTVSIIA
CHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
LIGSLYSLPPLRLKRHPLAAALSIAGARGVIANLGLAFHYQYWLDSELPITTLILVATFF
HHHHHHCCCCHHHHCCHHHHHHHHHCHHHHHHHHHHHHEEHHHCCCCCCHHHHHHHHHHH
FGFAMVIALYKDLPDDRGDRLYQIETLTTRLGPQRVLHLGRILLTACYLLPIAVGLWSLP
HHHHHHHHHHHHCCCCCCCCEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFAAAFLALSHVVVISVFWLVSMRVDLQRRQSIASFYMFLWGIFYTEFALLSIYRLTYTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRKQLRLLIEFARPHTVIATSVQVLTMLIIVIGWHPPTLELVGLVGVTLVVCLALNLYVV
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC
GVNQLTDVAIDRINKPWLPVAAGQLSSDAAQRIVISALFIALTGAAMLGPPLWWTVSIIA
CHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
LIGSLYSLPPLRLKRHPLAAALSIAGARGVIANLGLAFHYQYWLDSELPITTLILVATFF
HHHHHHCCCCHHHHCCHHHHHHHHHCHHHHHHHHHHHHEEHHHCCCCCCHHHHHHHHHHH
FGFAMVIALYKDLPDDRGDRLYQIETLTTRLGPQRVLHLGRILLTACYLLPIAVGLWSLP
HHHHHHHHHHHHCCCCCCCCEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFAAAFLALSHVVVISVFWLVSMRVDLQRRQSIASFYMFLWGIFYTEFALLSIYRLTYTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10701121; 11427726 [H]